Array 1 123670-122360 **** Predicted by CRISPRDetect 2.4 *** >NZ_RIAO01000033.1 Escherichia coli strain L906 NODE_37_length_159886_cov_27.235918, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 123669 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 123608 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 123547 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 123486 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 123425 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 123364 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 123303 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 123242 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 123181 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 123120 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 123059 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 122998 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 122937 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 122876 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 122815 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 122754 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 122693 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 122632 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 122571 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 122510 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 122449 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 122388 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //