Array 1 1529346-1535487 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT719092.1 Cuniculiplasma divulgatum strain PM4 (=JCM 30641 chromosome I, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1529346 30 100.0 36 .............................. TGGTATCGTGGACATAGTTGTTGAAGAGGGTTATGT 1529412 30 100.0 37 .............................. TGGTTGCATTTATATTATCTTCGATGTAATTCTGTAG 1529479 30 100.0 37 .............................. CTTCATGACGATCCCTGGAGAATAGGAATTGACCTGA 1529546 30 100.0 37 .............................. TGGTTTTCAGTATTATTTTTTAAAAGGTAGTATAGAA 1529613 30 100.0 37 .............................. TCAAAATTAAAAAGGTGAAATAATAATGACTATTGAA 1529680 30 100.0 37 .............................. TTTTAAATGACGAATTTATGACATATATAGATTCCTA 1529747 30 100.0 37 .............................. TAATCAAATAATAAATAACACCGCTTTAACCGATACC 1529814 30 100.0 38 .............................. AAATTTCTCCTAAATGATCTATCCTTCCTTCTACCTAC 1529882 30 100.0 36 .............................. ATTTTCCCCTGCTCTAAAGTGAGTCCTGTCTTCTTC 1529948 30 100.0 37 .............................. TTCGATATATTCAACTAATAATACAAATGTATTAATT 1530015 30 100.0 36 .............................. ACTGAATATGAATTAGAACATTTAGACTTAATGGAA 1530081 30 100.0 36 .............................. AAGGTTTATTTCAGTTTTATTCTAATACGGGATTAG 1530147 30 100.0 36 .............................. GAGAAAAATTCTACATGCTGATTTGCATCAACCTTT 1530213 30 100.0 36 .............................. TTTGAAGAACATGAAATTTAATCCTGATCTTATGAG 1530279 30 100.0 36 .............................. AATAATATATATGTTGAAGATATTATTAAAAATGAA 1530345 30 100.0 36 .............................. AATCGTATTTTATTGAAGGTCAAAGAAAATACGGTT 1530411 30 100.0 36 .............................. TTGAAAAAATATCAAAACAAATATCCTAAAAATAAA 1530477 30 100.0 36 .............................. GACGATATCATTTTCGATCAGGTAGTCAAGATATCA 1530543 30 100.0 36 .............................. ACAAAGTTCTATGTCAGAAAGGATCTGTCAGATGCG 1530609 30 100.0 37 .............................. TTTGCAATTGGATACAGTGCAAGAATATGGGAAGAAA 1530676 30 100.0 36 .............................. GTGATATCTATTTTGGGATGAGTGTTAGAAAGGATA 1530742 30 100.0 36 .............................. TTATGAAATCTTATCATATGGCTATCAGCCATACTA 1530808 30 100.0 37 .............................. AAAAGCCAAAGGTGAAGAAGTGAACGTAACATTTCGT 1530875 30 100.0 37 .............................. GAGTTATAAACAAATCCGATATTGCCTATTTGGAAAG 1530942 30 100.0 37 .............................. TCCTCTATATACTTGGATTCTTTGATCTTGCAGCACT 1531009 30 100.0 37 .............................. GAATATTCAGGATCTTCAAACGGTAGCTTCATCTTCA 1531076 30 100.0 37 .............................. CCATATTTGGTATTTGGTGTTATAGAGAAATATATTC 1531143 30 100.0 38 .............................. AAGACAATGAGCCTATTATCAAAAAGGTGAAATAATAA 1531211 30 100.0 37 .............................. TTCGATATATTCAACTAATAATACAAATATAATTATT 1531278 30 100.0 35 .............................. CGGTAATTTAGGATCAGGTAAATCCTTTAGTATTT 1531343 30 100.0 37 .............................. TAATTATATCGTTAATGTTGAATATTGGAAAAATTCA 1531410 30 100.0 36 .............................. AAAAAATTCCTAATGATAAGAATGAGATTGTGATTG 1531476 30 100.0 36 .............................. CGACACTATAGGATATGCTAATAACCATAATTTATA 1531542 30 100.0 36 .............................. CATCATCAGTAATAATTTCACAATCTACAAATAATA 1531608 30 100.0 38 .............................. TTTTCAATCCTTCTTTACTGGGGCATTGGTTTCATAAT 1531676 30 100.0 37 .............................. TATCTCCATGAAACAATCTTTAGTTAAGCGGGAAAAA 1531743 30 100.0 36 .............................. AAGTAGCTATGGCTTTGATATTGGCTTTAGTAGTGA 1531809 30 100.0 37 .............................. TAACATCGATAACATATTCAAATGGAAATTTAATAAT 1531876 30 100.0 36 .............................. CCGTTCAGGACATTTTCGACGTAACGAAATCTAATA 1531942 30 100.0 38 .............................. ACAAAAAAGGTAAAGGAAAGAAAATAACACGAGCCAAA 1532010 30 100.0 36 .............................. CTATAACGGTGATCTTACAATAACAAATACAACAAC 1532076 30 100.0 36 .............................. TTGTGTCAAAAATAAAAACGATTTAAAAGAAATATT 1532142 30 100.0 37 .............................. ATATGTTCATAACCAATCTAATAATAATAGGATTGAA 1532209 30 100.0 36 .............................. TACCTCCCACTGGATACTCCCAACCGGATATATATG 1532275 30 100.0 37 .............................. TGGTTCCCGCTACCGCCGTTCCCTCTAATACCCCGAC 1532342 30 100.0 37 .............................. AAATGAGTGAAGAAGTAAACATGAGTGAAGAAGTTAA 1532409 30 100.0 37 .............................. TTAGAATAATAATTACCAAACCCTAAGTTTTGAACCG 1532476 30 100.0 38 .............................. AAGGTGATAAAATATGACTATGTTAGACGAATTAGTAA 1532544 30 100.0 37 .............................. TGACGAATTGGTTTTAGAAATGCAGGACGGGGAAATT 1532611 30 100.0 36 .............................. ATATTATTATGTAACGAATTAGAATTATTACTTACA 1532677 30 100.0 37 .............................. AGACCATAAGAGATCAACTGCAAAGACAACTCGTTAT 1532744 30 100.0 36 .............................. TCCTGACCTGTAAACTGAATCTCTAAGGGATAATCT 1532810 30 100.0 35 .............................. ATTACAACTAAATCTGTATCCATAATAAATCACTC 1532875 30 100.0 35 .............................. CATTGCAGGGCTAACAGGACCCACAATGTCAGGAG 1532940 30 100.0 36 .............................. CATATACAATCCAAACAAAAACAGCACAATTCCAAT 1533006 30 100.0 37 .............................. TGTACCGATTCTTCTTTAGCAAGGACCTTTCCACCCT 1533073 30 100.0 37 .............................. CTAATACATTCCCCCTAATAAACTGTTGCTATACATT 1533140 30 100.0 37 .............................. TGAGTTGCTGATAGTATCCAGTGCCTGTGGGAGGGCT 1533207 30 100.0 35 .............................. CATTTACAACCCGCACAGGAACGCCACTGTTCCGG 1533272 30 100.0 38 .............................. TGGTTCGGCGACTGAGATGAAAAGAAAACTCAGATCCG 1533340 30 100.0 36 .............................. ATAATCCTTCCGACAAGCGGCCCGACACAGATAACC 1533406 30 100.0 35 .............................. TTTTTGAACAAACAAAGAAAATATACTGTGAGATT 1533471 30 100.0 36 .............................. CGATCTAACAGGGCAAGACTGGGCAATCTGGCTATT 1533537 30 100.0 36 .............................. AAAATAGATAGCCAACTAAACTTGCCAGAAACAAGC 1533603 30 100.0 36 .............................. ACTCCAGAAACCTAGAAAAACCTAGAAGATTCTGGA 1533669 30 100.0 37 .............................. CAATTAGGTTGTTTCCAGTACAATGATCTATGGTTAG 1533736 30 100.0 37 .............................. ATGTGAAACAACTTTCTTTTTCAAAAGAAACAAAAGA 1533803 30 100.0 37 .............................. CAGGGAGAAAAGATTTTGGGCGAAAACTGGACATCAA 1533870 30 100.0 36 .............................. TTGAGATAATGTCCTTCAGATAATCTGTATATATAC 1533936 30 100.0 36 .............................. TTGTCGGTGTGGCAGGAATCATTCTAACTGTAAGGT 1534002 30 100.0 36 .............................. CCGTGTTACCTGCATCGGTGGGGTTCTGGGATGAAG 1534068 30 100.0 36 .............................. AATGGTGAAATTCCGCCTGAAATATTCACAGAGAGA 1534134 30 100.0 37 .............................. AGGGATATTTTATCTTGAGTGCGTGGAGACGGAAATA 1534201 30 100.0 36 .............................. TTGAATATGAATATGAGTATGCGTAGGTGTAGTAGT 1534267 30 100.0 36 .............................. CTCATTCACCTTCACAGTCATTTTTCATTCACCCAT 1534333 30 100.0 37 .............................. TGAGGTCCATGTGCTGACCTATTCTCTCGTCGTGCTG 1534400 30 100.0 35 .............................. TAATGATTTTTCCTCTAATCCTCTTCCGGTGGGAG 1534465 30 100.0 37 .............................. AACAGTATTCGCCTAAGTCATATAAATTAATTTCTTC 1534532 30 100.0 37 .............................. GAGTGTTACTCTATATTCTCTTTGAATATTAGATAAC 1534599 30 100.0 37 .............................. ACATATAATGGAACTACTGAAAATGGTTCAAGTGGAA 1534666 30 100.0 27 .............................. TACAAAAACAACAAATATATACCACTG Deletion [1534723] 1534723 30 100.0 37 .............................. TAGTCAAATTCTTTTTTAAGTATATTTCTTAATTTTA 1534790 30 100.0 37 .............................. CCAATGATGGCAGAGATTTCCTCAAAGAAATAGCGAC 1534857 30 100.0 37 .............................. GCATTTCAGTTGAAATATAATTTAAACCAATACCATC 1534924 30 100.0 37 .............................. AGATGTAGTTTGACATTCAACGGATTTTTTACAACTT 1534991 30 100.0 36 .............................. TTTTGATTGACTGATTATAACCACCGGAAAGGACTA 1535057 30 100.0 37 .............................. TATCTTTAGACTCGTTATGTTATCGAGGTGTTAAAAC 1535124 30 100.0 37 .............................. TTCATTTAATAAACCTCCCAATCAGTTAATAGTTTAA 1535191 30 100.0 38 .............................. GTGGTAAAGTTCAAGCTTTAAAAAGACTTAATAAAAAG 1535259 30 100.0 37 .............................. TTTTGAGTAAATTACAATTCATAATTTCAGCCATTGC 1535326 30 100.0 36 .............................. AGATTTCTTTTTCTGGACAGAATGTCATGTACTGTA 1535392 30 100.0 36 .............................. TTGTTTCAGTGGTTTTTTATGTTTTACAACACATTT 1535458 30 93.3 0 ..............C..............A | ========== ====== ====== ====== ============================== ====================================== ================== 93 30 99.9 36 ATTGTTAGAATACCTATAAGGACTTGAAAC # Left flank : GGGCATTACACTATGGATTTGTTACATTAAATTTAGGTAAGGAAACGGATTATATGATGCGGTTAATATTGGCCTGATCCTTTCAAGATCAATGCGTACTGATAATCCTGTGAGAGGATCACCAAATCCATCGATCTCCCCGTATAATTTATATAATCCTATGTGGTAAAGTTTCATGCATATTGATCATAAAGTCATGAAAAAGGTTTTCGGTAGGAGTTTTTGGAAAACATAAGAAAAATATGCAGATTGCCATCTTAATTAATATTACTCTGGACTTCGTCGACCTATGATCTTGTTTATTTCATGTTAGATCGACGAATCCATCTATCACTCCAAAAGATTTAGTTTTTTTAAAGATTTATAAATAATGCTATTGTATGTTATTAATCACTTTAGGAGATTTACCTACAATTTCGTAAATTTCTTCAATTTTCCATAGTCCAATAAGATCCATACTTTAGAAAGAGTTTAATAACTTAGAGTAATAAAAGTTAAGG # Right flank : ATTTAAAATTATATAGAATCTAAGCTGACTGTTATAGAGAATGTTTTTCAGTGTTGTTTTCAATGTTAGCAATAAAAGTATGGTATTTCATCTATAGTATATTACTTGTTGTATTTTTCTCAATACCGATGAGTTCCCTTTTAGTATATTTTGTATTGCTTAAGGTATATATTATAATAGAATCTTCCTCAGAATTAATCGCCCTTTTTAGCTCTGCTTTTAGCTTTGATAAATTCCCAAGTGAGATTTCACCTTCAAAAACAGAGTTTTGAATCCATGTTAGGTACTTTCTTGATATTTTTAATGCTTTTACTACTCTATTTTCCCTTATATCATAGAACATTATTACAAACAATTTTGATCACCAAGAAGTATGGAACGGCTTGTAATCACTTTCCCCAAGGAGGTATTTCTCAATCTTGTAGCATTCCATTCTTATTAATCTCCTGTAAGATACCTCATGAGACAAACTCTTCAATTTAATAGTAGTGGATAGCTTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTTAGAATACCTATAAGGACTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //