Array 1 16007-17011 **** Predicted by CRISPRDetect 2.4 *** >NZ_MAMM01000186.1 Escherichia coli strain IHIT25234 NODE_9_length_141767_cov_24.5537_ID_17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 16007 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 16068 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 16129 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 16190 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 16251 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 16312 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 16373 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 16434 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 16495 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 16556 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 16617 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 16678 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 16739 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 16800 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 16861 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 16922 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 16983 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 17 29 99.2 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //