Array 1 1731754-1735382 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM001475.1 Methylomicrobium album BG8 chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1731754 28 100.0 33 ............................ CAGCCGTCTCGGTCGCGCCGCGCAAATTGACTC 1731815 28 100.0 32 ............................ GGTACCGGCCGTGCGCCGTGGTCGCCTCGACC 1731875 28 100.0 32 ............................ ATCGGGTGATAGTCTGGCATCGGTGGTGGTAC 1731935 28 100.0 32 ............................ CATCCAAGGTTGATATCTGAACATCGGAGGCA 1731995 28 100.0 32 ............................ ATGCAAAGGACCACGGTGCAAAAATGGAACAA 1732055 28 100.0 32 ............................ CACCTCACCTCACCTCGCCGCCGCCCCAAGCA 1732115 28 100.0 32 ............................ GGCTGGGTAAGCCGCGCCAGTTATACCACACA 1732175 28 100.0 32 ............................ ATAAATCCCCTGAAGTTTCGCGCGGCCAGGTA 1732235 28 100.0 32 ............................ GATGAAAGTATTCACATGTCGGTTTTTAGTCC 1732295 28 100.0 32 ............................ TCGAAAACCAATTGTTGTCCAAGTATGTCGGT 1732355 28 100.0 32 ............................ AATCTAGCGCCAGCGCGGCGGCGCGCATCCGT 1732415 28 100.0 32 ............................ GGCGAGGAAACCCACGCGGCGGCGTACCGGGA 1732475 28 100.0 32 ............................ AAACGGAAATTTTTTCCCCAAATAGTATTGCA 1732535 28 100.0 32 ............................ GTCATCCCAACCGAAAGCCAAATCCTCGACTC 1732595 28 100.0 32 ............................ CACCGGCGAAGGCTCGATGGCCGGCGAACTCA 1732655 28 100.0 32 ............................ ACATCGTTGAGCCAGCGTTTTACCGGGTGAAA 1732715 28 100.0 32 ............................ AATGAGCGAGCCAGCTCGAGCGCTCGTTTTTC 1732775 28 100.0 32 ............................ TGGAGACCAAGCAGTCTCGGGTTGATTTCGAG 1732835 28 100.0 32 ............................ GCCGGCGAGTATGCGATAGCGTCCGACTGGAA 1732895 28 100.0 32 ............................ GATGGTTTCGTCTCCGGCAGCCGTCAGCACAC 1732955 28 100.0 32 ............................ TCGATAGTGACCTGCCCCTTGTCCTCGATTTG 1733015 28 100.0 32 ............................ GGTGTTCTATGCCAACCGTGACACGCTCGATG 1733075 28 100.0 32 ............................ ATGATGAGCATGGCGGAAATGGCGAACAAAGC 1733135 28 100.0 32 ............................ AACAAGGTGTTGCGTGAGTCCGGCTATTTGAC 1733195 28 100.0 32 ............................ GTGAGCAGAGGGCGCAGCAGCAGGCCGCGATG 1733255 28 100.0 32 ............................ ACTTGCCGACCTCGGGGGATGTCTTGGTGCGA 1733315 28 100.0 32 ............................ TCGATCAAAACGCCTTCGGATGCAGTTTTCTG 1733375 28 100.0 32 ............................ GCAATATCGGCCGGTTCCGCGAGTGTTTTGGA 1733435 28 100.0 32 ............................ GAAATCATCTGGATTGCATTCGGCAACCCGAC 1733495 28 100.0 32 ............................ GCTTGTGCGAAAAATACGAGGGGTTATTAACT 1733555 28 100.0 32 ............................ AACACAGAGCCGCAACTTCGCACCAAGACATC 1733615 28 100.0 32 ............................ GATTCAATTCACCGCAGAAGCTTGAGCATACA 1733675 28 100.0 32 ............................ GGTGTATCGCTCCAGACGCTGAGCAACTGGCA 1733735 28 100.0 32 ............................ ATTTACTGCGCAATGCCTGACGGGCCGCTGTT 1733795 28 100.0 32 ............................ TTGATCTGCGACGAATCCTGGAACAAGCCTTT 1733855 28 100.0 32 ............................ CGACAAATTGCGCTATCCAAATCGCGCAGGCA 1733915 28 100.0 32 ............................ AGGGAGCAGGCGCGGCGATGCAGCGTATCGAG 1733975 28 100.0 32 ............................ GATAAACGCGTACTCAATGCGCTTATCCTTGG 1734035 28 100.0 32 ............................ AGACATAGCCGCAATGAAGCCTCCTTCCCACA 1734095 28 100.0 32 ............................ CACATGATGGCGTAACTCACGACCGTGTATAT 1734155 28 100.0 32 ............................ TATGTCCCAGAATGCCCTGAGCGACAGCAGCG 1734215 28 100.0 32 ............................ TCGTAGATCCTACCGGCGCTCGCCGGTATTTG 1734275 28 100.0 32 ............................ GCGTGAAGATGCACGGCACCGAGGATCATGGC 1734335 28 100.0 32 ............................ GACCTCATAGCGATCTCGCAGGAATGGTTCTT 1734395 28 100.0 32 ............................ ACGATCGTGTATATGACGTGACGTATGAGTCC 1734455 28 100.0 32 ............................ TTCTGACCTTCTCGCGCGCCCGTAATCATTGC 1734515 28 100.0 32 ............................ CACACATGATCATATTGGTCAGGCCGCTTATT 1734575 28 100.0 32 ............................ TTCAATCAAAGTCCACCCGGCCGACTCTACGT 1734635 28 100.0 32 ............................ TGTTGTTATGTGGACAGACGGAGCTGTCCACT 1734695 28 100.0 32 ............................ TCTGAGGTTTTGGTAGAAATCCTTGTCTTGCA 1734755 28 100.0 32 ............................ TGCGATCCATCTCTCAGGCCGTCGTGTGTTCC 1734815 28 100.0 32 ............................ TCGGACTGGCTTTTCCCAGCAGCCACGCCTTG 1734875 28 100.0 32 ............................ TACAGCCTCGTAATAATCGATCATACGCACCT 1734935 28 100.0 32 ............................ AGCCTGCCCCGCTCGATCGGGGATGGCGTGCG 1734995 28 100.0 32 ............................ GCAAAGCCTCAGCGGAAAAGCGTTGGTGGGTG 1735055 28 100.0 32 ............................ GCGTACGTTTCGACCCATTCTAAGCGCTTCTG 1735115 28 100.0 32 ............................ TGCAGTCCCCGCCGAGGCTTCGCGCAGCATGT 1735175 28 100.0 32 ............................ TTCTACCGGAGGGGGTAGCGTGTACACCACGC 1735235 28 100.0 32 ............................ CAAGAGCTATTTGCTCAAGGCGTGGCTGCTGG 1735295 28 100.0 32 ............................ AACAGGGCTGGGGGCAGACGCAAAACGACAAG 1735355 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 61 28 100.0 32 GTTCACTGCCGTACAGGTAGCTTAGAAA # Left flank : CAGTGCAATGTACGGGAATGGCTAAGCCGTCTCAGCGATTATGTCCACTTGACTCAAATCCGCGCCATTCCCGATCGCGTTCGAACCTATGCCTATTACCGGCGCATCCAGTCGAAAAGCAGTAGCGCCAGACTGGCGAGACTGGCAAGGCGCAAAGCCGAACGGGAAAACATCGGTATCGAACTGGCGATTGCAACGTTCGAAAACTGCGTGGAGCAGCGCATCGAGGCGCCTTTCGTATGGATGAAAAGCCAAAGTAGCGGGGAAAGATTCCGTTTGTTTATTGAGTATGTGGAAACCGGTGAACCGACGAAAGGCGGTTTTAGCACCTATGGATTGAGCCATTCAAGCAGCGTTCCCGTTTTTTGACCAATGCCGGAAATAGCTTTTTAAAAATACAGAAAAATCAATTAGTTGTCTTAGATGGGTTTTTCGTTGGTAAAAATGGAAAATTCCGTCCAAGGTATTGTTATGCTTATCTAAATTGAAGTCGATCCACA # Right flank : AAAATGATACCGGAAATTTTGTAAGCGTCTAGCCGTCCCATCTGTTCAAGCAATACCGGACAGTTCATCCTTATTATTTTTGGTGAGGATGAATCATGGCATTATCGAAACGATGGCTCGATCATATCGAAGCCTGGCAAAGCAGTGGTTTAAAGCAGTCTGTTTATTGCCGGCAACACAGCCTTAACAGTCGTACCTTTGCCGCACGGCTATCGGATTACCGCAAGGGTCGAGGCGCCTCACCCTTGGCCTTAATCCCGGTCCGCGTTGAAAACGCCGCCCCCTCCATCGAGCGTCTGGTGTTGCAGTGTCGCCAAGGCCATCGCCTGGAATTGCCGGCTTCAACACCGGCGAGTTGGGTAGCGGAACTGTTACGATGCCTGGCTTGATCGCGAGTCCGGCGCAGATCTGGGTGGCGGTGGCGCCGGTTGACATGCGGCGCGGCCTGGATGGCTTAACCGCGATCGTCCAGCACAGCCTGGGGCATTCGCCGGGTGCCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGTAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1737843-1741352 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM001475.1 Methylomicrobium album BG8 chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1737843 28 100.0 32 ............................ AGACGCCCACCCGTTGTATCCGCCGTCGATGT 1737903 28 100.0 32 ............................ TTGTCGTTCACTTCCTTGATCGCCATGTCGAA 1737963 28 100.0 32 ............................ ATGAATCATGATGAAATGCTGCTGCAAATAAT 1738023 28 100.0 32 ............................ ATAATGACGCCGCCCACAATGAACGTGGTCGC 1738083 28 100.0 32 ............................ GATAAATGCGCTGGCGGCCTGGACGCGCTCGG 1738143 28 100.0 32 ............................ AATAAGGCATTGAAAGGCACCGATGCCGGGAA 1738203 28 100.0 32 ............................ ATTTGATCGCTGCCTCCCATCCCTGCGGAACG 1738263 28 100.0 32 ............................ ATACAGGGGTGATGTTGTGAAAAAAATTCTAA 1738323 28 100.0 32 ............................ TACGGAAGCGACAACCTGGAAGCACTCAGGCA 1738383 28 100.0 32 ............................ TATCAGGTGTGGTGCAAATTGGATGGGGAGAA 1738443 28 100.0 32 ............................ TGTTCTGTCGGATGCCCTGTTTTTGGCCTATC 1738503 28 100.0 32 ............................ AGTCTGCAGGAGCTTGATGGCACCGGCTGGGT 1738563 28 100.0 32 ............................ TTTCAGGAACGTGACGAGTTCTTCCTCGTCAC 1738623 28 100.0 32 ............................ GTAAAGATCCGCCTACCGATTCAAAAATCATC 1738683 28 100.0 32 ............................ TGCCGCCAGTCCTTGACGCCTGCTGCGGGAGC 1738743 28 100.0 32 ............................ AGCCCGTGCGCCGCCCAGGCGCGGGTTTTTGC 1738803 28 100.0 32 ............................ AGGCAAATTGCTCATTTCTCTCTCCTGTGAAT 1738863 28 100.0 32 ............................ CGTTGCCGATGCCGCGAACTCTGACCCGTTGA 1738923 28 100.0 32 ............................ TGCAAGTCCTCGATACACACCATCGCGTGGTT 1738983 28 100.0 32 ............................ TCAACGATACATTGGATGCTGACCATGTATGA 1739043 28 100.0 32 ............................ TCGGGGGATTCCAGCAAGATCGCTGCCTCGGG 1739103 28 100.0 32 ............................ CATGTCGCCTCCAGGCTATTGAAATTAAACAC 1739163 28 100.0 32 ............................ AGTTATCAGCCCTCGGGTACGCCGCCCGGTAA 1739223 28 100.0 32 ............................ AAAGGCGGCTTGCTGGGCGATCGATTCGTGCT 1739283 28 100.0 32 ............................ ATAAACGACCGAGAAACCGCCATCGAGTAATC 1739343 28 100.0 32 ............................ GCCCCAAGCAGCGCGACAATCGACCATTGCGC 1739403 28 100.0 33 ............................ TGTTGAAATTTTTTCTTCTGATGGTCTAATCAT 1739464 28 100.0 32 ............................ AGGGATTTTCGCGCCAATTGGCTTGGACGACT 1739524 28 100.0 32 ............................ ACACCTCGCAGACCCAGCCGCCATCGATGCGC 1739584 28 100.0 32 ............................ ATGAATTGAATGTGGATTTATCAGAAGTTGCT 1739644 28 100.0 32 ............................ AGTAACCCGCAAGGATGCAAATTCCCGACACC 1739704 28 100.0 32 ............................ TTTCGCAACTGGCAACGGACGGAACCAGTAAC 1739764 28 100.0 32 ............................ AGGAGATGAAAGCTGTTGCCAGCGCGGATAGT 1739824 28 100.0 32 ............................ GGAACTCGCCGGGCTTGACCTGGGGGTGGTAA 1739884 28 100.0 32 ............................ CTGCATGAACCCCTGCGCGCCGTCTTGGAGGC 1739944 28 100.0 32 ............................ CTTCCTGATCGGTGACCTTGACGCCCTTCTGA 1740004 28 100.0 32 ............................ TGGAATCGTTGGGCGTTCCGCTTCCTCCGAGA 1740064 28 100.0 32 ............................ AAGGACGAATACAGTACGTTTGTCAGCAAGGC 1740124 28 100.0 32 ............................ TGTCTAACAATCAACAAACTCCCAGCTTTTAT 1740184 28 100.0 32 ............................ GTGAATACAGATTGAAAAAAGGGTTATCGCAA 1740244 28 100.0 32 ............................ AAGCCTTTGCCGTCCAGTCGCTCCGGTGTGGC 1740304 28 100.0 32 ............................ AACCGATGCGAACAAGCGCCATTCCCGCGACG 1740364 28 100.0 32 ............................ AGACGTTTCCGTCAGGCGTGCAAAGAAAAGTT 1740424 28 100.0 32 ............................ ATCCAGCTCGAAGACGGAACTGAACGCATTTA 1740484 28 100.0 32 ............................ CGATCTCCATCTGGTTGATAGGTCGAGACTGC 1740544 28 100.0 32 ............................ AGACAGAAAGCGGCTGATTGGCATAGGTCAGA 1740604 28 100.0 32 ............................ AAGCGAATCCTGACCCAGCGGATGATTGAGGC 1740664 28 100.0 32 ............................ GCTCAACAAAGCCTCATCCATTGGCCCTAAGT 1740724 28 100.0 32 ............................ ATCAACCAGCGGGAATGTGCCGGGTTCAACTG 1740784 28 100.0 32 ............................ GGCAAGGCGGAGGGCATAGGGCCATCCGCCGA 1740844 28 100.0 32 ............................ AAGAGGAACACAGATGGAAGCCAACACTCAAA 1740904 28 100.0 32 ............................ CAGCACGTTCTACGACAACATCACCAAGGAGC 1740964 28 100.0 32 ............................ AGTGACTTGATCGACTCGGCGTTATGGTCCTG 1741024 28 100.0 32 ............................ TTCACGCTGCCGCGCCATGATGGCCCGGCCGC 1741084 28 100.0 33 ............................ ATACCATTGCCGGCAATGTGGCATCCGGAGATA 1741145 28 100.0 32 ............................ TCTTTGATGATCGCTTTTTTCCGGACGAATGC 1741205 28 100.0 32 ............................ TACAAGAATGCCCGGCTATTGCTGCAGCAGCA 1741265 28 100.0 32 ............................ TCGATGTCGAGAGCCTGTTTCAAGACGTGATC 1741325 28 78.6 0 .................CG.....ATTT | ========== ====== ====== ====== ============================ ================================= ================== 59 28 99.6 32 GTTCACTGCCGTACAGGTAGCTTAGAAA # Left flank : AGGTCGTGACCTAACGCCCGCTGAGCGTCAAGCCTTGCGCGCCCAGAAAAGCCTGCCGGCACTGGCCGATCTACACGACTGGCTGCAACGCACCCGCATTCAAACCGCGCCCAACAGCGCCACGGCCAAAGCGATTGATTACAGCTTGAAACGTTGGATCGCTCTCAGCCGTTATGCCGAAACCGGTGATCTGCCGATTGATAACAACCCGATTGAAAACAGTATCCGACCGATCGCTTTGGGTAAAAAGAACTGGCTCTTTGCAGGATCAGAACGTGCCGGAAAACGAGCGGCCGTGATCCAAACGCTGCTCGGCACTGCCAAGCTCAACGGCCTCGATCCTTCGGCCTGGCTAAAAGATACCCTCGAAAAACTGCCTACCTGGCCTAACAGTCGTATCGACGAATTACTGCCTCTCCGCTCAATAGACTAAACCAGAGTGCCGACAGACTGGCTATGTGGTACGGCTGCTCGCTTACGAAATTTTCCGGCATCAATAA # Right flank : TCGTTTGCAGCCAGGCGTTTCAATCTGCGGACGAGAATCGCCGGTATGCGGTTGTGGATCGGCCACACATGGCTCTGACCTTAAAAGAAGGTCTCTACTCGCTGTTGTCGCTAGGCTTGTCTTCGTCGTCGGCTTGATTATCCAGCGAGCCCATCTTGGTAAAAAACACCAGAGATAAAATAACCGCCAGCGCCATTACAATCTCGAAAACCATTCTCAACATTGCCGCCACCTTTGAGTCAGGGATACTTCGGATTCTGATCCGGAATACAAAGGATTGCAAGATATCTTGGAGAGCGAGATAAACGCTGTTAGTGACGTCAAGCCCTATGAAGAATGGGCGCGAACGATTTTCCCGGCGTCAGGATGCCGAAAGCGACATGAATGGCTTGCGCATCAATTGGAAAATGCAATCCATCGCTAGTGGCAATGCCGTTAAGGAGGCTCTGATGAGTTGCAAAGCTAGCTTTGCAACTCATTAAACCGATTGACAAAGCGGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGTAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 1782521-1781942 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM001475.1 Methylomicrobium album BG8 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1782520 29 100.0 32 ............................. CAACTTGGCGAATTCCCCGACATTGGTTTCGA 1782459 29 100.0 33 ............................. CGCGGCGTTAAATATCCCCGGTGAAGATGCCGG 1782397 29 100.0 32 ............................. ATATGGGTCCTGGCGCTATGTCTCCTGATCAG 1782336 29 100.0 32 ............................. TTGGTCGACGCGCTGAAAGGCCTGTTCCAGGA 1782275 29 100.0 32 ............................. ATCATAGCGTTAAATTGGCGCGATAACGCGAA 1782214 29 100.0 32 ............................. CAGTCTTCGAGCAAGTCACCGTCGATCCCATA 1782153 29 100.0 32 ............................. CGGCCTACCTGTTTGAGAGTCAAGATGCTGTG 1782092 29 100.0 32 ............................. TCAATTTCGGCCGCCTTCCGTTCCGCGATGAA 1782031 29 100.0 32 ............................. GCATTGTTTCAAAACAACAAACGAATCCACGC 1781970 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 10 29 100.0 32 GTGTTCCCCACGAGTGTGGGGATGAACCG # Left flank : AAGATGAAGGCCGACCCAGCACACGGCGAATGACCCAGGCTCTGCTGCACGATCGTGGTTAAGCCATCCAGGCCGCGCCGCATGTCGACCGGCGCCACCGCCAGCCAAATCTGTGCCGGGCTCGCGATCAGGCCAGGCATCGCAACAGCTCCGCGAGCCAACTCGCCGGCATCGAAGCCGGCAGTTCCAGGCGATGGCCCTGAGCATGGGTAAAGACAATGACCTCAGTGACAGCCGGTTGAATCTGCACCGGTATCAAGGCCGTCGAATCCTGCTTGGGTAATTTGCGATAATCGCTCAGCCGTGCTGTGAACGTACGGACATTGAGTTGCTGTGCTGCGCAATACGCGGCTTGCGACAAACCACTGCGTTGCCACGCTTCGATATGCTGACGCCATTTCGCTGTGATGGCCATGCTAAAACTCCTGATCAAAAAAATCACAGGATGCCGCAGACGAAAACTATTTTATAGGTGGCTCGGATGGACGCTTACGTGATAT # Right flank : ATGGCACCATCGCCCTAGTCAAGCAGAACGGAAGCAACAAATTGATGTATATGGAAGGCGTGGTGGGCAATGACGGCGTCTTTCACACCGTAAATTCTGGATTTAAAACGCGCGAAAACTATTTAAAAACGAAGACGCTGCTCTGGGATGGGGCGCCGTCCCATCAGCCGTTGCCCCCTAACGCAGTCTCGGGCCAGAACAACGCCTACAGACAGACCATATCACAAACCGAGTTTACCGACAAGCAGGCGGAATTGTATCGCCAAGCGGTTGCCGCACGACGCCAACAGGGCGATATCTTCGAGGCCGGCGCCTCACGGCGCATGCTCAAAAGCGATTCAAACAAGGCGCCGCTGCTGGAAGATGCGCGCGTCCCGGAAAACTTCCTGAACGGCTCCCCTGCCGACGTTGCGCAATTTTTGAAGTCGATGCAGAACAAGCCGCAAGCCTTGCGCGCGGCCGAAGACTATTTGTCGACGCAACTGCGAAACCGCATTTAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGAGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 1785028-1789574 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM001475.1 Methylomicrobium album BG8 chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1785028 29 100.0 32 ............................. CCCGGCAGCATCCGCCGCATGGCTTGACCAGT 1785089 29 100.0 32 ............................. GGGGCGAGGCTTGGCTCCGGCAGCAAAAACAG 1785150 29 100.0 33 ............................. TTTGTGCCGCGCGATCTGAACGTCGGCGGACAG 1785212 29 100.0 32 ............................. ACGAATAAGATGCCCGATAAACAGATGCTCTT 1785273 29 100.0 32 ............................. ATATGGCGGCATCTGGTCACGGTGGAGGATGC 1785334 29 100.0 32 ............................. TCTTTCCTCAGTTGTAGGAAGATGGGTCCGCC 1785395 29 100.0 32 ............................. ATTACGACGAGAATGCGGCGCGGCCGTTCGGC 1785456 29 100.0 32 ............................. AATTGCTGAGCATGTTAAAAACATTAAGCGGC 1785517 29 100.0 33 ............................. CATGATCGATGTCCCATAAGAAAATCCGACGGG 1785579 29 100.0 32 ............................. TCGCCTTCGCGCATCTTGTGCTTGGCGAGCAT 1785640 29 100.0 32 ............................. TGCAGCTGCCTTTCCCGGGTAAGACCTTCGGC 1785701 29 100.0 32 ............................. ATTACGACCGGTTACTACCCGGTCCAACACTC 1785762 29 100.0 32 ............................. CGCATGCCCTCGCTCATGTCGTGCAACCCGAG 1785823 29 100.0 32 ............................. CCGTGGCGAAAAAGGTGAGGCAGAACAGTATC 1785884 29 100.0 32 ............................. GCGTCTACAGCGGCGGCAAAATGACGCTGGGA 1785945 29 100.0 32 ............................. GCATCGTTGATCGCCGGGACCGCCTTTTTGAG 1786006 29 100.0 32 ............................. CGCCTTGTAATACTCGCGGCTGAACACATGCT 1786067 29 100.0 32 ............................. ATCAAGTCATACAGTTCCTGGGTACTGTACGG 1786128 29 100.0 32 ............................. TCAGTATGACACAGCATCCCCTTGAAACAAAC 1786189 29 100.0 32 ............................. TGAATCGGTCGGATGTGCTGACCGTCCTGCGC 1786250 29 100.0 32 ............................. TGACGGTCAATGACTTGACCTTCAGTCTCCAA 1786311 29 100.0 32 ............................. GGTACACGTTGATCACGAACATCGACCTGGTC 1786372 29 100.0 32 ............................. GAGGAGAGCCTAGGCTCTCCTCCTCCCTCAAT 1786433 29 100.0 32 ............................. AGGTCGATGTCCGGGTCTATGACCTGGACAGT 1786494 29 100.0 32 ............................. ACTTTCCACCACACACGACTAATTGCGTTCCG 1786555 29 100.0 32 ............................. GTCAGTCCGCCCTTCACGACCCTGATCCCGGC 1786616 29 100.0 32 ............................. TTTTTTCACCCGGTCGGGGACCGGTGACCGGG 1786677 29 100.0 33 ............................. GATGGGACACCGGCTTGACCGGGATACGCGGTC 1786739 29 100.0 32 ............................. AGACCTTGACCCGGATGTACCTCCGGAAAGAA 1786800 29 100.0 32 ............................. CGCCATTGTCTAACCTTTCTTATTTATCATGA 1786861 29 100.0 32 ............................. ATATCCGAGGGATTGACCACATAGACCCCATG 1786922 29 100.0 32 ............................. GGTCGGTGCTGTCGGCGTTCGGGACCGGTTCC 1786983 29 100.0 32 ............................. CCCGTATCGGGATGCGACCATCAGACGCCATC 1787044 29 100.0 32 ............................. ACCCCGACACTCGGGGAATCGTTTATCCGGAT 1787105 29 100.0 32 ............................. ACGAACGAAACCAGCGCATCGAACTGGTTCTG 1787166 29 100.0 32 ............................. GCGTGCAATTTTAGTGAAACGATCACGGCGGC 1787227 29 100.0 32 ............................. TTCAAAACCGGCAAATCGCCGGTTTGACGGCT 1787288 29 100.0 32 ............................. GTTTTCGAAGACGGCGCTGAGTCCTACGATCA 1787349 29 100.0 32 ............................. TTTCTTTTCTTTGAACTTTTCCACGATACTGA 1787410 29 100.0 32 ............................. GGGAAATAATTGACTGTTGTTGGCAATCCATA 1787471 29 100.0 32 ............................. TTTACACGTTATCTCAACTGACCGTTTAGAAC 1787532 29 100.0 32 ............................. GCCGAAGTTGCTGTTCGGCGTGTACATCACGT 1787593 29 100.0 32 ............................. CCTACGATGACATAATACCTACGCCTTCAGGA 1787654 29 100.0 32 ............................. GCGGTCGTGCCGAACGCACCCAGTTCTTCGTA 1787715 29 100.0 32 ............................. TACTACCCGCTCCTCTCCTCCAAAGCCGAATC 1787776 29 100.0 32 ............................. TGCATACGCGAGGTGCAAAAAACGCTGAAGGA 1787837 29 100.0 32 ............................. TCAACAAGAAGGGCAACACCTCCAGTAACTAC 1787898 29 100.0 32 ............................. CCCCCCGGACGAACCGGGGATTAATCGGAGAA 1787959 29 100.0 32 ............................. ACCACCTACTTCTGCCGTCTGGGTGAAGTTGA 1788020 29 100.0 32 ............................. TTGGTATCGTAGCTGACAGAGACTTTGTCAAC 1788081 29 100.0 32 ............................. CCACTGGAGGACCGATGAACACCACCGAAGGA 1788142 29 100.0 32 ............................. GTCAGGTTTTCTCGTAGACCTTCAGAGAGGCA 1788203 29 100.0 32 ............................. ATCGATCATACAACCACGAAGATTATCTTTGA 1788264 29 100.0 32 ............................. ACAGCGGCTTGATCAACACCGTCTCGTTCGGC 1788325 29 100.0 32 ............................. CGACCTTCACGTTGTTCTACACGACCAATAAC 1788386 29 100.0 32 ............................. GACCTGCCCGAGAAGCTGGAACGGGACGATAC 1788447 29 100.0 32 ............................. TACCCGATCCTGGTCCATAACACGCTGCTCCC 1788508 29 100.0 32 ............................. CGATTGCTGTTATGACCGCCAAACGCACTCAT 1788569 29 100.0 32 ............................. CGTTTGGCGAGTCATCCGCACGGGCCTCATGC 1788630 29 100.0 32 ............................. GGCGTCGTAACCGCCAACACGGAGAATCAGCT 1788691 29 100.0 32 ............................. GTGACGGCTAACTTGATTTAACTGCATGAATA 1788752 29 100.0 32 ............................. CTCCTGGAGCAGGACGTTAAACAAACCGCGCT 1788813 29 100.0 32 ............................. GTAGAGGCGTCGAGTGCGCGAGTCATAGAAAC 1788874 29 100.0 32 ............................. ACCGGCGCCACGGTCAAACTCGCAGGCGTGAT 1788935 29 100.0 32 ............................. TTTTCACTGGCGGTTGGAAAACTGGGATAAAT 1788996 29 100.0 32 ............................. TCCAACTCCGAGAGGCCCGCGAAGCGGCGGGC 1789057 29 100.0 32 ............................. TATTTCAACAGAGTTAGAACGACTCAACTACA 1789118 29 100.0 32 ............................. CCGCGCCATTTGCGGCTTTCAGGCTGTAGGAC 1789179 29 100.0 32 ............................. CGATATATCGAATCCGAACGAGGAAGGAAAAC 1789240 29 100.0 33 ............................. CAGGGCGCGGATGTCTTCGACGCGCCAGGCAAC 1789302 29 100.0 32 ............................. GCGATCATCGGTATTTATGATGCCGCACTGGG 1789363 29 100.0 32 ............................. TATCCAAAACCCGTTAAGCTTGGAGCCCGGAC 1789424 29 100.0 32 ............................. GCAGGTTTCGACATGGCGATCAAGGAAGTGAA 1789485 29 100.0 32 ............................. CATGCGGTCGGCGATGTGGAGTTTGCGCTGGG 1789546 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 75 29 100.0 32 GTGTTCCCCACGAGTGTGGGGATGAACCG # Left flank : ATGGGCGCCAAGCCCTGCGTGTCGAAAAAACGCTGCCGACCTTGGCAGCCTTCCACGACTGGCTTCAGCAAACCCGTTTGCGCACCGCGCCCGGCAGTGCCACCGCCAAAGCGATCGACTACAGTTTGAAGCGATGGGCTGCGCTCACGCGCTACGCCGAGACTGGTGATCTGCCGATCGACAATAACCCGATCGAAAACAGCATTCGTCCGATTGCATTGGGCAAAAAAAACTGGTTGTTCGTAGGCTCCGAACGCGCCGGCCAGCGTGCCGCCATCATTCAAACCTTGCTCGGCACCGCCAAGCTCAACGGGTTCGATCCAGCGGTATGGCTAAAAGAAACCCTGGAAAAGCTCCCAACTTGGCCCAACAGTCGCATCGACGAGCTTCTGCCTCTTCGCTTCGCGGATTAAATCATAACGTTTTAGTCCTGGCTATGTGGTTCCGCTGGCCGCTTACGATGAACCGATAGGAATGAGATTTTACATTTGCGGTCGCCC # Right flank : GTAAGCGTCCATCCGAGCCACCTATAAAATAGTTTTCGTCTGCGGCATCCTGTGATTTTTTTGATCAGGAGTTTTAGCATGGCCATCACAGCGAAATGGCGTCAGCATATCGAAGCGTGGCAACGCAGTGGTTTGTCGCAAGCCGCGTATTGCGCAGCACAGCAACTCAATGTCCGTACGTTCACAGCACGGCTGAGCGATTATCGCAAATTACCCAAGCAGGATTCGACGGCCTTGATACCGGTGCAGATTCAACCGGCTGTCACTGAGGTCATTGTCTTTACCCATGCTCAGGGCCATCGCCTGGAACTGCCGGCTTCGATGCCGGCGAGTTGGCTCGCGGAGCTGTTGCGATGCCTGGCCTGATCGCGAGCCCGGCACAGATTTGGCTGGCGGTGGCGCCGGTCGACATGCGGCGCGGCCTGGATGGCTTAACCACGATCGTGCAGCAGAGCCTGGGTCATTCGCCGTGTGCTGGGTCGGCCTTCATCTTCCGCAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGAGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 1793024-1790553 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM001475.1 Methylomicrobium album BG8 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1793023 29 100.0 32 ............................. TGTTTCTTACGTTGGCGCCAATGCCAAACTGA 1792962 29 100.0 32 ............................. CTTATCTTTGCAGATACTCTAACAGAGGATGA 1792901 29 100.0 32 ............................. GTGACGGATGGCTTTGCGTCCCAGATTAAAAA 1792840 29 100.0 32 ............................. CCGGAGTCTGTATGGGTTGAAGCGGCTAAAAT 1792779 29 100.0 33 ............................. CATGACGACGGCGCAGATTGAGATTCCTGACAA 1792717 29 100.0 32 ............................. TACCAGAAAAATACCCGGTAATTCTCGGTATC 1792656 29 100.0 32 ............................. CAGGGTAAGGCTTGGAAATGGTTGGAGTGCAG 1792595 29 100.0 32 ............................. ATTTATCTCCCGCACGATGGCGTAACTCACGA 1792534 29 100.0 32 ............................. CAATCTGAACGCCGTCCGGATTGCCGTCATAC 1792473 29 100.0 32 ............................. CTAGTGCCGGTCTTTTCCGGTGAGGCGCGTTA 1792412 29 100.0 32 ............................. CAATCGCCGCTTTAATCTCGGCAAACGATGAA 1792351 29 100.0 32 ............................. CCGTTGTAATAAGCCTCCGTGAACTCGGAGGC 1792290 29 100.0 32 ............................. GCTTGACGCTCATTACTTCTAAGTCGAAAAAG 1792229 29 100.0 32 ............................. TCGGCGTATTCAAGGGTGGCCGGCGGTTGCTG 1792168 29 100.0 32 ............................. CTGGCGAACTGACCATATTCGAAGCGGTACAG 1792107 29 100.0 32 ............................. GCGATCAACGCCGAAGAATTCAGCGACCGCGT 1792046 29 100.0 32 ............................. GGCCGGAAAACTATCGTATTCGCGGCATCCGT 1791985 29 100.0 32 ............................. ACGCCAAAGAAACTGCCAAATGGCATTTTGGT 1791924 29 100.0 32 ............................. AACCCTGGATTTCGGCAATGCCCGCAAAGCAA 1791863 29 100.0 32 ............................. ATTTCATGCGCTTTCCGCTGGCATTGGTCGAC 1791802 29 100.0 32 ............................. GTCGCGTTCGCCGAGAGCGATCTGGACCATGC 1791741 29 100.0 32 ............................. GCGCTGTCGGCAACATCACTTCTTGTCACTGG 1791680 29 100.0 32 ............................. GCCTTTCCTAAAAAAATTTTTCCCGAGGCAAC 1791619 29 100.0 32 ............................. TTCCTGGTTATCAATAGCGCTAGTTCGGGCAG 1791558 29 100.0 32 ............................. TTGAATCTTTGGCGCCGGGAAGCGGTCGTGGA 1791497 29 100.0 32 ............................. CCCATTTGCGCACGCACGGCGACACGACGCGC 1791436 29 100.0 32 ............................. GCCGCCTTGCGCAAAATGGGAGTAACCCAGAA 1791375 29 100.0 32 ............................. CACCATGAGGACCTGATCGACCAGGCAGAAGA 1791314 29 100.0 32 ............................. GCCCGGGACGGATGTCGGCCAGGCAACAAACC 1791253 29 100.0 32 ............................. CCAGGGGGATGCGCTTCGAACTGCGCCAACAG 1791192 29 100.0 33 ............................. GACATGATCGAGGGTGCGCTATCGGCTGTCGGC 1791130 29 100.0 32 ............................. GATGTAAATCAATCGCCCGTGCCTCAAACTTG 1791069 29 100.0 32 ............................. ATCCTGGTCGATAACGGCGCGCCGCAGTCCGA 1791008 29 100.0 32 ............................. GGATTGAAGATCCCGGTCGCCGGCGGCCAAGG 1790947 29 100.0 32 ............................. ATCGGCGCCGTCTTGATCTTTAGCGTTGTTGT 1790886 29 100.0 32 ............................. AGGGTGGCTTCGTCTGTCATATTGCCTCGTTC 1790825 29 100.0 32 ............................. ATCGGCGCCGTCTTGATCTTTAGCGTTGTTGT 1790764 29 100.0 32 ............................. CCTCGTCTTCATCTGCTACCGGTTGGGCATTT 1790703 29 100.0 32 ............................. CCGTCTTTTGTCATTTCGTACATCTGGCGCTT 1790642 29 100.0 32 ............................. GTGTCTGAGCATTTTGGGAAGCGTCACAAGAA 1790581 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 41 29 100.0 32 GTGTTCCCCACGAGTGTGGGGATGAACCG # Left flank : AAAATCATTCCCACCATCGAAGACGTACTGGCCGCCGGCGACTTGGAAATTCCCAAGCCCGCCGAAGAGTCCGTACTCCCCGCCATCCCCAATCCCGAGAGCATCGGCGATGTTGGTCATCGTAGTTGAAAACGTCCCGCCCCGGTTGCGGGGGCGCCTTGCCGTCTGGCTGATCGAGATTCGTGCCGGGGTTTATGTAGGCGATTTGTCGGTCAAAGTCAGGGAAATGATCTGGGTACAAATCGAGAATGGCATCGAAGACGGCAACGCGGTCATGGTCTGGACCACCAATACCGAACCCGGTTTCGACTTCATCACCCTGGGCAAAAACCGCCGCCTGCCGGTCGAGTTGGACGGCTTGAAACTGGTTTCGTTTTATCCCGAGGAAGACCCGAACGATCAGAATGCTCTTTAACAATTTAACGTTAAAAAACCGGCAAAGAATCGGTGGAAATTTTGAGGCGATTATTTCGCTTGTCTAACAATGTGTTAGGATAAGT # Right flank : TAAGCGTCCATCCGAGCCACCTATAAAATAGTTTTCGTCTGCGGCATCCTGTGATTTTTTTGATCAGGAGTTTTAGCATGGCCATCACAGCGAAATGGCGTCAGCATATCGAAGCGTGGCAACGCAGTGGTTTGTCGCAAGCCGCGTATTGCGCAGCACAGCAACTCAATGTCCGTACGTTCACAGCACGGCTGAGCGATTATCGCAAATTACCCAAGCAGGATTCGACGGCCTTGATACCGGTGCAGATTCAACCGGCTGTCACTGAGGTCATTGTCTTTACCCATGCTCAGGGCCATCGCCTGGAACTGCCGGCTTCGATGCCGGCGAGTTGGCTCGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTCCCACAGCAACAGGCGCAAGCGGTGCCGGCACGGTTGCGGAAGATGAAGGCCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGAGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 2588126-2580683 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM001475.1 Methylomicrobium album BG8 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 2588125 37 100.0 33 ..................................... AATTGCGCTAAATCAAAACAATATGACGCTTGC 2588055 37 100.0 35 ..................................... CATATATGCAGAGTTCAATGTTGAGCATGTCTGCA 2587983 37 100.0 35 ..................................... CGCTATTACTAGCGCACTCTAATTACTTACTTACT 2587911 37 100.0 34 ..................................... CTAGCGCTTTTTGAAGCGCTTCAAATAACGCTTT 2587840 37 100.0 34 ..................................... CTTATTAAGTAAACTCACTTTCGTTTCTTTTGAC 2587769 37 100.0 35 ..................................... TAGTCTAATATTGTTGAGTGCTTCTCATCGTTGAG 2587697 37 100.0 34 ..................................... TGTTTTTCGTCATTAAGTAACTGCGCAGCGTCGA 2587626 37 100.0 33 ..................................... AAATTTCATATCTTTATCTCAATATTAATTAGA 2587556 37 100.0 31 ..................................... GCTTATAGCGATCAGATTAGATTGAAGTTCG 2587488 37 100.0 34 ..................................... AATGCGCTCAAAACATAATCGAGAATAGACGACG 2587417 37 100.0 36 ..................................... ACATTGTCTGCCGCCAATTGCTCTTGGCCGTCCCAT 2587344 37 100.0 35 ..................................... TCATAATTTTAGATGACACGCGACACGTAGCCGTC 2587272 37 100.0 35 ..................................... CGGCCCGTTGTTGTTTGACGAAACCACCCAAGATT 2587200 37 100.0 34 ..................................... AACTTCCTTAAACCCATATTCTTCTATATAAGGT 2587129 37 100.0 36 ..................................... TAGTTTTTAATAGTCTGCCCATTGTATAACTTTGAC 2587056 37 100.0 35 ..................................... CAAGCGGCTTAATGATAGGGTTAACGTACTACCTT 2586984 37 100.0 36 ..................................... GCTTTAAAGCGCTCACAACATAATCAAGAATCGACG 2586911 37 100.0 34 ..................................... GCTCATCTTTGTGATGAGCGTGCTTTTTTCGTCA 2586840 37 100.0 35 ..................................... CTCAATTTCAATTTTAACTTCTGCTGCACGAAATG 2586768 37 100.0 36 ..................................... TTTTACTTGCTCTGCTTTCTGAGAGCTGCAATCGAT 2586695 37 100.0 34 ..................................... GCGCTATTGTTGTTGAATACTGTGATATCTTTGT 2586624 37 100.0 33 ..................................... GCGCAAGAATCTTTGTCGTCAGAGCGAACTAAT 2586554 37 100.0 35 ..................................... GCATGGAGCAGGAACAGCAGTGGAACGATTTGGAA 2586482 37 100.0 32 ..................................... ATAACCAGCTACTACATATGTGCCTTTCATTT 2586413 37 100.0 35 ..................................... CTTTGTGTTTTGGTACATATGAGCCAGGAGGAAAT 2586341 37 100.0 35 ..................................... GGCAAAAAATATATTGAACCATACCAGCATCAAGA 2586269 37 100.0 35 ..................................... CTTTATGTTTTTTTCAAGAAGTGCAGATTTCTCTG 2586197 37 100.0 33 ..................................... GACGCAGTCTTGTAAGACTTCGCGTTCATTAAA 2586127 37 100.0 33 ..................................... GCTTTTTTGAAAGCGCTATTGTTACTGAAGACT 2586057 37 100.0 33 ..................................... AAAAAAAGCTAACGCTTTTACAGCGTTACTCAC 2585987 37 100.0 34 ..................................... GATGCAGTTTTGTAAGACTGCGCATTCATTAGAT 2585916 37 100.0 35 ..................................... TGCAGATTTCTCTGCACTTGCATTTATCAAATTTG 2585844 37 100.0 35 ..................................... CTGCGCTCTACAATCATCATCACGATAGAATTTTC 2585772 37 100.0 34 ..................................... GTAACACTGATTGCTGATAGCGCACAATGCGTCT 2585701 37 100.0 33 ..................................... TAGATATTCGAGTGTAGAAACGCTCGAATGCTT 2585631 37 100.0 33 ..................................... CGATGCAGTCTTATAATTGCTGTAATTCATCAG 2585561 37 100.0 34 ..................................... GATTGTTCATGACAATACTCTCTACAAGAAGAAA 2585490 37 100.0 33 ..................................... ATAAACTCAGAATGGAGCGATTTCATCTGGTCC 2585420 37 100.0 35 ..................................... AATCCCGTACGGTTTGAACCCTTTCTTGGTGATAT 2585348 37 100.0 34 ..................................... CCTCTACACAGAATTGTGTAGTGAGTTGTAAAAA 2585277 37 100.0 36 ..................................... AAGTCTAACAGGTGCATAGTGTCTCCTTATGGGGGT 2585204 37 100.0 36 ..................................... GGTCACGGACCAAGGAATCAAACGCAGTGCCACGAT 2585131 37 100.0 33 ..................................... TTCGTCAAAAATGTAGATTTCAGTGCTGAGTAT 2585061 37 100.0 34 ..................................... CAATCTTGTTAAACAGGATGACTTGTGACATTTA 2584990 37 100.0 35 ..................................... CCGACGAGCTCTTGGAAGCGTGTTGCGATGCTGCC 2584918 37 100.0 34 ..................................... CTGTGATTCATTAGATATTCGAGCGTTTCTACAC 2584847 37 100.0 34 ..................................... TTTCAGAAGCTCTGAAAGATGCAATTTTTTGATT 2584776 37 100.0 34 ..................................... ATGTTCTCCAAAAGTAGTGATTTAGGTTAGGTTT 2584705 37 100.0 31 ..................................... GAGGAGAACTGCACTATGTGGTCATCCATAT 2584637 37 100.0 34 ..................................... TGAACCATGATTTCTTTTTTCATGTTGCTCATTA 2584566 37 100.0 32 ..................................... ACAAATTGCCTTGATAACCAGCTACGACATAT 2584497 37 100.0 34 ..................................... TTGATGCGTTATGCCTGGATAAACTGCCTCAATC 2584426 37 100.0 34 ..................................... ATATAAACCGTTGTGTCAGTTGGTTTAACGAATC 2584355 37 100.0 35 ..................................... CGGAGTCCCATTGGTTGATTGCCGCCACTGGGTTT 2584283 37 100.0 35 ..................................... GTTGATTGCCGCCACTGGGTTTATTGCGGCTTTCT 2584211 37 100.0 36 ..................................... AACTCTTTACCAACATTATAAAAAGTCACCGCTATT 2584138 37 100.0 34 ..................................... AGTAAATTCAGTAACATCTTTGTCATTCTCGTCA 2584067 37 100.0 34 ..................................... TAGCATTGATTTGTGAGCGCGCAAAGCGTGTCAA 2583996 37 100.0 35 ..................................... GTGCAGTTCTCTGCACTTATGAGATTGAAGAACGC 2583924 37 100.0 34 ..................................... CAACATCTGCTGCACGAAATGCAGCAATTTTTTG 2583853 37 100.0 36 ..................................... TTTTTCGTCATTGAGAAGCTTGGCAGCGTCTAAAAT 2583780 37 100.0 35 ..................................... ACAGTATTCAGTAACATCTTTGTCATTCTCGTCAA 2583708 37 100.0 34 ..................................... CTCCATGACCCAGCGAAGCTTTGCAACATCTAGA 2583637 37 100.0 34 ..................................... CGATTTTTCTTTGCAAATCAATCGCTTGAATCTG 2583566 37 100.0 33 ..................................... TCATATTTCACCTTAACTACATCCAATAAATTC 2583496 37 100.0 33 ..................................... TCATATTTCACCTTAACTACATCCAATAAATTC 2583426 37 100.0 35 ..................................... CAGCGGCAGCTTTTTTGTTTTGTTTTTCAGTAGTC 2583354 37 100.0 37 ..................................... CGACGTAAGCCATTGCTGGTTTGCCATTTGAGAGGTC 2583280 37 100.0 32 ..................................... GTAAGGGTTAACAACGATGCTTCGCTACCCCA 2583211 37 100.0 35 ..................................... CCTGCCAGCTCCTTCTCGTTTTCCGCCTGCCATTG 2583139 37 100.0 34 ..................................... ATGAGGATTCAGCCTCTATGCTGCCAACGAATTT 2583068 37 100.0 34 ..................................... TAATTGTTCTTGACCTTCCCATTCTCCAACAGAG 2582997 37 100.0 34 ..................................... GTGGGCAACCGGGGCGGAGTTGTTACTTCAAATT 2582926 37 100.0 35 ..................................... GTCAATTTTGTTGTATGTATTCGCGGTAATGTTCG 2582854 37 100.0 35 ..................................... TTTTCTGCAGGCTTCTTCATTTCGATATAAAGACC 2582782 37 100.0 36 ..................................... CGGTTGATACGGCGGCAACTTCGACGCGCGATACAG 2582709 37 100.0 33 ..................................... TAATTTGATGTTATTGGTTTTGATGGGCGAGCA 2582639 37 100.0 34 ..................................... AGCTGCTTGCCGCAACTGTTCACCTACCTGACGA 2582568 37 100.0 30 ..................................... CCGGAGGTTTTTTGATGTTGGGCTCGATCA 2582501 37 100.0 33 ..................................... GGCCGGGACAGGTCCACCTTTTTGGTGGTTAAG 2582431 37 100.0 32 ..................................... GTCAGGCCCGCGATTGCCCGGCCTATTTCCAT 2582362 37 100.0 35 ..................................... GAAGCGGGGGCAAGTTGATAGAGTGCTACGGGCGC 2582290 37 100.0 35 ..................................... GCATTGCCCAGGTAGCATCAGAGGCCCTTAATCCC 2582218 37 100.0 33 ..................................... GCGAGCCGCATAGGCGGTTTTTTCGTCATCTGT 2582148 37 100.0 36 ..................................... ACCGTAATGGCTGAGGCAAAATGATTTTGCGGACTC 2582075 37 100.0 36 ..................................... TATTGTCCGTCGAACAGATGCGGCTCCAGTACGGCC 2582002 37 100.0 34 ..................................... TCGTAGCGCTCGATCATTGAGCGCAGAACGGTGG 2581931 37 100.0 34 ..................................... GCAGACTTCCATTTTGCTCCTGTGTCCGAAATCT 2581860 37 100.0 35 ..................................... TTGCTACCTCGAACCGCACTCGAAACTAGTGAGTG 2581788 37 100.0 34 ..................................... TGTTTGTCCGCAGGGTAATTGCGGAGTGCTTTCT 2581717 37 100.0 37 ..................................... CCAATTGGGCAGCTACAAACAGCCCAAATTTTGCCTC 2581643 37 100.0 32 ..................................... AAGCCCCTCAGAGATTTCCATTTTGCTCCTGT 2581574 37 100.0 35 ..................................... AGGCCGGTCAAAACTCTTTCTCTAAGATTGTTCAT 2581502 37 100.0 35 ..................................... AGGCCAGCCTTTGATACGGTCACAGCCAGTATTTT 2581430 37 100.0 35 ..................................... TCGCGGTCCAGAATCCTCTTTCCATCCGCTCGATG 2581358 37 100.0 34 ..................................... GAGTGATCTTAGTCTCTTTACTCATTTTGATAAT 2581287 37 100.0 35 ..................................... AGCAGCTCAGCCGTCAATCGATTCTCGGCAATACC 2581215 37 100.0 32 ..................................... GCTTTCAAATCGCTAACAGCGATTAAGTTTAA 2581146 37 100.0 34 ..................................... AGTTTTATAATTACTGCTGTTCATCAAATATTCA 2581075 37 100.0 34 ..................................... GCGCAAAAGCATGTCCTTGTTTTGCGCTTAATCT 2581004 37 100.0 34 ..................................... GCGCTTGGTTCGTGTTGTTTTTACTCATGGTAAT 2580933 37 100.0 35 ..................................... ATAAGAAGAAATAATAGTTTGAATGTTTGAAATTC 2580861 37 100.0 33 ..................................... TGGAACATCATGGCCTTTCCCCTCAGAAAAAAA 2580791 37 100.0 35 ..................................... GGAGGACTTTATGGGTGACCCAGCGCTTGAAGGGC 2580719 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 105 37 100.0 34 ATTTGAATAACAGACCTTATAAAGAAGGGATTAAGAC # Left flank : GGCCCGCTTTACCGCCAACGGCGGCTGGCTGGAAATGTTCGCCTATGCGGAATGCTTGGGGCTGAAGAAAGCTTCGGGCATCCAGGATATTGCCTGTAACATTACGATAAGCCGGCACCCTGCCGGAAAAACAGCCGTAAAGAACGAAATCGACATCGGCCTGATCAAAGCTAACCGGCTGCATTTAATCGAATGCAAAACTAAAAGCTATAGGGACTCGGCGCAAGGCGCGGATGTATTGTATAAACTCGACAGCCTGCGAGATTTGATGGGCGGCCTGCAGGGCAAGGCCATGCTGATCAGTTTCAATACGCTGGACAAAAGCAGCCGTGCCCGTGCAAAAGAACTGAACATTACGCTTTGTAGTCTCTCCGAGCTGAAGAATTTACAGCAGCAACTGAAAAAATGGCTCAGTCCCAACGGTTAACTTTTCAAATATGAAAAACCTTGGCAACCCTATCTGTAACCATCTGAAAAATAGAGGAGAGTATGAACGAGCT # Right flank : CTAGTTTTTGAATTGTACCTTTTTATGCGCCGCAGCTTTTCCCTTGTAAACCACAGCTTCTAAATCGGTACGCTCTTCCTCCGTGAGTCGCACTCTGTATTGCTTAGCCATATCGCCACTCTCATCAGGGAAATTCCTCGATAGGGGACTACTGATCCGACATTTCAAGATTGACTGAGTACTAGGCTAAATTGAGGATTGCCGAGATCATTTCCGGGAATTGTCGCTAATGCCCGATAAAGGCTAAAATAGTGGGCTAAATCCCTTCAATTCACAATGGAATTCAATGACAATTACTACACGTTTTGCTCCGAGCCCCACCGGGTACTTGCATATCGGCGGTGCCCGTACCGCGCTTTTTTCCTGGCTTTACGCCCGCAAGCATGGCGGCGACTTTATCTTGCGCATCGAAGATACGGACCTCGAACGTTCCACGCAGGAATCGGTCAATGCGATTCTCGAAGGCATGACTTGGCTCGGCCTTGAATACGACAAAGGAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGAATAACAGACCTTATAAAGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 7 3133610-3123009 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM001475.1 Methylomicrobium album BG8 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 3133609 36 100.0 38 .................................... ATTTGCATTCATTTCGTAATTTTGACCAACACTTAACT 3133535 36 100.0 37 .................................... CTTTTCTGTCATAACGCTCCCGCTGCTCGGATCACTC 3133462 36 100.0 36 .................................... AGCTTACCGCGGCACGAAAATGGCGACCGAAAATCT 3133390 36 100.0 37 .................................... ACAAGGAGATTTCCAATGTTTAACCCGTTTGAAAAAC 3133317 36 100.0 37 .................................... TATTTTGTCCTTGTCTTCAACCGTTTCCACCACGCCT 3133244 36 100.0 37 .................................... GAGGGTAATAAAATCGGCATCGCCGTCGCTGAACGAG 3133171 36 100.0 36 .................................... AACTGGCACAAACAGCGCGCGACATTATTCGGCGCC 3133099 36 100.0 35 .................................... TTGCTCCCGATGGCGTTAACGATACTGTTAACCGG 3133028 36 100.0 37 .................................... AAGCTCGATGTAGTGGGCTTCAAGGAGGAAGACCAAC 3132955 36 100.0 35 .................................... CAGCGCACCGCCACCGCGGCGCCGCCGGCGCTGCC 3132884 36 100.0 37 .................................... GCTTTGGTGTGTGAAAGCTTACCAAATGGAAAAAAAC 3132811 36 100.0 37 .................................... CAGGGCATGCAAGATCACAATGCGGAGTCGATCAAAT 3132738 36 100.0 36 .................................... ATCCCCTCCTGCGGCTGTAACGATCCGTTCTTCTCC 3132666 36 100.0 37 .................................... AGGCTTGTCCTGAGTTGAATGTATCGCCAACGACACT 3132593 36 100.0 36 .................................... TGTGTCAGGCCGCCGTTGTCGCAATCAGCGCATGAA 3132521 36 100.0 36 .................................... TTGACGCTTTTTTCAATCTCGACCAAACCTTGAAGG 3132449 36 100.0 36 .................................... AAACAGGCCGACGCGGTGATGAAACTGTTCAACACC 3132377 36 100.0 38 .................................... CGGTATTCACCCAAAACGTTACGTAACAGCTCAATCGC 3132303 36 100.0 36 .................................... CACCTGCAAGTCATCCGCGCCTACGACGACCTGATG 3132231 36 100.0 38 .................................... AGCAGCAGTCATCCGTCGTTTAGTCCGTTGTGGGCGCA 3132157 36 100.0 36 .................................... TTATCAATCGATAAGGCTGAGAATCAGGTTATTCAA 3132085 36 100.0 36 .................................... TTGCTGTCATGGCCGACAGTGTATCGGCCTAACGTG 3132013 36 100.0 35 .................................... AGCGAGGCATCGCCATGATAGACGTAGAAATAGAC 3131942 36 100.0 35 .................................... GATGTCTTCTGGGTGGAGTCCATCAGTCTCGTTAT 3131871 36 100.0 38 .................................... ATTGATCTTGAATTCACGCGCGACGCCGAAGAAGACCT 3131797 36 100.0 37 .................................... TGATGGTTATGTTGAGGTACATGCCCCCGATAACGCA 3131724 36 100.0 36 .................................... GAGCAGATTTCTAAGTTATCGTTTACAGAGTCAAAC 3131652 36 100.0 36 .................................... TCCATAGTAAAATTGAGTTCCTATTTTAATCATTAA 3131580 36 100.0 35 .................................... TCGCGCCGTTCACGCCGGATATGGCCGGTGTGAAA 3131509 36 100.0 36 .................................... GACCCAATGGTGGTTCTCCGTGATCTCTTAAATTTC 3131437 36 100.0 37 .................................... TAATAATACAGAACAATCTTGGAATTCGGTATCATAA 3131364 36 100.0 37 .................................... GGCATCCCCGCAAAAGATGTCGATCTGGCGCAAGCGG 3131291 36 100.0 36 .................................... GTTGCAGTTCTTCTAAATCAAGTAGTCCGGCCATTA 3131219 36 100.0 35 .................................... CCGCTGCAGCTTTGCGGGGCGGCGGTTGACCTCGC 3131148 36 100.0 37 .................................... CCCGATAAAACGGCTAGTTCATCATCGAACCCGCGAA 3131075 36 100.0 36 .................................... GCAATAAACCTTGACGGCACTGCACACAAACTGCAA 3131003 36 100.0 36 .................................... TAAGCGTAAGCGGGGACCCCATGCGTCAAGACTGCA 3130931 36 100.0 37 .................................... TATTTGGTGATGGAGTTGCCCGTTTAACCTTGTTTGA 3130858 36 100.0 36 .................................... GTGTAAACCTTCGTAAAACTTTTCGGGCGTTGATTC 3130786 36 100.0 37 .................................... GACCGTTTCCAGCGCAACCGCCCGTTATGCCGCGCCT 3130713 36 100.0 37 .................................... TTGCTAATCTCTTGGGGCAGATTGCCCCCTATATTCC 3130640 36 100.0 36 .................................... CAGCGCTGACAATTGCTCCAGCGTGCCGAGGAAATG 3130568 36 100.0 37 .................................... CAGGGGCGTCGCGAGTAAGGTCGGATCGCCATCTTTC 3130495 36 100.0 37 .................................... AAGTAACCGGTCTATTTCAGCTTTACATTCTCTAATA 3130422 36 100.0 37 .................................... CTATCGTTCCCATTTAAATATCAAAAAAGGTTGTGTC 3130349 36 100.0 35 .................................... TAGTGCTCATGCTTTCACAAGCTCAGATGCGCGTC 3130278 36 100.0 37 .................................... GGATACACGTTGCAAGGCTTGATACGTCGTCGGCGGC 3130205 36 100.0 38 .................................... AAAAGAGCTGGTTGCAACAAAGCCTAATGAAATTTGGT 3130131 36 100.0 35 .................................... CAAAGTTAGGTACTCACGCTTCCCATTTAGCGTAA 3130060 36 100.0 38 .................................... GCACGAACGGCCTTGACGGCTGCGACGGTCGTAAAGTA 3129986 36 100.0 36 .................................... GAGGGAACGAATGTCCTATCTTTAAAGGGTGGGATA 3129914 36 100.0 34 .................................... TCGTGCGCCGTGATCGTGAGTTCGAGGCTCATAC 3129844 36 100.0 37 .................................... TACAAAGAACAATTTGCCCTTTATCTTCGGAATATGC 3129771 36 100.0 36 .................................... GCGGCAGCAACAGTTGTAATTGCAGCGCTTATTGCA 3129699 36 100.0 36 .................................... CTGGATGGTTTGGGCGATTTCGGCGCGCCGATTGGC 3129627 36 100.0 37 .................................... CGAAGACTCGCTGGCGGGGTTTTAGCCGATGCTGACT 3129554 36 100.0 36 .................................... AAGCTGGTGCAGGACGGTTCGAACGATATGTTTGAC 3129482 36 100.0 36 .................................... ATCGGCCCGGCCTTGGCGCCGGCTGACAATTACAGC 3129410 36 100.0 35 .................................... ATAGGAAGTTTGAACTCATTCGGACGTGTTTGCCA 3129339 36 100.0 37 .................................... GCTACAACCTGGGCGTATCGATAATCGCGAACAAATT 3129266 36 100.0 37 .................................... ATTGGGATTAATGTCCATCCAGACCGGCGAGGCAACC 3129193 36 100.0 36 .................................... TAAGGGAGTCAACGCGCGTAAAGATGGTGGATATGT 3129121 36 100.0 36 .................................... TTGTAATGCGCGGATCGTGTTCACAGTATCCGCTTG 3129049 36 100.0 37 .................................... AAACAGCACTTGGACCGGGAGAAGGATCAGGAAGATA 3128976 36 100.0 37 .................................... GATGAACGACGTTGTTTCAGGTTCGACGACGCGCCTT 3128903 36 100.0 37 .................................... ACACAAAACAACTCAACGTTAGTCCAGTTTTCAAAGA 3128830 36 100.0 36 .................................... AACGATTTCGCGGTCGAAAACGGCAAAATCCTGGAG 3128758 36 100.0 37 .................................... ATCGTACCCTTCTACGACCTGGATTTTGCCCAGAGTC 3128685 36 100.0 37 .................................... ATAAAGACGGGGATTATACGTTTGGAAAGGGTAATGG 3128612 36 100.0 36 .................................... TTGAGCTTTTCCTCAGTCAATTCCAAGTAATCTTTG 3128540 36 100.0 36 .................................... GAACTTGATTTCACAAAACCAACTAAAATTTGCAAA 3128468 36 100.0 37 .................................... AATGCGTAATGCGCAAGAGCGCCGCTGTAAAGTGGCA 3128395 36 100.0 36 .................................... TTTGCCGCTGCCGCAGCCAGTGGCAATACGGTCCCC 3128323 36 100.0 36 .................................... GAGATACTCTTTGGGAAGCTATTGACAAACTAATGA 3128251 36 100.0 36 .................................... AGGCTGTACCGAATAAAGAATTGACATATCATTAAG 3128179 36 100.0 37 .................................... TATGGCTTTCTCGTTCAGCTCGATGCGGTATTCATCG 3128106 36 100.0 36 .................................... TATGAGTTCTGAATGCTGTAATACCGCAAGTTCGCA 3128034 36 100.0 36 .................................... GTCTAGGGTAATCATACTACCTTTCTTCTATCTTAT 3127962 36 100.0 37 .................................... TAGAGTCGAGAATGAACACGGGCGAAATGTCGGCCTG 3127889 36 100.0 37 .................................... GCAGCTTGTAAATCAAGAAGATAAAGGTTCACTTCCG 3127816 36 100.0 36 .................................... GTTGCGTTCTTCGTAGGTGCCACCTTCAGGTTTTGC 3127744 36 100.0 36 .................................... CGCTTGGACACGCGCATAACCGACCTCGGTCGCGGC 3127672 36 100.0 36 .................................... AATGTTCACGCCAGAGGCGATAAAGGTACAGCTCAT 3127600 36 100.0 36 .................................... TGGCGGGAATGGGCAGCTAAATTTTAACTCGTCCGA 3127528 36 100.0 37 .................................... ATAGTAACTCCAATAAGGCTGGTTGAAACAATCCATG 3127455 36 100.0 37 .................................... AGTATTGTTGAATATACCGGAGACCGCGTCCCACTAC 3127382 36 100.0 38 .................................... AGCATTTTCATTTCCTCTTAAAGTTGGAATTATAGATT 3127308 36 100.0 37 .................................... TATGTGGCAATAATTTTCTTTCTTCGATTGTTATGGT 3127235 36 100.0 37 .................................... TGGCGTTGTCCTGGGCGATTCCAGCGCCTCTATTACC 3127162 36 100.0 36 .................................... TAGTCAAGCGATGAAGACTATGGATAACATCAACTG 3127090 36 100.0 36 .................................... GGTAAGCAAATCGTAAATACCCTGATCAAACCAAGC 3127018 36 100.0 36 .................................... CTTATTGGATGCCCGAATGGCAGCATCCCGGCCCGC 3126946 36 100.0 36 .................................... CTTTGTTACTCCGGTCACTATTGCCGACTACCGAAA 3126874 36 100.0 38 .................................... CGTATGGCTGGATGGATACGGAATCCGATTGATTGCCG 3126800 36 100.0 37 .................................... TAGGTGCTTTTTTTGGCTAATTTTTACCATTTATCTT 3126727 36 100.0 36 .................................... ACATGGGCCGTCGGCGAATTCGAGTGCTATTGCTGG 3126655 36 100.0 36 .................................... TATCGAATCGGTATCAGTTAGCAGGCATTTTCCGCC 3126583 36 100.0 35 .................................... CCGATAGTTAGAGAGATCAACGGCGTTTTCGTGGA 3126512 36 100.0 36 .................................... AGGCGATTTGCGCGGTATGATTGCCGCGCAGTTCGT 3126440 36 100.0 36 .................................... AATGTAAACCATTGGATAATTTTCGTCGGTGCATCC 3126368 36 100.0 39 .................................... GCATCAAATTCCCCACATTTTTCTGGCGTCATAAATAGT 3126293 36 100.0 36 .................................... AGTTTCGCCGCCGTAAAAAAATACGTGGAAAAAATC 3126221 36 100.0 34 .................................... GCAAGGGCAGCCGGATGCCGTCTTCGCATTTTGC 3126151 36 100.0 36 .................................... CAAGGCTATGAGGCGGGCGTTATGATCGCTGACTAT 3126079 36 100.0 37 .................................... GTCCAGCCCGAATTAACTGGGCATTTTCAGAAACTGA 3126006 36 100.0 37 .................................... TCGCCTGCAGCAGTAATCTGCTGCATTGATGATTATC 3125933 36 100.0 37 .................................... AAGGATTAATGCTGCCAGCCAACGCTTGCACGGCGTC 3125860 36 100.0 36 .................................... GTGCGCCGCGTCGCTGGTAAATACCAGCCCTTTCTC 3125788 36 100.0 36 .................................... ATGCCGGCCAAGGCCGCGGCGAAGTCGCTCATCGTC 3125716 36 100.0 36 .................................... AACTCGGCCTCGGTCATCATCATCTGCCGCTTGCCC 3125644 36 100.0 36 .................................... GAGTTCGCGTTTGAGCCAAGCATCAATATCCCGCCG 3125572 36 100.0 36 .................................... GAGTTCGCGTTTGAGCCAAGCATCAATATCCCGCCG 3125500 36 100.0 36 .................................... ACAAAACCGGTGATAAATTTCAGTGCCGATTTAACC 3125428 36 100.0 36 .................................... ATAAGGCCTTGCATAACCCTCCCTGGCTGTACGGCA 3125356 36 100.0 37 .................................... GCATATAACTAAGCGGCCTGCCTGTTTGAGGATCAAG 3125283 36 100.0 38 .................................... CTCATGTGAGGCTGACCTATGCCTAGCACTCAGATTAC 3125209 36 100.0 36 .................................... TTGTGACGCGAATCAGATTGCTACCTGGACTCGGCA 3125137 36 100.0 35 .................................... CGGGCGTGGTGGTCGTCGAGTTTGACGCTCCCGAG 3125066 36 100.0 36 .................................... TCCAGGGTGGAGTAGTCATTGACCAGTTCCAGATAC 3124994 36 100.0 37 .................................... TAGGGGTAGATTTATGTTTAGATTTTTATTCGAGAAT 3124921 36 100.0 37 .................................... AGTGCCAGCATCGCGCCGCCTCTTCGCTGTGTTCTCC 3124848 36 100.0 35 .................................... ATCTTCAACCGTTGCCGACAATGCGAATAATTTGG 3124777 36 100.0 36 .................................... CACACACTCAGGGCTAGACTTAATGCGATAACGAAA 3124705 36 100.0 35 .................................... TCGGCAGCAGCCAGCTTCGAGTGGCGGAAGAAACG 3124634 36 100.0 37 .................................... ACAACAAGAAACTACCGGAAAAAGATCGCGTTCCGTT 3124561 36 100.0 36 .................................... ACGATGATTTTAGTGCCTTTACACTGGCCCAGCACG 3124489 36 100.0 37 .................................... GAGTCGATGACGAATACCGGCGAAATGTCGGCCTGCC 3124416 36 100.0 36 .................................... GATGCGCCAAATTGCCTACGTTATCGCTCAACGCCA 3124344 36 100.0 37 .................................... TATAGGTGGGTAATTTTCATCATTGCTTTAAGTCTAG 3124271 36 100.0 37 .................................... GCTGACTGACACGGATTCGATCAAATGTACGTTCGAC 3124198 36 100.0 38 .................................... ATTCTGGACATTCTTTTTTTTCTTCCTTCCTTGAAAAA 3124124 36 100.0 36 .................................... AAATGATGGTTGACCTTCAGCTTAGCCAATATCTAC 3124052 36 100.0 36 .................................... GATCGGAAACTGGGGATCAGGCACGGCCAATACGGC 3123980 36 100.0 36 .................................... GATCGGAAACTGGGGATCAGGCACGGCCAATACGGC 3123908 36 100.0 37 .................................... GGGCGGGGGGCTTGATCTGTCAAAACTGGCACCTATG 3123835 36 100.0 37 .................................... GGATCGAAAGCCACCTGCCCCTCGACAGGCTCTCCAT 3123762 36 100.0 36 .................................... GCTGGGTCCGTCAGTGGGCTTTGTCGAAGATGTGAT 3123690 36 100.0 35 .................................... AGCCGGTGAAGTGGAAATTGCCGTGATGGTAAGCT 3123619 36 97.2 36 ........C........................... TATTTCGACTCCTCGATTTCCTCGGCGACGTCTTCT 3123547 36 100.0 36 .................................... CCGCGATGAAAAATCGAACCTGCTATCATGGGCAGT 3123475 36 100.0 36 .................................... GGATATGCAGCCGTATACATTACAGGACGGCTCGAT 3123403 36 100.0 35 .................................... ATTACGGGCCGGGCTACCGCGTTTACTTTCAACAG 3123332 36 100.0 37 .................................... GTCGAAGAGTACTTGGTAGACTTGAATGCCACGCAAG 3123259 36 100.0 35 .................................... TTGCCCCGCGCCGCGATACCGACGCTCGCCTGATC 3123188 36 100.0 36 .................................... AAGCAGTTGCTCCCGTTTATAGGAACTGATGCCTCA 3123116 36 100.0 36 .................................... AAAATGATCGGTGTAGACGGCCGGGTCCGATTGCAG 3123044 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 147 36 100.0 36 GTTTTCCCTGGCCTCGTGCCGGGGCCTCATTGAAGC # Left flank : GCTTACGAATATCTGTATCTGGTCACTTACGATATCAGCGATCCGAAGCGCTGGCGGCGCGTGTTCAAGCTGATGAAAGGCTACGGCGACTGGCTGCAACTGTCGGTTTTTCAATGCCGTCTGAGCCGCAAGCGCCATGCCGAGTTGATCGCTCTGCTGGACGGCATCATTCATCATACCGAGGATCATGTTCTGATTATCAACGTGGGTCCCGCCGAATCGGTCAAGCCGCAAGTGGTCAGTTTGGGCAAAGAATTTGAAGTGCTGGAACGTCAGCCGGTGATTGTGTGACGCTATTTTTTTGCCGCCTCCGGGCGAGCGCTGCAGTGGCGCAAAAGTCAGCGGCAGCGCTCGCGAAGGATTGTTCTTTAAAAATCAGGTTATTACAAATGGGTATGGATTTGGAGTACGGGTTGTGTATAATTGCCGAGGCGCAGGTTAGGCCAGCGCTCGCATTTGACCGCGCCAAGCCTTGGTTTTCAAGGCTTGGCGCGCGGGCT # Right flank : GGTTATGAGTTGCGGCATCATAGGATGGCTAATTAGCTGTTTAGTCCCATACATAAATGGTGTAACCTATTCCCAACTGAAAGAGGAAAAGCGATGGGACAAGTACTCCACGGAACAGCCACGACCACGCACGCGATCCGAGAAAAAATTCAAGACGCTCAAGAGAGCCTCGTCAAACTCGCCAAGCGCTACGGGATCAACCCCAAAACTGTCCAGAAGTGGCGGAAGCGGGCGTCGGTCGAAGACCTCAAGTGCAGCAGCAAGCCCGGCCAAGGCAGCGTGCTGACCGCGGTGAACGAAGCCGTCATCGTCGAAACCCGGCTAAGACCTTGTTGCCCTTGGATGACCTGTACGATCTGTTACGGCCACAGATACCGGCGCTGACCCGCTCCAACCTGCACCGTTGCCTGCAACGCCACGGTAATCAACTTGGGCAAAGACAAGAGGTACCTGTTCGTCGCCATCGACCGTGCTACCCGCTACGTCTATCTGGAACTGCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCTGGCCTCGTGCCGGGGCCTCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-12.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA //