Array 1 67583-68738 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCYQ01000012.1 Parabacteroides merdae strain bq_0049 Scaffold_0012, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 67583 32 100.0 34 ................................ AACGGCGAGACTTAAAGGCTTTTTTCGCGATATT 67649 32 100.0 35 ................................ ACAAGAGGAATGAGGGGCATTTGAGCCTTTAACCA 67716 32 100.0 35 ................................ TATTCTATTGATTCTGGTCTGGAAGTCCCGCCAGA 67783 32 100.0 35 ................................ CGAGTCCAGGCAATATCGCGAAAAAAGCCTTTAAG 67850 32 100.0 34 ................................ AGAACGTATCTCTTGTTCGGCTGTTGCACATTTA 67916 32 100.0 34 ................................ TGGATTAAACGAATCCAAACGACTACGATACATC 67982 32 100.0 33 ................................ TGGTGCTCCTGCCTATATCACCAAATATATGGT 68047 32 100.0 33 ................................ TCCCCTCTTGATAATATAAGCGCAACTGACATG 68112 32 100.0 33 ................................ CTGTTTGGAAGGTTGGGGGAATGCTTTTGTTAT 68177 32 100.0 34 ................................ CTCTATGAGTTGCTTGGCCATCTCATCCGATAAA 68243 32 100.0 34 ................................ CGTGTTACCCATCAACACGCACTCATCACCCGCC 68309 32 100.0 36 ................................ ATAATCGGGATATGCACATCCTGACGGATATCTTCT 68377 32 100.0 35 ................................ TGAAAAGGATGTTGTAGCCTATGGCACGCAGGATG 68444 32 100.0 35 ................................ ATTAATCTAAATCTAAAAATCGCTGGGCGGCTCAC 68511 32 100.0 33 ................................ CGAAATACAATGAGGCAACCTGTTGGTGTAACG 68576 32 100.0 33 ................................ AGTTAACACCTCTACCGGTGTGTTAGGGTTCCC 68641 32 100.0 34 ................................ CTTTGAAGGGTTGGAAGATAGCAGTAAGCCGTCC 68707 32 93.8 0 ...A.......................A.... | ========== ====== ====== ====== ================================ ==================================== ================== 18 32 99.7 34 GTCGTACCTTATATAGGTACGTGGATTGAAAC # Left flank : TTTAGATAATTATCCGGTCTTTTTAATGAAGTAAGTTTATGTATGTTCTAGTTACATATGACGTAGAAACGATGACTTCCGACGGACAGCGCAGGTTACGTCAGGTAGCACGTCAATGCCTGAATTATGGCCAACGCGTCCAAAATTCCGTTTTTGAATGCTCTGTCTCGCCTGCTCAATTTACCGAGTTAAGATTAAAACTATCGGATATCATCGATCATAAAAAAGATAGTATTCGTTTCTATTTCTTGGGAAATAATTATTCTAAAAGAGTTGAATACATAGGTGTCGTCACATCCTATAATGTAGAAGATGAACTTATAATATAACTGTTTGCGAACATTAAGCATTAACAAAAAGCTGGAGTTTTCGCAATCATTGATTATTAGCCTATTAAACACTCCTATTAGTTTTATTTCATCAATAAAAAATCCAAAAAGTTTATTATCGCATAAATGCATTGATAACAGACTGTAAATGTTTGCATTATTTGTAATGCA # Right flank : CGAGTAAAACATACCTGCAGTCGACACAATTTATTAAATTATCAATTTCATTATTTTACCATGCAAGACAGAACTGCTCCACCCTTCTTCTTTACACGCTTTTGCATAATCGTCACGATGTAACTTATTATCTATCAGAAACAATTTCAAAAAATGAGTCCAAGTAAGCTTTTTCGATAAATCAGACACTATTTCAAGTTCTGGAAAATATACGCAGAACAACTCCATTTGAAGCAAGTGTCTAACTTCAAATTCTTTACCATAACGTTCCACTAATTCACGAGAAAGATATTTAAATGTATCTATCCGATGATATGATAAAGGGACTGCCTCACATCTGAAGACAGCCCCTTTCAATTGACTTACACTAATAAAATAAATTAGCTGTTTCAACCCACACACCCCGCAAGGTATGACAAAATACCTTGCAAAGGTAACAATCCAATCCTATTTACACAATCACCCTACTTTTTATTCTATCAGCAACAGTTCTTCCACCC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTACCTTATATAGGTACGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //