Array 1 3332373-3332711 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023690.1 Streptomyces spectabilis strain ATCC 27465 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 3332373 29 100.0 32 ............................. TGGTCCCACGGTGAATCCGGGACCATCTCGAA 3332434 29 100.0 32 ............................. GCCGGAACTCCGACCCCCGGAACGAAGTCGGA 3332495 29 100.0 32 ............................. GGACATCCGCGGCCCGCTTCGCCTCGCGCTCC 3332556 29 100.0 32 ............................. TCGAAGGGGCAGCAGAGCGTGGACACCGTGCT 3332617 29 100.0 38 ............................. AGCCCCTTCACCTTCACCTTCACGAAGATGATCGCCGC 3332684 28 79.3 0 ....-.............A.....CG.AG | ========== ====== ====== ====== ============================= ====================================== ================== 6 29 96.5 33 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : TGAAGTGCCGCTGGTCGGCGCGCGTGTGGCTGGATGTGGGCGTGAAGGGCCCGGCGGGCTTGCGCGCGGGGCGGTGGGGCGCTCCAGCCCAGCGAAAAGGCCCGCGGAGTGACGTTTCCGCAGGCCAGATCGATTCTGCTTCGGTATCCCAGAGGGTAACCGCAACAGCTGCTGAACTCGACCCAGTTGCGACTACGAAGAGTAGCCACCCAGAAGGAACGTCGTGAGCTGCTTGACGCGGTGGCGACAGAAACGCGCCGAGGGGGAACCATCTGCGACACGGGGACACTCCCAGCCCTGCCGATGCCGCCCCAACCAAGGCTCACGCGGACGCGTCTCTACAGTCGGGGCTCCAGCGCGAGTTCGTCGCCTGGATGTTGTAATTGGAGAGGGAATTGCGCTACATGAAGGTGATTTGTTCGCATCAGGATGGAATGCCGCTTTCTCAAGAAGTAAGGGAAAATCCACTGTCGAGCGCGTAGAGCCGCAGGTCGCGGCCT # Right flank : GAGCTCATCGAGGCTCTGGGGAGGCTCTGCGCGGCCGCTGCCTTCACTCCTCACCCGTGGAGCGGCGGCCAAGGCGAGCGCCAGGTGTCACGTGGCAGTCAGCCCTGCGGCCGCGGCCAGTTCGCGTACGCCCGGTGTCCGTGGGTGTTTGGTCCGCAGGTCGGAGATGATGGTCCGGATCGCGAGGCGGTCGCGTACCTCGCCCGGCGAGACCCGGGCGGCCGAGAGTAGCTCCGTCGCCGTCTGTTCAGGCTTGCCCCACTGCCACCACGCGCGGCCGAGGTCGGTGTGCAGCCTGGCTTTGCGCTCGGGCGTCCTGAAGTGGCCGGGGTGCAGGCCACGACCCACGTCGAGAGCCGTACCCGCGTCGCCGAGTGCCCAGTGCACGCCGACCGCGTACAGGTCGACGGCGGCCGGCGTAAGGGGGAACAGTCGCTCGGCCGGAGACTCGTCGGGGAGGCTGCGGGCGGCGCGGCGGGCCTCTGTGATCATGACGAGGG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 5544439-5543739 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023690.1 Streptomyces spectabilis strain ATCC 27465 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5544438 29 100.0 32 ............................. GCCGCCGCAGTGACGCCCCACGAGCCGATGTC 5544377 29 100.0 32 ............................. AACAGCACCATTCTTTCGTCCTGTTGCGCATT 5544316 29 100.0 32 ............................. GCCTCCCCGCGTTTCCGCCGCCGCGGCGGGCC 5544255 29 100.0 32 ............................. CCTGACGCTGGCCCAGGTGCTGGACCGGGCGG 5544194 29 100.0 32 ............................. GTCGACTTCGCAGGGAAGCCGCGAAGACCGTC 5544133 29 100.0 32 ............................. AGGGCGACACGGTTCACCGCGGTGGTCACCTC 5544072 29 100.0 32 ............................. CTCGCCGCCATCGAGGAGGCCTACCGCGCGGT 5544011 29 100.0 32 ............................. GTGCTCGTCTCTGGTGATCGCGCGATGTGCCG 5543950 29 100.0 32 ............................. AGAGCAATCGTCCCGCGGTGGGCGGCGCGGAC 5543889 29 100.0 32 ............................. CAGCGCACCGTGTGGCCGCCGGGGGCGTTGTA 5543828 29 96.6 32 ........................A.... GTCGCTCCGCCGCCGCGGGCCAGTTCATCCCA 5543767 29 89.7 0 ..........T..T.........A..... | ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.9 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GAGCGCGTTCTCTCCGAGCCGGATCAACTCCGCGTCTCTGTCGTCCAGGCCCGCCGCCCGGCACGCGGCAGTCATCACCCGCGTCGCCCCCGCCTCCATGAACCCCTTCTCCGACCCCTGACCAGCGTCAGCCGCCATGCCCGAACCAGCTCCCCTAGTCGCGCGCGATCAACTGGCGCCACGCCCACGGGTGACCAACCCGACGCCCGCCAGACGCGTCATCGACCGTACAGACCACACCACTTGGCCACGAGGGGGCGCCAAGACGACAAGCTGCTGCGAAACGGCCCCATAGCCGCTTGCCTTGGCCACTGCCGCGGCCATCTAGACCGCCTAACATCGACAGCAACCAAGGCTGCACCAGCCCCTGAGACAAGCGACCACCAACCGCCGTCGCATTAACGACTGTACGCATTCGCCATCGAATGACCCCAATGCCGCTATCTCAAGAAGTGAGTCAGAACTCCCCAGTCGCCTGACAAACCCCCAGGTCACCGCCT # Right flank : GAGCTGAGCGGCGAGCACAGCGAACCCGACTCGTGGTCCCCGCGCATACGGGCCCCCCAAGCCACACCCCGCCACACCGCCGAGCCCCGCGCCAAGACATCGGCGCGGGGCTCGCGGAAAGAGGTCGGGAGGCGTCAGGCGTTAGCCGGTACCACGTCCGGCTCGTCGATCGGCGAAGCCGAGGCGTGCTCGTACGCCTCCCGGTCGAGGATGTTCTCGCGCGCCGCGACCAGGACCGGGACCAGGGCCTGGCCCGCGACGTTCGTGGCCGTGCGCATCATGTCGAGCACCGGGTCGATGGCGAGCAGCAGGCCGACGCCCTCCATCGGCAGGCCGAGCGTGGACAGGGTCAGGGTCAGCATGACCGTGGCGCCGGTGAGGCCTGCGGTGGCGGCGGAGCCGACGACCGAGACGAAGGCGATCAGGAGGTACTCCTTGATGCCCATGTTCACGTCGAAGATCTGCGCGACGAAGATCGCGGCGATCGCCGGGTAGATCGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 5546506-5545867 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023690.1 Streptomyces spectabilis strain ATCC 27465 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5546505 29 100.0 32 ............................. CCCGGCTTGCCCGTGAACGTCACAGGCCAGGT 5546444 29 100.0 32 ............................. ATCACGGGGATGCCGTACGGATACTGCACCTC 5546383 29 93.1 32 .....................A......T GCGGCGAGCAGGACGCGGTGAAGCGTGTGCTG 5546322 29 96.6 32 .....................A....... TGGACCCGCAGCTCAGCCACGGGGTGTGCGCT 5546261 29 96.6 32 .....................A....... AGCCGAGCGCATGCAGCCCGCGAGCAGTTCAG 5546200 29 93.1 32 ...A................A........ TCCTCGCCCTCCTCGATCGGGTTCAGGCTCAT 5546139 29 100.0 32 ............................. TCGACCTGCCACTGGCCGCTGCTGGGGTACGC 5546078 29 100.0 32 ............................. ATCTGGCCGCAGACCGCGAAGTGACTGCCGGG 5546017 29 96.6 32 ..............G.............. CTGATCCCCCAGGTGCTCGCGCTCCGGGAAGG 5545956 29 100.0 32 ............................. GGGCAGGTCGGCGGCGAGTACTCCTCCCCCGG 5545895 29 93.1 0 .....................A...A... | ========== ====== ====== ====== ============================= ================================ ================== 11 29 97.2 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : AGCACGGACCCCCAGTACGCGCGCACCCTAGGCTTCTGCCGCATGGTCCTAGCCCAAAGCCAGCTAATGAGCGGCGAATTGGAGGCCGCCATCACAACAGCAAGCCTGGCGGTTGAGGCAGGCGACACCCTGCAGTCCTCTCGCTTCCAGCGATACGTCACCGACTTCCAGACAGAGGTGAGCGAGCACTCAGGCAACCCATCCGTTGCAGCCTTCAGTGAAAAAGTTCGCAACGCACTCGCTCGCTTGGACGACGACTGAGCCTCCACAGAGACGCCCAGCGCGGCTCGCCATCGCCACAGCTGAACAGCAATGGTTTTACTGTCGAGTTGGCCAGAAAGACGTAGCCTCATCGAGTCGTAAGGCTGCACCACCACAGCCCCCGCGCTAGCTCCGAACCGTGAGGTAATGGATGATTCACTCCAAATACTCGCAATGCCCGAGTCTCAAGAAGTGAGTAAAACCGCCCACCCGCCTGACGAACCCCCAGGTCACAGCCT # Right flank : ATAGTGGCCTCTCCCCCCTGGCCGAGGTTGAAGTGGCTCCCACGCATACGCGGTGGCTCCTTCGCGACAGCCCTAGCCTCTACACCCGGAGTGCGGATCCCACCGCGTGCCCATACCTCGCCAAGGGGTACGCCACACCGCCGTAGCCCTACCAGGGCCGCCAATCCCGAGGCCCATCGTCATCCCGCAGTGCCGCGATCCGGCGCCGGTACTCGTCCGCCACCCGCTCACTCACCCGCACGTTCTGCATGAGCCACGTCGTCATGTTGAACTCCTGCAGCCCGCGGAGCGTCGCGTAGCCCTCCCAGTCGTACAGGTCCCGCCCGTACGCGCCCACGAAGTCGGCGTACTGCTGCTCGGTCTGCCAGCCGAGGCTGTGGTGTTCCACGGACGTGACCATCAGGTCCCACTCCGGGTGGTCGAAGCAGAAGACTTCGAAGTCGATCAGGATCACGCGGCCTTGGACGTCCACCATGAGGTTCTGGACGTGGGCATCCCCG # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : GTGGTCCCCGCGCGTGCGGGGATGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //