Array 1 3285-4504 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSVG01000023.1 Coprobacillus cateniformis strain OM02-5 OM02-5.Scaf23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 3285 30 100.0 35 .............................. ATAGGTGAAATGAGTATGACAGAATTTAAAAACGA 3350 30 100.0 36 .............................. TAATAAATTGAAACTGGAGACCACTTATCACCAGAT 3416 30 100.0 37 .............................. ACCATTCAGCCAGTTTTGCAATTGCTGCAGATTTTTC 3483 30 100.0 36 .............................. TTATAGCCGAATTTTCCACTGTCGCTTTTATTACAG 3549 30 100.0 36 .............................. CACAACATCAAAAGAACACTTAATTGAAATTGAAGA 3615 30 100.0 36 .............................. AACAATACTTTAAAACTTGTAAGAGTACAGAATAAA 3681 30 100.0 37 .............................. TCGGATTCAATTCATATTCATTTTCAAAAATATAAAA 3748 30 100.0 36 .............................. AAATACTACTGTTGCTAATGTTGTACGTAATTTATT 3814 30 100.0 36 .............................. TTATAAATTTTAGGACATATATTTGTATAAGTTTTT 3880 30 100.0 36 .............................. TGCATAATCAACGCCACTCAAGAAAGGAAACAAGAA 3946 30 100.0 36 .............................. TCATGTGTTAATAGATATTGGCCTATTTTCTTAGCG 4012 30 100.0 35 .............................. ACATAATTGACCAACTAGGTGGAGAGTTTGAGGAT 4077 30 100.0 38 .............................. ACACATGGGCTAAGAACATTAGTTTCCCAACACGTAAA 4145 30 100.0 36 .............................. TTATCCATTAAATAATCTATGCTCACTTGGAAATAA 4211 30 100.0 35 .............................. TACATCAAGATGTAATCCCTTTATACGACTATTTC 4276 30 100.0 36 .............................. TTTGATGTGTAAACAGTCTTCGCTCTTTGATTAACT 4342 30 93.3 37 ........C.........G........... TAAGTTGGGGGGAGTACTGACTATGCAACAGGGAGGT 4409 30 96.7 36 ........C..................... TAATAATCAACAGTCTGTTTTTGTTTATAAAGATAG 4475 30 93.3 0 ........C....................G | ========== ====== ====== ====== ============================== ====================================== ================== 19 30 99.1 36 GTTTAATATCAACATATGATGTTTTGAAAT # Left flank : ATCTCACCAATTTCAGATACAACAATTATGGCATCAGCAGGTGCACAATGTCATCATGTTGGTCATGTTTCTACACAACTTCCTTATGCGATGGTTGTTGCAGTTGCATGTATTGTTGGTTATATTGTTGCTGGTCTGACACAGAATGTTTGGCTAACATTTTTAAGTGGCTTGATAACTTTATTAATCATGATATTTTGTATTAACAAGAAAGGCTAACCCTGTTGTGAAAAGATAAAAAGTTAAAATATGGTGTAAAATTAAAGATGATAATCTTATTAGAAACAGTATTGTTAATATATTTTATATGTTTGAATTGATTATAATTTACCAGCAACAATTATTGATATAATCAAAAAAACATTGAATATATCACATAAAAATAGAATTTTATGTTGATTTATGATATAATTATTTTTATTTGGTAAAAATATGAAAAAATATTGATAAATTCAATAGAATTTTATTTCTGCCAGTTATGAAAGTGTTGTTTTATCTGG # Right flank : GTTATTTATAATAAAAATATCCCTATATTAAGATGCTATAGGGATATTTTTTTATCTTCAATTTCTATTTTAATTTTTTCATAAAGTTCATATGTAGCAATACAATCAGCAATTGATCTATGTTCATTATTGGAAAGGTTTAAGTATTGGACCATATCTGTTAAACGATGATGTTTCATGTGAGGATAGACCTTTCTACAAAACTGAAGTGTATCCATATATTCATTTTCAATATCTATATGAAATTGATTTGCAACAAAGTTTAAGTCAAATGATGTATTGTGTCCTAATAAAATATCATCACCAATAAAACTGAAAACATCGTCTCTAATCTCATCAAGGGTTGGCATTCCTAATAACATATCATTTGTAATTCCCGTGAGTTTGGTTATAAAAGGGCTAACTTCACGTTCTGGATTAATGAGTTGAGAATATTTATCTATAATTTGTTGATTTCTTATTTTTAAAATTCCAACTTCAATAATCTTATCATCGGCCCA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATATCAACATATGATGTTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 1462-2815 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSVG01000031.1 Coprobacillus cateniformis strain OM02-5 OM02-5.Scaf31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 1462 33 100.0 35 ................................. TTAGACATGATGTGATAAATAAGAGAACTATTAAC 1530 33 100.0 36 ................................. ATATTAGAGTTATTGCTGATTACGATATGTTATTTA 1599 33 100.0 37 ................................. TTGGGACTAATGCTTCGCTTGAACGTGCTTCCTCGAT 1669 33 100.0 37 ................................. TTGGAACAATAATAATACTTATCGAAAATACGCTCCA 1739 33 100.0 35 ................................. ATGAATATGATTTTGAAATTGGATATCATGGAGCT 1807 33 100.0 36 ................................. GAAGGAAATGGACAGTTGTTTAGAATAAAGACAATA 1876 33 100.0 35 ................................. AAGTTATACACAATTTGATTCGTTAATTTGTTGTA 1944 33 100.0 36 ................................. TTGTTTACGGGTCTTGGTACTCTTGCTATGGGTGCG 2013 33 100.0 36 ................................. CATCTTTTAAAGATAATGCAAGTGAAGTCTTAACCA 2082 33 100.0 38 ................................. ACTGGAGATAGTGAGTTAGGAAATAAGATTGTAAAATC 2153 33 100.0 37 ................................. TTTGATTTAGATGAAGATAGAAAGTCTATATTGAATG 2223 33 100.0 38 ................................. CCCTTCTAAAGTGCTTCCTAGAATAACAAGCGATCCCT 2294 33 100.0 36 ................................. AATAATGTCGCTGCGGCACTTGCTTGCTGGTCCTTG 2363 33 100.0 36 ................................. TTATCATAAAATGATGTGCTCCCTACATTTGCTTTG 2432 33 100.0 37 ................................. ATGATAAAGATAAGTTTTCTAATTTTAAGTGTTCTCT 2502 33 100.0 36 ................................. CTTAGAGAACAGTTTAATTGTGTTGTGTCTTGCTCT 2571 33 100.0 37 ................................. TTGCATCGCAAAGCCACGCATATATCTATAGGAGGTG 2641 33 100.0 38 ................................. TTGAATGTTCCTCTTGCTTTTACAGGTATTGTTAATTA 2712 33 97.0 38 .........A....................... CCATATGAATTGATTCTAATCTTTAAATTAGCGGTCTC 2783 33 97.0 0 .........A....................... | ========== ====== ====== ====== ================================= ====================================== ================== 20 33 99.7 37 GTATATAATCTAACCAATAGTTGGAATGTAAAT # Left flank : GTAAAAGATTTGACACATTGTTATAAGTGTGAAGAAAATTGCAAGAAAGGATTATTGAGAAAAATTAAACCATACACATTTACTCTATTTGCTAAAAAATATGGAGAAGAAAAGCTTTTGGATTGTTTAGAGAGAAATGAGAAAAATGGAGTTGTGTATCATCGAGATGGCATAAACGGAGATTATGATGATTTTGATGATGTAGAGCAGTTAATGAATTTTATCTTGACAGGAGTGCGATAAATCCCAGTTTGACAACTTCATATCCATACACACAAAGCAGTTAGTCTTAGGATTGACTGCTTTTTAAAAAGACACCATTTCAGTAATGATGTCTTTTGAGTGTTATTTTATAGTCATATCAAGGCTCATTCAACCGTGGTAAATTCGTGGTAAAATGAATGCTTTTTTATACTTCAAAATGCTTGAAAGTACAGTAGTTATACGGATAATCGAAAATTAGATATAAAATTTATATAAAAATAGTGTAGTATTTATGG # Right flank : TTTAAATGCTGTTTTGAAATACTGACTATACAAGTGATGAATTAAAGATTATAGTTTAATACCAACATATGATGTTTCGAAACTTAATGATTTATTTAATTATATTTTGTGAAGAAATAACAAAAAGAGAAGGACTTTACTTCAAAGTTAATTTTCTCCACCTTTATTCTAATAACATAGTTTAATTAATCTTTAATAGCCCATCTCATTTTGGTTGATTTGGCACGACTATTCATATGACATTCTTCTTTACTAGGTCTTATAACATTCCTTGCAGCATCACTATAAATACCAAGATTCTTCATTTCTTTAAAGGCCTTTTTAACAATTCTATCTTCTCCAGAATGAAAAGTAAGTATCGCAACTCTTCCGCCTGATTTAAGAATATTGGGGAGTTTTTCCATAAATTCAATAAGAACATCAAATTCATTATTGACCTCAATACGTAATGCTTGAAAAACTCTTGCAGCAGACTTTTTAATAGACTCTTTTCTTTCGTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATATAATCTAACCAATAGTTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.20,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [81.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //