Array 1 380570-383430 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR130785.1 Senegalia massiliensis strain SIT17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 380570 30 100.0 36 .............................. GACATGAAACAATTAGGAATCCACAAAAGTCAGTAT 380636 30 100.0 36 .............................. AGCTATATTCAATATTGTTCCCCTTATAGTTTTGTA 380702 30 100.0 36 .............................. AGTGATACGGTATGTAGAATGGTTGAAGCTTATAAT 380768 30 100.0 36 .............................. ATTAAATCATTTTGAAGCTCTTTAACTTTTTGTCCT 380834 30 100.0 36 .............................. TAATCTCCAGTTTCAACTAATCCAGCTTTTCTGACG 380900 30 100.0 36 .............................. AATTATCCTTGGATATTAAACTTAAAGAAGGCTAAA 380966 30 100.0 36 .............................. TAAATTGTGATGCTATAGCAAGTAGAAGTGGTTTCT 381032 30 100.0 35 .............................. TAATTACCTCTCTTTTTATATAGTCGGTATTCTAA 381097 30 100.0 36 .............................. TTAGTTATTTCAAGTTGATTTGCTATTTCATTAGTT 381163 30 100.0 36 .............................. AAGTCGATACAAGAGAAAACTATATGAAGAATATTT 381229 30 100.0 36 .............................. TATTAACTTCATCTCCTTTTACTTTAGTTCTTTGTT 381295 30 100.0 36 .............................. CTAGAAAGTTCAGCAGTTAATGAGTCTACTTTAACT 381361 30 100.0 34 .............................. AAGACGAACGTATAGGGACTAGTACTATTTACAG 381425 30 100.0 36 .............................. CATCAAATGGAACCAGAAATAGCGGCTATAATGTAT 381491 30 100.0 36 .............................. AAATGAAAATAATACAAGTATAAGAGCTTCTGAAGA 381557 30 100.0 36 .............................. TTATCCCTTTATCCAAATCAAGTTCAAATTTTCTAT 381623 30 100.0 36 .............................. GAACATATGTTCGGAAGTCAATATAAAAATAAGGCT 381689 30 100.0 36 .............................. TCAAAACAATATGCAGTGTACTCATCTTCTATATTT 381755 30 100.0 36 .............................. ATTTCTATTTCAGGATTAAACCTAATAGCATTCTCA 381821 30 100.0 36 .............................. GTGTTAAATTGATTATAAAACCATTCTCTATATGTA 381887 30 100.0 36 .............................. TAAGATTAGAAATATGTATTCGGGCGAAATTAAACC 381953 30 100.0 36 .............................. TAAGGATCTCGTTTAAATAAATCTAAAATAAGTCGA 382019 30 100.0 35 .............................. AAGGAAGAAGATATAGAAGATGAAGAAGTTGAGTT 382084 30 100.0 36 .............................. GTATTAAAAAGTGTTGAAGGATTTAGTTTAATAGAA 382150 30 100.0 36 .............................. AATGAATGGGATGATAAAAGAGAAAGTTTCTTTAAA 382216 30 100.0 36 .............................. ATACTATCATTTAGTACTGCGTTACCCGACAATATA 382282 30 100.0 35 .............................. TTTGATTCACTCCTTTACTTATAAAATTCTTCTTG 382347 30 100.0 36 .............................. AGCTAATCCAGGACTAGGAACTATTAAGCGACTAGA 382413 30 100.0 36 .............................. ATTTCGGTTTTTGTAAATTCAGCTTTTCCATTTAAC 382479 30 100.0 36 .............................. GGATTACCAATAGTTAAATTATATTCTGGACTAACA 382545 30 100.0 36 .............................. GAATTTCAAGCTTTCTAGCCATTTCAGATTGACTAT 382611 30 100.0 35 .............................. ATTTTATCTATAGGGTATAACCAGCCATCATCTAA 382676 30 100.0 35 .............................. AGATTGGTCTGGTAAATACTGTCCACGTGTCATAT 382741 30 100.0 36 .............................. ACTGTATTAGAGTGTGTATATCCTTTACCATGGTGC 382807 30 100.0 36 .............................. GGTTTCTCTGCTAATATTACTGTTTTCATTAATTAA 382873 30 100.0 35 .............................. AGCAATGGACAAGCTTAGAAAAGAAATATAGCTAC 382938 30 96.7 36 ....G......................... GAAATAATGTCTAACTGTTCTGGTGGGAATCCTATT 383004 30 100.0 36 .............................. TTTAGGCCCGCCTAGAGATTCTAACAAATGGGTATT 383070 30 100.0 36 .............................. CAGAAACTATTAACGAGGTACCGGTAGAGTCTAGGT 383136 30 100.0 36 .............................. TAAAATCCCCTTCTAGTAATTGTGATATAATCTCTA 383202 30 100.0 37 .............................. TTGCAGCACCACATCTGCTACATCTAACTAAACCTAC 383269 30 100.0 36 .............................. TTAAGTCAGACTCTTCAGGAGTAGTTCCATAATACG 383335 30 100.0 36 .............................. AAGAAAGATACATCTTGTTTCATCTTCTTTTCTTCC 383401 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 44 30 99.9 36 GTGGAACCTTAACAGAAGTTGTATTTAAAT # Left flank : AAAAGAAAAACAGAAAAAAGAATTTATATTTATGTGAATGTGGAAATAGAATCCATTCTGATCTTAATGCAGCTAGGAATATAGCATCTGCTTAGATGATAATAGTCTAAGTGCCTAATTCAATATAATTGTATCTTAGGAAGGGCAATTGGCATGTCCTAAAGCTAGGGTCATACTATTGTAGTGGAAACATATACAATTTTAATCACCTAGCAACCTTTAAATTACACTGTTGTAAGCTTGAAAAAGTAGGATGTCAACTATGAGGAATTGAAAAATTATAGAGTGGAATACAAAATAATAAAATCATTTATAAAATTGTATTTTACCAAGTTATACTTTTATGAGTTTCTTTGTAATTAAGTAATATCAAGTTATAGACTTAAAAATAAGCTATATTTTGAATTAATATATTAGCTTGGTAAATAAACAGTATAATGTTTGAAAATAAGCTATTAATTAGATATAATATAAAATATATATATGGCTATTTTACAGTA # Right flank : TGGGAAGGATTAAATATTAAGCATTTTGTTGTAATTAAGGTTTTCTTTTCTAACCTTTGATTGATATATATATAATTAATATATTATACTTGACATTTAGAAGAAAATTATATATTATTTAATCAATAAATCATATCAATTATATAATTAAGTATATTACATTTAGAAGGGGAGAGAATTAATTGCAGAAAAGAAAAAAATACTTTAAAAGAGTAATGAATATTAATGAAGTTTTATTTGGATGTTCTGTTTTATCAGTGGTTTTATACTTTTATTTTTATCCGATTTTTAATTCTGAAAAGTATAATTTTATTATTAATATTGTTTTATTTGTAAATGGAATACTCTTAGTGATATTTAACACAAATTTTATTAATTTTAAAAATAACTTTAGAAAGATATCAATTTTTATAGTTATGATAATAGAAAGCTATACCATATATAAGATATTTTATTATTGTAATATTGGTATCATTATATATTTTAAAATATTACTTACA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGAACCTTAACAGAAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 2 393164-396372 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR130785.1 Senegalia massiliensis strain SIT17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 393164 30 100.0 34 .............................. ATATCAGCGTTTCTGTTAAATGCAATTGCAGGTT 393228 30 100.0 36 .............................. ATGCTCTTATATCGTTGTTTAATGTTCCATCAAATG 393294 30 100.0 36 .............................. GGAGTATTCCACTTTTGTTCTCCTGAATAAATACTA 393360 30 100.0 35 .............................. ACTTTACAGGTTTGCCGGACGGGAAAGCCGAGAAT 393425 30 100.0 36 .............................. CTCCATTCCCTGCTACAGTTTGCTCTATAACGCCAG 393491 30 100.0 35 .............................. CTTTGAAACGCTCTATTCATATTACCTCCTTAATC 393556 30 100.0 36 .............................. ATGCAACAGAGGAAGATTTGGACAAGCATAATCAGA 393622 30 100.0 39 .............................. ATTGCAGGCGATAGCATAGGTTGTGCTTTAGTTCCTGGG 393691 30 100.0 38 .............................. CTTATAAAGACAGAGGTATAAGAAGTAAAGTATTTAGT 393759 30 100.0 39 .............................. ATTGCACCTAATGCACTTATAATTGTGCCGACTACTACT 393828 30 100.0 37 .............................. TTAGATTCAAAACGTTTGCTACAATCAATGTTAATAC 393895 30 100.0 37 .............................. TATACACTATCTTGTAATGTATTAGCTACCTTTCTTA 393962 30 100.0 36 .............................. TTTCTTCCTATCCCCTTTCTCATTTACGCATACTGG 394028 30 100.0 37 .............................. CAATAACTAGAGGAAATAAAACAGAGACAATGTATAT 394095 30 100.0 37 .............................. ATAAAAAGTGGGATAGTTAAAATATTAAAAGCTATAG 394162 30 100.0 36 .............................. TTATAGTGGTAGAGAAGAAAACAAGCAAAAAACTGA 394228 30 100.0 36 .............................. GACACAAATGGACTAGCTATAAGCTTTAAGAACATA 394294 30 100.0 36 .............................. AGTTTTCCCTGATTTTCAAAGTCTAAAATTGTAACA 394360 30 100.0 36 .............................. TTTATTATATATATGAATAATCCCTATTCCTATAAT 394426 30 100.0 36 .............................. GGAACAGCAAGATATTTTAATATATTTTTATTAAGT 394492 30 100.0 36 .............................. AACTCACCGTTTGCAACCATTTCATCAAGTCTATTT 394558 30 100.0 36 .............................. AATTTAAAAGTGTATAACAATATAAACATATAATTT 394624 30 100.0 36 .............................. AATAAAACAATCAGAAGGTGTAGTAATTGATTTTGC 394690 30 100.0 36 .............................. AGTAAACCACGTAATCCACCTTTTAGTTTATCGAAT 394756 30 100.0 36 .............................. TTTCTACAGCCTTTATTAGTTCTTCTTCCAGCTTTT 394822 30 100.0 36 .............................. AAAAGAATATATTTCTTTTGAACAACAATTAGTTGG 394888 30 100.0 36 .............................. AAAAGAACCTAGGGCCTTAATAGCCCCAGGTTTTAA 394954 30 96.7 36 ....................A......... TTTCTACTATTCCTCCTCATATTGCGTACATACTAT 395020 30 100.0 36 .............................. AGGAGGACTAGACTTCGATTTAAACTTAATAGAACT 395086 30 100.0 35 .............................. ACCCTTGTTAAACACTTTTTATTGTTTGGTAATAC 395151 30 100.0 36 .............................. AGAGTGCATCTTCCATAGATTTTAATCTTTCTTCAT 395217 30 100.0 36 .............................. TTACTTGAATTACTTGTAGAACTGTTTGAAATATTA 395283 30 100.0 38 .............................. ATTTGTTTCAGTTTTCATGATGTACCCAAATTCATTGC 395351 30 100.0 36 .............................. AGTAGAAAATGCACTCCATAAATCTGCAATAGGTTA 395417 30 100.0 37 .............................. TAAATATAACGTAGAACAAAAAGACTTAAAAATAGAA 395484 30 100.0 36 .............................. ATATTACATCTGCCTCTATTCTAGCTAATCCACTAG 395550 30 100.0 36 .............................. TCAAAAGAGTAAAGAGATGGATTTGCTTTATCCCAC 395616 30 100.0 36 .............................. TCATTATATTTAACATATTATCATAATTTTTGTAAT 395682 30 100.0 38 .............................. CTATTAGTAATGGACTTAAGAAAGTATAAAGGTGATAT 395750 30 100.0 36 .............................. TATTATCCCTGAAATAGAAATAACATATAGCACAGA 395816 30 100.0 35 .............................. GTTTTATTTGTAGTACTGTTTACACTTCTAACATA 395881 30 100.0 37 .............................. GTAGTTACTCTTTCCTTAAGTGATTCTACTCTTTTCA 395948 30 100.0 35 .............................. TTTAATCACCTGCCTATACTCTATACCCTCTATTT 396013 30 100.0 36 .............................. TCTAATTCACCTACCTTTATGTTAAAGAGGGGAACT 396079 30 100.0 36 .............................. TGTATGGCAAGGCCGTGGGGGCAAATTCAATACAAT 396145 30 96.7 36 ......C....................... TATTGTAAGTCTTGTAAATCCCAACCTTCAGTTCTT 396211 30 96.7 35 ......C....................... TTATTTAAAACAGGCCACAGTATAGAAGATATTAG 396276 30 96.7 37 ......C....................... AAATAAAGGCAATTATTATTTATATTTATGTTTAGCG 396343 30 90.0 0 ........G.....G.....A......... | ========== ====== ====== ====== ============================== ======================================= ================== 49 30 99.5 36 GTGGAATCTTAACAAAAGTTGTATTTAAAT # Left flank : GAGTTTGTACCCTTCAATCTAAAGGAGAGTTGTTAAATGGGTAAAATAAAGAACTATAATTACGCTTTTGTACTATATGATGTAAATGAAAAAAGAGTACATAAGGTATTCAAGGTATGTAAAAAATATCTCAATCATTATCAAAAGTCTATTTTTAGAGGAGATATTACTACATCTAAATTAATTGCTTTAAAAAATGAATTATATCAAATTATAGATCCATCAGAAGATTTTATTTCTATAATTAAATTAGTAAATAAATCAAGTTTTGGAGAGGAAATATTGGGAACACCTCAGAAAGATGTAGACAGTATGTTTATATAAATTTACCAAGTGATAAGTTTATTTTATATGTTATAAAGACTCTATTTTACTAGTTGATAGGGAAAATTATAGAAATATTAATAACTATATTTTTAAGTTGGGAAAATTGTTGAAGAATAGTAATATGTACACACTAGAGCCGAATTTAAAGAAAATAAAATATGTATTTTACAGTA # Right flank : TACAAAAATTTATTAATATATCTTGAACTTAAAAAATATACATGTGTTGATGAGATTGTAAAAAAGGCACATATATATAATATAAAATCAAAAGTATGATTTCACATAACACACCACATAATTAATCCAAACTTTCTTGGGTATACTATTCTTAAGGAGGTTTATAAATGATGAAAAAACGTATATTATTACCTTTATTTTTAGTCCTTATATTGACACTTACAGCATGTGGTGATGGTGATTTAAATGGTGATGATGTAGATAATAATGATGAAGTAAGATATGAAGATATTGAACTTACTCCAGAGGATGCATATGATAAATTTATGGAAGCTCATTCAGATTCAAAAATCAGGGGAATTTCTCTAGATAAAAACATGACTGAGTATCAATATGTGGTAGAAGGTTATGATGATGAAAATGATTATGAGGTTAAAATCAATCCTGTAAGTGGAGACATCATAAGTGATGATACAGAAATTATTGATTTAGATGATGAA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGAATCTTAACAAAAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //