Array 1 98239-98538 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJKL01000003.1 Campylobacter sp. P0111 ERR460672.12216_2_83.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 98239 36 100.0 30 .................................... AAAAGCCATTGCTATCTTTGCTACGCTTTG 98305 36 100.0 30 .................................... CCCAAAAATAGTCTTAAATAAGTTCTGATA 98371 36 100.0 30 .................................... CTATTATAGGCAACTCTTGCTAATCATTTA 98437 36 97.2 30 ........................A........... TTTCATTTGTGCTGATACAGCCTACAGTAA 98503 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 99.4 30 ATTATAACATATAGAAACTAAGGGGGTTCTTATAGT # Left flank : GAGATTTTAATGCGTATTATGGTTATGTTTGATTTGCCAGTAGGGAGCAAAAAAGAGCGAAAAGAGGCTGCTAAATTTAGAAGTTCTCTTTTAAAATGTGGATTTTTTATGTTGCAATTTTCTGTATATGCTAGAATAGTGCGTGGATATGATAAGGCTGAGGTCATTACTAACAAGATAAAGTCTAAATTACCTAGCAAAGGAAATGTGCGAATGATTACAATCACCGAAAAGCAGTATTCAAATATGGTAGTATTAAAAGGCGAACCAAAAAATTCTACAGAGAAACTAAGCTTAGAAAAAAGCTTATTTGAATTTTGAATATTTTGCCAGGATTAAACCTGGCAAATGGTTACGATCTAAAAAGATCTTATTATAAGAATGCCCTTAGTTTTTATATGTTATAAGATCTGAATTATACAGTTTATTGATTTAAAATTTAATTAAGATATTAAAATTTAGATCAAAATACCATAAAATCATATCTATAAGAAGTTTCT # Right flank : TTTAAATTCAAAATTGGAACACAACTTGCTTAAGGACTAGCAAATTAACGCAGGAGCGATTATGCAAAATGGATATTATCAAGCAACTGGCGCAATGGTGACTCAGTTTAACCGCTTAGATATCATTACTAATAACTTAGCTAATGTAAATACTAGCGGATATAAAAAAGATGATGTGGTGATAGCTGATTTTGAAAGAATATTTAAAGAGACAAAGGATGCTTTGCCGCTAGAAAATCACACTAAAGATTCAGCTAAATTTCTAAACCGCACATTAAATAGAGTGCCACATATCAATGAGGTTTATACTGATTTTGGCACTGGTGGGCTAAAGCATACTAATAATCCGCTAGATATATCACTTGGCAAAAATGATCTATTTTTATTAGTAGATAGTCCATCAGGTATAAGGCTGACTAAAAATGGCTCACTAAATTTAGATAGCGAAGGGTATTTAGTTACAAAAGAGGGTTATAGAGTACTGCCTAGCAACTATGCTG # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATAACATATAGAAACTAAGGGGGTTCTTATAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 916-161 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJKL01000014.1 Campylobacter sp. P0111 ERR460672.12216_2_83.14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 915 37 100.0 35 ..................................... AATAAAGAAGTATTAATCACTTGAGCGTCATTAAG 843 37 100.0 34 ..................................... TAAGTTATAAGGAATATCCGCAATCACTAGCTGG 772 37 100.0 35 ..................................... GTCTTGTGCTACAGCTATTAGATCTGGGATACCGC 700 37 100.0 35 ..................................... AAAAATCCTAGGTATATTAGCTCCATTGGTTACAA 628 37 100.0 34 ..................................... AAAAAAAGGCAGATGAAGAAGCCGAAGAAAAAAA 557 37 100.0 36 ..................................... ACGCTATCAACATAAGCTTTATTTGCTACTTGATTG 484 37 100.0 34 ..................................... AGTTGATGGACTGGTGGAGCGTTTTCCTGTGATA 413 37 100.0 35 ..................................... AGAGATAGGAATATATCTATCTTTAAGGTTTGTAA 341 37 100.0 35 ..................................... GCCCCAATAGCTTTAGTTACAAAATCCATCTCTAG 269 37 100.0 35 ..................................... CTAAACTTTGATTATAGAGATATTGAAAATATTAT 197 37 89.2 0 ...........................A.C..A...T | ========== ====== ====== ====== ===================================== ==================================== ================== 11 37 99.0 35 GTTGCAAATTATACCACAAATCAACTCGGTTTGAAAC # Left flank : AAATCAAAATAAGCCAATACTAAATAAAGGCACTAAAATGCAGCTTATAGCCTACTCCAAGCTAGCTAGTAAGCATTTTAATAAACCATTTTTTAAGATAATGCTAATTTGTAGTAATAATCTTAAATTTAAGATATTTGATATAAACAGTGATGATTTAGCCCAATTTAATAGCACGATAGATAAGATTAATAAAATGTTAAATCAAGAGCTATTTCCGCAAAGTTGCGCTAGTATAGCTGCTTGTATGCAGTGTGAATTTAAAAACTACTGTGATGATAGAGAATGATACCGGGGGTGCCATATGGCAGTTGCCCCGATCTGTTAACACCTTTAGGTGATTTCAAACGCTAAAGAGTTAATCTGTAGTATAATTTGCGTTTGTATTATAGCTAAATTTTTCCACAAATTCGCTATTTTTAGCATTTTTTTTCAAAGTGGAAGAATTAAGACCTTTAAACTATAGCCAAACGCCCATAAAATAGGCTAAATTTAGCTCA # Right flank : TAGGTGTCTAGTTTATAAATTAGACACCATCGAATTTATCATAAATAAATTTAGCTTAGAATTAAAATTAAATTAATGCTTTGCTAAATAGTTTGTATCATATAAATTATTGATAAAATCATCATTATTCATCATATTTATATGGAAATCTTTTGTAGTTT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAAATTATACCACAAATCAACTCGGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //