Array 1 200385-201536 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QTXT01000001.1 Ruminococcus sp. AM47-2BH AM47-2BH.Scaf1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
    200385	    32	 100.0	    34	................................	ATTTCTCGTATAGATATAAAAAACACGACCGACT 	
    200451	    32	 100.0	    34	................................	TTACATTTGTTAGGACTGCTACGGCGATTGCTTG 	
    200517	    32	 100.0	    35	................................	TGTGATAATCACCGCCCCATGTCTGAGGAACACCC	
    200584	    32	 100.0	    34	................................	GTACACGCAACACCCCTGTTAGTAAGGGGTGTTA 	
    200650	    32	 100.0	    35	................................	TTTATTTCTTATTATACATGACTTGCGCACCATAG	
    200717	    32	 100.0	    33	................................	TTCTACAAGGCTGTTCGGCAGGTAATAGTAGCT  	
    200782	    32	 100.0	    33	................................	GATACTATAGGCATAGCAAGATTTCAAGTTTTC  	
    200847	    32	 100.0	    32	................................	AATCTCATTTATGGGAAAGTGGTTGAAACAAC   	
    200911	    32	 100.0	    34	................................	ATCATTAAGGTCTACAAGCAGAATAAGAAAAAAG 	
    200977	    32	 100.0	    33	................................	AAATCATGCAGATCAGAGCGACTTGTACACACA  	
    201042	    32	 100.0	    34	................................	TCTTTACATCTTTGTATGCCTGTTCAAATTCCTT 	
    201108	    32	 100.0	    35	................................	ATATTGTCTGTAGCTGTTGCACCTGCAGTACCCAC	
    201175	    32	 100.0	    33	................................	TGCCATTTTTCAACGCACTGGATATTGTTACTA  	
    201240	    32	 100.0	    34	................................	CTGTCTGCTATCACTGGCAGGGGAAATAACAAGT 	
    201306	    32	 100.0	    34	................................	TTGGGCTACGTTGGTGAAACAAACGCCCGTCCTG 	
    201372	    32	 100.0	    34	................................	TTACCTCTACTTCTGATTCTGTTGATGATCTTAA 	
    201438	    32	 100.0	    35	................................	CTGAGCTACTACGTGGCGCAGACCATAGAGAAGCA	
    201505	    31	  81.2	     0	..............T..AA.A..-....T...	|                                  	A [201532]
==========	======	======	======	================================	===================================	==================
        18	    32	  99.0	    34	GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT	                                   	       

# Left flank :   TGGCGAGCTAGATGAGTACCCGAACTATTTGCTGAAATAGAGGTGATATAAATGATGACCTTAGTAAGCTATGATGTATCAACAACAGATAATAAGGGTAAAACAAGGCTTAGAAAAGTAGCCAAAGAGTGTCAAAATTATGGTCAGCGAGTGCAGAACAGCGTGTTTGAAATAGACGTAGACTATGGCACTTTTCTGAAAGTGAAAGATAAACTTTTGAAAATAATAGACCCAATGCATGATAGTCTGCGGATATATTACTTAGGCAACAATTGGAAGCATAGAATAGAACACTACGGCACCAAAGAAACCTATGACCCCGAGGCGTCCTAATATTTTGACCAGCGTACCCCAAGTGATCCACAAATCCCTAGTAAGTTCGCATGAAAATGCCATGCTATATGTGAATGAACAGTGAATAAAATCAAACCGATACCCATTAAATAAAAAAATAAGTCCGCATCACGTTGAGCAAGCACCAGATATACACAACATCAAGG
# Right flank :  TCTGTATGTCACGGATATTAAGATGTGTTGTATATATTGTCTTTTCTTAAGTGTTGAATTTTTTACTATTGCATTGTGATATATCGTAATGAAAATATAATATTTTATTCAAATTTCTGCTTATGTGTACAAAAATTTTCCCCACAAATAAGATAATTAGTGCTATAATAGTCTTTACAATAAAATGTTTTCATCAAGGAGGATAAAATAATGAGTTTGAAAGAATATGTAGCTTTGTTACCTACATTGGATAAGGATACTATATATACGAGTATCCTTATTTTTGTAGTTGTAAGTATTTTTAAACTGCTTCAAAAAACAATAATTTTGGATATGAACAAATGTGATCGTCAAGCTGACAAGGCTATTAAAAAAATTGTTGATCTAATAAAATTGTTAGATAATCCGGTTTTAGATTACAGCAAATTTTATGAAGCATATTTATTCGTTGATATTAAAGAAAGAAAAGAGTTAAAGGCTTATATAGATAATCACGAAAA

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [7,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.70,-7.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//