Array 1 41724-44935 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027528.1 Acinetobacter baumannii strain AR_0083 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 41724 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 41784 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 41844 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 41904 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 41964 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 42024 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 42084 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 42144 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 42204 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 42264 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 42324 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 42384 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 42444 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 42504 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 42564 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 42624 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 42684 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 42744 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 42804 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 42864 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 42924 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 42984 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 43044 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 43104 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 43164 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 43224 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 43284 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 43344 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 43404 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 43464 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 43524 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 43584 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 43644 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 43704 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 43764 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 43824 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 43884 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 43945 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 44005 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 44065 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 44125 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 44185 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 44245 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 44305 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 44365 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 44426 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 44486 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 44546 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 44606 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 44666 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 44726 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 44786 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 44846 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 44906 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //