Array 1 56248-57291 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCGP01000001.1 Lactobacillus helveticus strain IMAU30049 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 56248 32 100.0 35 ................................ TATCACAGAAAGCAACACTGCTACTTGGCATTCAA 56315 32 100.0 34 ................................ ATCATATGAACCACGAAGCTGGCCAATGATAGCC 56381 32 100.0 34 ................................ TAAGTGATTGTTGATACTCTCTCTGTTTACTGCC 56447 32 100.0 35 ................................ TTTCAAAGTGAGACAGTTAGCTGCTGATCTTACAA 56514 32 100.0 39 ................................ TCACACTTGGAGAAACTTCAATAGCAAGCTTATCCTCTG 56585 32 100.0 39 ................................ TCACACTTGGAGAAACTTCAATAGCAAGCTTATCCTCTG 56656 32 100.0 39 ................................ TCACTATGGACTCTGGTGATGTTTCCGAATAATCAAGCC 56727 32 100.0 34 ................................ TCACACCACTGGTTTAAGAACTTACTAGCTTGGG 56793 32 100.0 35 ................................ TCTAATTTATGTAGGGGATAAGATTAAGCTTACTG 56860 32 100.0 36 ................................ AGCATATGGAACGACAACCACGATACTTGTTAAGCC 56928 32 100.0 34 ................................ AACCAAGCACGCCACCAAGCAGCCGGTGCAAAGT 56994 32 100.0 34 ................................ AACCAAGCACGCCACCAAGCAGCCGGTGCAAAGT 57060 32 100.0 35 ................................ CTTAGCAGACCCGTCTGCACTAGTACTTGCATTAC 57127 32 100.0 34 ................................ CATTTGGTAGGGGCGTGTGGATAAATAGACAGCT 57193 32 100.0 35 ................................ AAAAAAGCTAAAACCGTTTTAATAAATAAAGGAAA 57260 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 16 32 100.0 36 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGTGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTTAGGTCCATTGCGCTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCGGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //