Array 1 910671-911294 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_UHDP01000003.1 Staphylococcus intermedius NCTC 11048, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    910671	    36	 100.0	    29	....................................	ACGGCTACAGTTATGACGTCTTTATTAAA 	
    910736	    36	 100.0	    29	....................................	TCAACTCCCCTATTCATTTGAGCGATGTT 	
    910801	    36	 100.0	    28	....................................	TCTTTGTTGTATGTAATTTCTAATTTCC  	
    910865	    36	 100.0	    30	....................................	ATCAAACTAAAATTTTCAAACGGTACTACA	
    910931	    36	 100.0	    30	....................................	CTTGTTGCGTCTTTTCATTATTTACTCGCA	
    910997	    36	 100.0	    30	....................................	AAATTGATGAGGACGTTCTTAAAGAATCTA	
    911063	    36	 100.0	    29	....................................	TCTTTATTGTCGCTATGGTTTATGCACTT 	
    911128	    36	 100.0	    30	....................................	TAAGAAGCTTATGAAGCTTTACAAGGTGTT	
    911194	    36	 100.0	    30	....................................	TTTAGTAGAAGTAAACGAAGCATATACGTC	
    911260	    35	  86.1	     0	.......................T...T.-.G.C..	|                             	
==========	======	======	======	====================================	==============================	==================
        10	    36	  98.6	    30	GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC	                              	       

# Left flank :   TCACTCAACAAAAGAAAACATTTTGATTGTATTATTTCCGGAGTCTCACCTCGGTATTCACGATATTAAAGTATTTATGCAACTTTTAAAGAAGTATCGTTTCACAACGATCGTCTTCACCAATCATCCTTCTATCATCATAAATGAAGAAAACATATTTCTTTGTAAAAGTAATAAAGCGTGTCATGACATAGAAAAAATAAAGGAAGAATTATCGTTATTAATTCCAGAAGAAATGGTAAGTCATCAATTGACTAATATGATTGCATATCACGAATTTTTAGGTGAAAACCTTTCTGAGTTTGAAAGATATTTTAAGTTTATAAACCATTACAATTAAGTTATACTTAATTCAATGATTGACAAGTAAGTAATGACTATGTGACTTACTTTGCGATTGAGTTGGGTAAGACGATTCCTCGTTTTTTATGTTTTACTACTTCTAATAGTGTGAAGCCTCAATTCTCTCCAGAATACAGTTAAGAATTTTGAGATTTGAG
# Right flank :  CCCCACTTTTAAATCAATTACGAACTATATTTACTGCCCTCACTATCTTTTAACTTCAATATAAAGGTATGGAGGGGCATTTTTATTTACGCGAAATGTCCACCAACGTCCCTTTTCCATCTCCATGTTATAATAGCCACAAATGCTCATTAAAACTCAAAAGAAGGTAGGGGAAATCTATGGAAGCAATTATTGCACGACAACCGTTCCAATTATCCGAGGGACAACAGTTTGAAAAGGTCGCACGTGATATACCTACACCAGAGGGACACGATGTTTTGGTAAAAGTCCATGTGACAGGGGTGAACCCGGTCGATACGAAAACGCGTCAAGCGCCTCTCAATGCGAAGGAACGTGTACTTGGCTATGATGCAGCAGGCGTAGTCGAAGCGGTTGGTGATGAAGTTACGGATTTCAAACCAGGTGACCGTGTGTACTATTCCGGCTCCAATCAACGTGATGGTTCCAATCAAACGTATCAGCTCGTAAATGAAAATTAT

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.20,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//