Array 1 79655-82866 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEMK010000020.1 Acinetobacter baumannii strain MRSN2824 MRSN02824_contig00020, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 79655 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 79715 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 79775 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 79835 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 79895 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 79955 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 80015 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 80075 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 80135 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 80195 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 80255 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 80315 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 80375 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 80435 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 80495 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 80555 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 80615 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 80675 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 80735 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 80795 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 80855 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 80915 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 80975 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 81035 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 81095 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 81155 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 81215 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 81275 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 81335 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 81395 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 81455 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 81515 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 81575 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 81635 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 81695 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 81755 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 81815 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 81876 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 81936 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 81996 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 82056 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 82116 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 82176 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 82236 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 82296 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 82357 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 82417 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 82477 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 82537 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 82597 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 82657 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 82717 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 82777 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 82837 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //