Array 1 623966-620838 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022389.1 Capnocytophaga canimorsus strain H3936 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 623965 47 100.0 30 ............................................... TCATTCAATTGTATTACAATTGTGCAAATA 623888 47 100.0 30 ............................................... GAAATACGTTCATAACACAAATAGGGCGGT 623811 47 100.0 30 ............................................... TCATTGATTTCTTTTATATTCATAATTATC 623734 47 100.0 30 ............................................... CCGCCGTACGACTTGGGCAATTTTCCAGCG 623657 47 100.0 30 ............................................... AGGCCGAATAATGATTCCAAAGACAAAGTA 623580 47 100.0 30 ............................................... TTGATTGCCATACAGGAACAATCAGAAATA 623503 47 100.0 30 ............................................... TACAAAGGTATGTACATACAACGCAACCAT 623426 47 100.0 30 ............................................... GAAGTACGTCCACAATACAAATAGGGCGGT 623349 47 100.0 30 ............................................... TGAATTATTGAAGCCTTGTTGTCCAACTAT 623272 47 100.0 30 ............................................... TAAAGGTTAATGAATAAACTAAATAACTGA 623195 47 100.0 30 ............................................... TTAGATTAAAACATTTTCAAATAATTATTG 623118 47 100.0 30 ............................................... CCATCTGAGCAGGGGATAGCAGCGAACGCG 623041 47 100.0 30 ............................................... ATATCTCTGCTCAAGAGATGAATAGAAGAC 622964 47 100.0 30 ............................................... GCTCTCCGTAGATGGCTTTCCAAAGCGTCC 622887 47 100.0 30 ............................................... ACAAATTTTATGGCTTCCTGCTCATCGGTG 622810 47 100.0 30 ............................................... TTTTCCTCCATGTTAACCTATCGAATACAC 622733 47 100.0 30 ............................................... TCGCCATTGTGGGCCCCCAGCAGTTGTCCG 622656 47 100.0 30 ............................................... GGTTTACGCCTGAATAACAAACTTTCACGA 622579 47 100.0 30 ............................................... TCACTTTCGACAATTCCAAATTTTGGAATT 622502 47 100.0 30 ............................................... GACTTGACAAAGACAAAAAAGAGTCTAAAA 622425 47 100.0 30 ............................................... TCTTCCATAAATAAAATACTTACTATTACA 622348 47 100.0 30 ............................................... TCCAATACCACACGCATTAACAGCGGTTGA 622271 47 100.0 30 ............................................... CTTATTGGGTTGCAAAAAGGATGAGGAGCA 622194 47 100.0 30 ............................................... TCCATTAGCTCCGTAATCTCCATGTTGAGA 622117 47 100.0 30 ............................................... AAAAAGTAACAAGTAGCAAAACGTTGGTCT 622040 47 100.0 30 ............................................... AGTACAAAATTTGGGGGCTACTTATTTTTT 621963 47 100.0 30 ............................................... GATGCTAAAACATTCATAAACATTCCGTAA 621886 47 100.0 30 ............................................... AATTCTATTTCATCGGAAAGGTCTCGCATC 621809 47 100.0 30 ............................................... GGTGTGTCGCTCGGTATCGGAAGTATGCAC 621732 47 100.0 30 ............................................... TTAAATTCCTCTTGAATAGAAGTAGCTTCT 621655 47 100.0 30 ............................................... TTACTTCCGTAAGTTCGACAAAAACCTGCA 621578 47 100.0 30 ............................................... ACACCATCTTGGCTTTCAACGAATAGATAT 621501 47 100.0 30 ............................................... TAGCATTACATCATTTTTAGAAACAACTTC 621424 47 100.0 30 ............................................... TCACATTCAATGAAATATTGTCTCGCAATT 621347 47 100.0 30 ............................................... TCCGTTAGCAGTAAGCCAATACGTAAGTTC 621270 47 100.0 30 ............................................... AGTGCCTCCTCACTACTGCCAATATGAGCC 621193 47 100.0 30 ............................................... CAATAAAACGAACCCTCCAATCAATTGAAA 621116 47 100.0 30 ............................................... ACCCTTTTTGATATACTCCACCTCTGAAAT 621039 47 100.0 30 ............................................... CTACTCTCTTGATAGGTGCGTTGTCCGGTT 620962 47 100.0 30 ............................................... GAAATACGTTCATAACACTAATCGGGCTGT 620885 47 80.9 0 ........C.........................T..G..AGCACT. | T [620843] ========== ====== ====== ====== =============================================== ============================== ================== 41 47 99.5 30 GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Left flank : ACAAATGCTATACGGGTGAAAAAAGACAAATTTCTTATCCTAAAATGTTATGAATTCCGAACGATTTAACGCTTATAGAATTATGTGGGTAATGGTTTTATACGATTTGCCAACCGAGACCAAGGCAATGCAAAAAGCAGCCAATCTCTTCCGAAAACGCTTGGAAGATGATGGATTTTCTTTATTTCAGTTTTCTATCTATTTGAGGCACTGTCCGAGTAGAGAAAATGCAGAAGTGCATAAAAAACGAGTAAAAATGATGCTTCCCAAATACGGGAAAGTAGCCGTAATGACGATTACAGATAAGCAGTTTGGTGATATGGAAATATTTCATTCTAAAGTACGCGAAGATCCGCCACCTACTTACCAGCAGCTCGAGTTATTTTAGAAATAGAATGAAAAAAATGGATTTACTTAGCCCGATTTATTCTTTTTTTGCTCAATTTTTTATTTCTAAAAATAAAAATAATCCTCTGTCTGTCAGAGGATTATTTTTTGAG # Right flank : ACTGAACACCATTGAAAAAAAAATAAAAACTAATGAAGTAAAGCAATTTACAACGTTCTTGGGGAAAAGCCCCATAAGGTACTCGTTGTCTTTATCCGCCTTGTAATCAAGTTCTAAAAATCTGATATAAATCAATGGTTTTACTTATAAAGATTTCGATGATTTTACTTTTTCATTGCAAAAAGAATTCCTAAATTTGCATACTTCTTTATTGAAAAGGAATTTTTTACTTATCTGTTTAATCATTTTTAATAAATTTTAATTATAAACAATGAATAAATCGGTTTATATAATCACTCCTGATGCTTATAGCGGCAAGTCGTTGGTAAGTTTAGGGGTGATGCAAATGGTTATGCGTAATACTCCCAAGGTAGGTTACTTTAAACCCATTTTGGAGAGTAAAACCCAGAAAGATAATCATATTGCTACAATGCTCGCCCATTTTAATATCGAAATGGAATACGATGAAGCCTACGTATTTACCCGTGCGGAGGTAGCCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //