Array 1 1648130-1646115 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033438.1 Pediococcus acidilactici strain ATCC 8042 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1648129 36 100.0 30 .................................... TCCGAGCGTAATGACGTTCCCTAGAACTGA 1648063 36 100.0 29 .................................... CATTGCGGTAGTTGTCCGACCAATGTCGA 1647998 36 100.0 30 .................................... TAACTTTACGCTGGGCTCCAGGAATCATTC 1647932 36 100.0 30 .................................... CACTTGAAAAGTAAGAACTCTCTCTCATTT 1647866 36 100.0 30 .................................... GAAGATAAGCAGTATTTTGATGAAACTATA 1647800 36 100.0 30 .................................... TTGACGATTTGCCCGGGTTTCACCGTGCTT 1647734 36 100.0 30 .................................... ACAACACTGCCGATGGATTAAACCGTAGTA 1647668 36 100.0 30 .................................... TATAAAATTTGGCGGTTCGTGACTTCCCGC 1647602 36 100.0 30 .................................... ATACTCTTTTAAACAATACCAAACACCATC 1647536 36 100.0 30 .................................... TGCCAGTTATTGATGAATTCGTTGGCTTTC 1647470 36 100.0 30 .................................... GGAACCAGCTTCGTAACACCCGGGCGAATG 1647404 36 100.0 30 .................................... ATTCGTATCCTAGATGGTTTGGACGCTTCA 1647338 36 100.0 30 .................................... CCGGTAAACTGCTAAGGTCGCTTAAACATA 1647272 36 100.0 30 .................................... ATTAAGGTAGCCCTGCTGAAAATAGACAAG 1647206 36 100.0 30 .................................... TAGATTCTATTCAGCCATTAATCGACGCTT 1647140 36 100.0 30 .................................... CTTTCCCTAATAAATAATCTACAGAAACGT 1647074 36 100.0 30 .................................... GTGATTGCCAGCGACTTCCCAACAACGCCA 1647008 36 100.0 30 .................................... TGTAAAATCTAAAACTGTTAATCTCGTGTA 1646942 36 100.0 30 .................................... AATGGGACAAGTCAAACCATGGTGCTTATC 1646876 36 100.0 30 .................................... GCCGTTAAGCTCAGAAAGAATAACTAAATT 1646810 36 97.2 30 ...................C................ TAAATTACACGTTCATCATTAACAACATTA 1646744 36 100.0 30 .................................... GTGGACTTACGACACTGCCCATGAAGTTGT 1646678 36 100.0 30 .................................... TACTTACTCGGTAAAACAGATATCGAAACC 1646612 36 100.0 30 .................................... CTTATTATTAATTCATCAAGTAATTAAGCA 1646546 36 100.0 30 .................................... TTTGACCCCAAAGTGCCCTCAAGCCTTGAT 1646480 36 100.0 30 .................................... CCTAAATAGGTTATCATTGGTCGCGCGAAC 1646414 36 100.0 30 .................................... TTGTAACGGATGTTACTCCGCAGGAAGGAG 1646348 36 100.0 30 .................................... CAATGTTGTTGTAATGATATGTGTTCTATA 1646282 36 97.2 30 ..........A......................... GCATTTGAGCAGTGAATTCCCCACAATACG 1646216 36 100.0 30 .................................... CCGCATTGACCATGGAATATCCCATTTCAA 1646150 36 94.4 0 .................G................A. | ========== ====== ====== ====== ==================================== ============================== ================== 31 36 99.6 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGGATGGGCAACGTAACCAAATTCACGATCAGGTCAACCAACTATTTAATACGATTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTACTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGGTTTTGAAGATCCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAGCTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATCGAATTCACAGAAATGGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAATAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : TGACTGAAATTAATAAGAGTTAACGTTTTAAGGAAGTTATCAATAGTATTAGTAGTGAACTTTGAAGAATGGAATTTTAATGAAACTACTAGTTACGGAGAATGATAAACTACTAAGGTTCAAATGAATTTATAGGTTTAGCATTATTACTCGAAGACGACGTTTTAGTGGTGGTTGGAAATAAAATCCGCTCGAAACGATCGGGTGGTTTTCAGTTTGTAAAAGTATACCAATATATTGATATAGTAAATGCATAAAGTTAAGAAAGTGATAAAAACTGGATGATGAAGAATAAAAAGGCATCGCAATAAGCAAATGACAATAGTGACACTAATCATTCAGACGATTACAGATATTGTACAACTCATCACAATGCTTAAAAAATAGGTAAAAGAGGCGATACGTCTCTCTTCTGTTCATCAATTTTAAAATGGAGGCATTAAAATGAAAAACATAGAAAAACTACAATATTTAACTTTGACTATCAGTGTCGTTGCTCT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //