Array 1 130277-128541 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024064.1 Ligilactobacillus salivarius strain BCRC 12574 plasmid unnamed1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 130276 36 100.0 36 .................................... TCACTTGATATCCACCTGGTGTTTTCATGATTATTG 130204 36 100.0 39 .................................... CCGTGCCGTTATCATGATGTTTGGGCTGGCTGGAATGAG 130129 36 100.0 39 .................................... TTGTAACTCTTCTATAGTTTGATAATTTTGTTCACGTGT 130054 36 100.0 36 .................................... CAGGTAGCAGCCTAAACCACCTATATTCAGTTGTCA 129982 36 100.0 36 .................................... CTGAAATACTTTGAATTAGTCGATTGATAACTTTAT 129910 36 100.0 36 .................................... TCATAATTAATTTACCTCTATTCTTATTAATTCTTT 129838 36 100.0 37 .................................... TGAAGATAAAATTTAAAAATCTTCAAAAAAAATACTT 129765 36 100.0 38 .................................... TTATAGTGTTACGGCTACCACTCTCAAGGAAGCTAACC 129691 36 100.0 33 .................................... GCAAAGGGGTTTGTTCTTTGAAAACTAGATATT 129622 36 100.0 36 .................................... TGTTGAAAAACTTTAAAGCGTAGTCGATTTTGTACT 129550 36 100.0 40 .................................... GGTCTGTTGCTTGTTCGTATATTTCATCAATGTACCAATT 129474 36 100.0 41 .................................... AAGTCTAAAATAGTTTGATAATTTTGTTCGCTTGTATTCAT 129397 36 100.0 37 .................................... CGAAGCGGGATATAACAATATATTTATACTCTTGAGG 129324 36 100.0 39 .................................... CCTACTTCCGAGATTTTATTAAATTTTCCAAAGAACGCC 129249 36 100.0 39 .................................... AGCTTTATCTGTTCCTAACGCCTTTAATGCTTTATTGAA 129174 36 100.0 36 .................................... AGTTAGATAATCGAATGTGTCTAGGTCATCAAGGAT 129102 36 100.0 38 .................................... GAAACTTCGTTCGTGCAATAGTTCAAATTGTGTATTCA 129028 36 100.0 37 .................................... AATCATTAAATTTATCTTTAGCCCAACTCACACCAAC 128955 36 100.0 38 .................................... AAGCTTCAATTTTGAAGTTTCAATTTTAAAGTTGTCGA 128881 36 100.0 41 .................................... ACTCCTTTGGTTTTGCCTTGCTCCACATCCATACGCTATCT 128804 36 97.2 37 .................A.................. TGGCTTTATTTTAGGTAGCAGCCTAGACTACCTATAT 128731 36 100.0 42 .................................... TTCGTTCATTAGGTTTATCAATCTTTCATCAAATTTCATTTT 128653 36 97.2 40 .....................G.............. CCTGCTGTTGTTAGTTCGATCATTTTTCTTCATCCTTTCG 128577 35 88.9 0 ............................-....TCT | TT [128544] ========== ====== ====== ====== ==================================== ========================================== ================== 24 36 99.3 38 AGTAAGAACATATCTCCGAATATAGGAGACGAAAAC # Left flank : CAGGATTGAAATTACCGACTTTCATTGAGGAAGGAAGATAAGTATGATGCTATTAGTATGTTTTGATTTACCAAGAGACACGAAAGAGAATAGAAAAGAAGCAACTAAATATCATAAGAAATTAGTAGAATTAGGTTTCACAATGAAGCAATTTAGTGTGTATGAAAGAGAAGTAAGACAAAATTCTACTAGAGATAGAGTAATTAAAGTGTTAAAAGATAGATTACCTAAATCAGGTGCAATTACTTTATATTTACTTCCTAACGAAGTAAATGATTCACAAATAACGATTTTAGGAAGTGAGTCTATAAAGAAAACTGTTAGGAAACCTCAATTTATTGTGTTATAATACACTTACACTGCTGTAAGAAACAGTAGTACAAATAAAAACTTGTCTGAATTTTGACCAAATAATACTTATTAATTTAACCTATTGCCCGTTTAGGGTACCATTAAAAATGTCAATAATTGTTGATATATCAACTAATTGATCAAAGAGT # Right flank : AATTAAAGTGATAAGAAGGAGAGTAAAAGTTAGAAAAAATAATATATAATATAGGTAATTAATTAGAAAGTGGTGTAATTATGACAACATTAATATCATGTATTGGTGATACAGATCCTATAAGAAATAGGCATGATGGAGCTTTATTGCATTTAGCAAGAGTATTTCGCCCTGAAAAAATATTATTAATATACTCTGAGCGTGCTTTATTGAAAGAGAATAATATCTTATTAGCGTTAAATTCTATAGAAGGATATAGTCCTGTAATAAAAAAAGATGAGAGACTTATTTCCGATAGTGAAGTATTTATTTTCGACAAAATATATGAAATATTAAATAATGTAGTCTTAAAGTATTCTAGAGATAATGAGGATTTAATTTTGAATTTATCTAGTGGAACTCCACAAATGAAGTCAGCTTTATTTACTATTAATAGATTGAATGATATTAATGTTAGAGCCTATCAAGTAATAACACCTAGTCATTCTTCAAATGAAGGA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTAAGAACATATCTCCGAATATAGGAGACGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //