Array 1 4643208-4644098 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LN877293.1 Bacteroides fragilis strain BE1 chromosome scaffold1, complete sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                                	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	===============================================	==============================	==================
   4643208	    47	  93.6	    29	...A......A.............................G......	GGATCAATGTATGAAGGAGTCCCGTAGAA 	
   4643284	    47	 100.0	    30	...............................................	ACCGTAACAACCGCCGAACTCCACGGACGG	
   4643361	    47	 100.0	    30	...............................................	GTTTCCTATTGTAAGTACATACGAATCATA	
   4643438	    47	 100.0	    30	...............................................	AGGTACGAAGTCCTAACACTTTTATCCGAA	
   4643515	    47	 100.0	    29	...............................................	GAGCCAATAGAATTAGCGATGTCTGGGAT 	
   4643591	    47	 100.0	    30	...............................................	TAAATTCTGGTGTATATGGAATTTGAACAT	
   4643668	    47	 100.0	    30	...............................................	GATATTACCAACTTCAATTTGGCCAGTTCT	
   4643745	    47	 100.0	    30	...............................................	GCAAGCAACTATAATATGCAGGATGACATA	
   4643822	    47	 100.0	    30	...............................................	TACATATCTTTCTCCATTCACATCAAACAT	
   4643899	    47	 100.0	    30	...............................................	TCAATCAATCAGTTTACCTTTATCCGGAAT	
   4643976	    47	 100.0	    29	...............................................	CTACCTCCGATTTTAGCAAGGTTAACAGA 	
   4644052	    47	 100.0	     0	...............................................	|                             	
==========	======	======	======	===============================================	==============================	==================
        12	    47	  99.5	    30	GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC	                              	       

# Left flank :   TCAGGGATGGAAAGAACAAAGCTTTTGCTTCTAAAAGACTTGTTCTTTGAAAACAAAAGACTTGATTTAACAGTGTGTTAAATCAAGTAATAGGAAGAGAGGAAACAAGAGGAGAAAAAGGATTGAGAATGAAGAAAATAGAGAAAAAAGGGGGTATTTTATGGGAAAAGGGATAAGTGGCGGATGGAAAGGGATAGTTGCGATTAGGACAAGCATGGGGGCAGGGGATTTTTAAAAGCAAGGTTGGGAATGGAAGCGGGAGGAGCTTACTGTTAAAGACCAAAGGACAAATTACAAAATATTATCCAATTAACAAACCGATAAACAATCTATTAAATGGTTATTCACAATTCGAAACAGTTTCTAATGGTAACTATATTTAAACCGTCTAATCAGATACACTTAGTAGCATACTTTTCAATTACTAAGTAGAGTACTTTTTAATTATTATCTACACCATCATAAACAGCATATACTATCTGATGAAGACAAAGCGATGC
# Right flank :  CAGATTTCACATAACATATTGTTCTTCAATAAGTTAAGAGTAAATTAGAACAAAGAAAAAGAAGACTGTTTCCAACACAAAATCTCGCATTAATGCGAGATTTTGTGTTCTAGAACAACTCCAATTGCTGTCCCGGCGTATTGACATCTTGCACTTTCTTTCCATAAAAAAGCTCTATATCTCCAAATTGTTTATCTGTAATACACATGATTCCGACATGCCCAAATTCTGGGAGAAATGATTTAACTCTTTTTATATGTACTGCTGCATTCTCACTACTGCCACAATGACGCACATAAATGGAAAACTGAAACATCGTAAAACCATCCTTTTGTAGATTCTTTCTGAAATCGGCATAAGCCTTTTTTTCTTTCTTAGTCTCAGTTGGCAAATCAAAAAGAACAAGCACCCACATAATACGATATTCATTAAAACGATCCATAATCTATCGTTCGGGATAGGAAATTCTCCGAAGCTCTCCATTGAAACATTTATAAAGT

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:65.96%AT]
# 	Reference repeat match prediction:         F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-2.20,-3.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.78   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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