Array 1 1057411-1057786 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIVT01000001.1 Streptomyces sp. CB02366 scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================================================================================== ================== 1057411 29 100.0 32 ............................. TTGCCGCAGCACACGTTGTAGACGTCGGTCAC 1057472 29 100.0 32 ............................. ACCCAGTCCGGCAGCATCACCGTGGAGCAGGC 1057533 29 96.6 32 ............................C GTCGCCGCGGCGCCGGACAGCAGCGCCTCCCG 1057594 29 93.1 136 .........................C..C TTGGCCGAGCACACCGCCCCGGACACCCCGCAGGCACTCCCCGGCTCCCCCGACAACCCGCTTCCCGAGAAACACCTCAGCCCCGCACGCGCGGCGACAGCCCCGTGCAGCTCGGCGCGACGACGCGGCACCACCT 1057759 28 82.8 0 .........-....C.....AA......T | ========== ====== ====== ====== ============================= ======================================================================================================================================== ================== 5 29 94.5 58 GTGCTCCCCGCGCGTGCGGGGGTGGTCCG # Left flank : GCGTGGTGACTCCTGGGACGAACACGGGGACGGCCGACCGAGGGGCCCGGGAGGGAAGCACCGGGCGATGGCTGCGTGTTACCGGCAAGCCCTCGGCTGACGGTTGGCCGAAGTTGACGCCTTGAAGTCTGGCCGCGCCCCGGCCCCGAGGTCGTCCCCCGAGGAGCCGAACCGACAACTCCCCGAAAGTGCCACAGCCCGCCCGCCCGCACCCGCCGGAAGTGCTACCGACCGGCGTCCCCCTTCGGACCGAGCAGAGGGGGGGAGCGGTCGACGCGAGCACCGAAACAGACGTCCCCAACGGCCTTGGCCACGCCCGCTGCACGGGACCACGCGATGGGCGAACCGGGGTCCCGGCGGGTCCATCGGAAGGCAGAATGGGGTCTGTCGAGCCGCTCCCTTGAAGATGACCCCTTTGAAGGAGAAGAACCCACATGTCCCATTCTCAAGAAGTAAGCAAAAACAGCCTCGTCGCTTGATAGACCCGCAGGTCACGAAGG # Right flank : TGGGCGGGCAAGGTCCCCTCGGGCGGTCAGTCGCGTTCGTCGCGTACGCGGGCCCGTACGCGTGGTACCGGACTCGCCCCGCGTGGGTACTGCCCCTTGCCGGTCCCGATGACATCGGTCGGATCCCGCAGCCAGACCTGCTGGCCCCGGTCGGTCACGGTCAGCCCGAACTCCTCGGCGGTGGGCCGGCCCGCCGCCTCGTACTCCCACCAGGTCTGCTCGATCTCCTCCCACACCAGCCCGACCCCGTACTGCCACACCTCCTCCCCCGACGCGGTCGTCGCCCCGCCACCGTTCTCACGCGTCACCCACACCCGCACCCCGCCGTCAGGAAGCCCTTGGTGGACCATCCGGACACCGGGCAGCCGTGCCCCTGCGAACAACGCGAACCCGAGGTCCAACAAACGAGCCGGATCCAGACCCGCCGCACGCGCCCGCCCCTTCCCCCGCACCTCGTGGAGATCGGGCACACGGTGGGACCGCATCGACATGTACATGGC # Questionable array : NO Score: 2.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-2.92, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGTGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1063599-1063992 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIVT01000001.1 Streptomyces sp. CB02366 scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1063599 29 100.0 32 ............................. GCGTCGACCGACCGGCAGCAGCCCCGGGAGCC 1063660 29 100.0 32 ............................. AGGGTGCCGAGGGCCAGGCCGCCCTTGCGGAG 1063721 29 100.0 32 ............................. GGCGCGTCCGGCGACACCGAGACCACCGAGGA 1063782 29 100.0 32 ............................. AGGCTCCCGCTCAGGGGAAGGGGATGCAGACC 1063843 29 100.0 32 ............................. TGGTTCCGCCCCGTGGGCCCGCGCCTGGCCGG 1063904 29 89.7 32 ....C........A.A............. GGGTTCAGCAAGGCGTCCTCGACGCCGACGAA 1063965 28 75.9 0 ...........-.C...CC.CT..T.... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 95.1 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : AATGCCGCCCTACTTCCCCATCGCAGAACCCACCCCAACCAACGCCTCGGCCCCCGCACCAGCCCGCCGCATCCTCATCGAATGCACCCACTGCGGACGCCCCGGCCGTCCGGAAGCGCTCCCGGACGGCCTCTGCCGCCCCTGCCACCACAACCACACTCATGGCAGCGACACCACCACACCCACCCCCACCGAAATCGCCGCCGTCAAAGCCCACATGGCCAACCTCCGCACCCTCCTCAAACCTGTGTGACCCCGCCCCCGGGGCCTCACCCAGGGGCAGGCCAGGGGCCCCACAGCTCACACCCAGGACCACGCCTACGGGGCGCGGAGTCCCGCCCCTTACGTCGAAGCCGGACCGACCAGGCTGACCAAGAGGCAGAATGACATCGACCGAACCACACGCTTGACCGTTTCGCGCCAGAGGGCCAGATATGCCGATTTCTCAAGAAGTAAGTAAAAACCGCCACCCCGCCACCTAAACCCGCAGGTCACGAACT # Right flank : CCTCTCCGGGCTCACCGCGCTCGTCCGCCCGGGTGGTAACGTCCGGCGCCCTGCCCCCGCGCGACCGCCTGGGGGAAGCCGGACAGCGCGAGAACGAAGTGAGCGGTGACCGGTGACGGGGACAGGGCGGCCGGGGTCGGTGGGGGCCGCCTCGGGGGGTGGTCCGTCTCCGAGCGGCGAACGCGTTGAAGGGGAGCAGCACATGGGGCAGCTGACGGTGGTCAACTTCGTGTCGCTCGACGGCGTCATGCAGTCGGTCCTCTCCGCCGACGAGGACCGGGAGGGCGGTTTCGACCAAGGCGGCTGGGTGCTGCCCTACGTCGACGCGATGGTCGAACGGTTCATGAGCGACGCCACCACCGGCGCCGGAGCCCTGCTCCTGGGGCGCAGGACGTACGAGATCTTCGCCGCCACCTGGCCCTACGCCGACCGGAGCGACCCGGCGGTGGCCGCGATGAACGCGATGCCCAAGTACGTTGCTTCCCGCACGCTGGGGAACG # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1125209-1124447 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIVT01000001.1 Streptomyces sp. CB02366 scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1125208 30 96.7 31 .............................T CGCAGAGCTGTACGGCGTGACGTACAAGACG 1125147 30 100.0 31 .............................. ACGACATGGCGGTCCGCCTCGCCCGGTATGG 1125086 30 96.7 31 .............................T CGGCGGTCGCCGCCGCGTCGGGCTTGGCGGG 1125025 30 100.0 31 .............................. TGCGACGGGGCCCCGCCAGCGGGCCAGAAGC 1124964 30 100.0 31 .............................. CGGCGTAGGTCGCGGCCGCGAGCTTGGCCGC 1124903 30 96.7 31 .............................T GACGGTGTCGGCGTGGTCCATCCCCTTGACT 1124842 30 93.3 31 ............................TC CGAGGGCGGTGGCGCTTGCCGCCGTGAGGAG 1124781 30 100.0 31 .............................. TCCATGGCGGCCTCTACCTGGGGAAGACCTC 1124720 30 96.7 31 .............................C TCGACATCCAGTGGGCCGACAAGCAGGGCGA 1124659 30 100.0 31 .............................. CTCGATCTCTTCGAGCGCCCGGCCGATCGCG 1124598 30 100.0 31 .............................. ACTCCTACTTTCCCCGCGCGCTCGTCAAGGA 1124537 30 96.7 31 .................A............ GATCCATCTCTTCGGACCGTGCCACTGAAGT 1124476 30 90.0 0 ..........T...T..............A | ========== ====== ====== ====== ============================== =============================== ================== 13 30 97.4 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : CATCCGCCGCCGCCTCACCGACAAGATCCCGCCCCAACTCCCCACGCCAGAAACCGCCCGACCAGGGCCCGGCACCCCAGCGCCCGCCCGTCGCATCCTCATCGAATGCACCAACTGCGGCCGCCCCGGCCACCCCGAAGCCCTACCGGACGGCCTCTGTCGCCCCTGCCGCCACGCCCATGCCCATGCCCACGGCGACACCGCCACGCCCGCCCCCGCCGAAGTCGCCACCGTGAAAGCGCGTATGGCCAACCTCCGCACCCTCCTCAAGCCCGTCTGAATCCCGACCGGCAGGGTCGGCCCGCTACCCAGAACCACTCCGCAGGGCGCGGAGCCCCGCCTCTTGCGCTGAAGTCGTCCCGACGCGACCGGCAGCAGGCAGAATGACACCACCCGCACCCCAGACATGACCGTTTCGTAATCAAAGGTGAGGCATGCCGGTTTCTCAAGAAGTAAGCAAAAACCGCTACCCAGCCGCCTAAACCCGCAGGTCACGAACT # Right flank : AGCACCTGCGGGAACGATGGCACCGAGATGGGTGGTCCCCGCGCACGCACCTTCTGCTTCATCCTTGACCAGCTGGCAGGCGTCGACCTCGACACCCTGACCATCCGGCCCCTCGGTCGGCTCGCGTGGTCGGACCCGGCTGCGAGACCTCGTCGCGCGCCCGCGTGACGGTTTCCACGGACGGTCGGTGGCGAGAGCCGTTTCTCATCGCTCGTGCAACCGGTACCTCATGGATTCAGGTTTGACAACATAGTGGTCCCCCCTTTCCGACCGGGGCCAATGCCCCGACGGCGGGTGGGGTTGAGGCCCGGGCGGTTCGGGGGTGCACCGGATGGTCCGGGGTGCCCGCACGCGGCGAGAGTGGGGCCCATGAACACGCGCACATTCCTGCTCAGCGCCCTGCTCGTCCCGCTCGGTGCCACCCTGGCCGTCTCTCCGGTCGCCTCAGCCACCACGCCTCCCGCCACGTCCACCGCCTCGGCTGCCGCCGCGCTCGCCGG # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 1136749-1136229 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIVT01000001.1 Streptomyces sp. CB02366 scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1136748 30 96.7 31 .............................T CGACGGATGGGTGCAGCAGGGGCGCTTGGAG 1136687 30 96.7 31 .............................A CCGTCGGCGCCTCTCGCTTCCAGGCCCGGGT 1136626 30 100.0 31 .............................. ACTCACCACCCCTCAGAGGACAAGGCCATGA 1136565 30 96.7 31 .............................A GGGTCGGGTGGTTGCTCATGCCGCCACCTCG 1136504 30 100.0 31 .............................. ACGAAGGAACCGAAGATGCGCCCTAATCTTG 1136443 30 93.3 31 ............................TT GGGCAAGAACGATCTTGGTCCGGTCACGCGG 1136382 30 90.0 31 ..............TA.............G CACCGGATGGAGCGCCGACGAGATCGGCGAA 1136321 30 93.3 31 ......................G......T CGACCCGGATCACCTGGTCCAGCGTCGAGTC GC [1136296] 1136258 30 86.7 0 A.................A......C...T | ========== ====== ====== ====== ============================== =============================== ================== 9 30 94.8 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Left flank : CTCCGGCGTCCAACTCGTAGCGTCCAGGGGCCGTAGAACCCCGAGAAGCCGTCCGCGCCGGACCGTTTCCGCGCCCGTGCCTCAAGTCCGCGCACGGGCGCTCTCCGCACAAGGACTTCGCGGTGGCTGTGGAACGGGCATGGACCACGGCCCACCCCGGTGGCCTCCTCGTTGGGGGGGGTGACTTCACCCCGCTGCCCGAGGGGCCGCCCGTTTCGATGGCGAGGTGGATGAACTGCGCATGCCCCGCCTGACGCATCCGGCCCTTGACGGCACGGAAGCGCCCACGAATCCGGCCGGTACCGTGGTGATCGGGGCGCGTCGCGCCTTACGGTGAGCTGGAACCGGGTTGCACGGGCAGACCTGGGCCCCGCCCGCTGACCGTTCGCGCTCAGGGGGAGCGGCGATGCCGTGGAATGTGAAAAAGGTGAAGTATGCCGGTTTCTCAAGAAGTAAGTAAAAACCGCTACCCCGCCACCTAAACCCGCAGGTCACGAACT # Right flank : GGGGCATCGTCTTAGGCCAGACCGGCAAATTAGCAGCAGTTCAACCAAGGACCACCCGTTCGTAAGCCCCGACCTTGGCGGCTGCGCGGGACGAGCGGCGCAGAACCCACCAAACCGTCACCAGAAGGCCGAACGGTCGATCACTATTCCCCTGCCGGGTTCTAGGGCGTGTTTCGAAAGTCCCGCCTGTTCGGCGACGCCCGGCACGCACGCTCGCCGCGTTGTCGGGACCACCCCGATACAACCGGTATCGGGGCGGCCCTCCGCCTTGCGATCGCACGCACCGGACGCCGCCGAGCCCGCCCTCCGGGCGGACGGCGCTACTTTCGAAACACGCCCTAACACCGGAATGACGAAAGCCCGGCAGCGTACTGCCGGGCTTTCGAGATCACCGGGCGCAGGGTCAGCGGCGAGCGGTCACCAGGAGCGTCCCGATGTGCCCGACATCCGGAGCCTCCACGACCCGGGCGTCAACGTCGCGGAAGCCGGCCCGCTCGAGA # Questionable array : NO Score: 5.41 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 1201823-1202950 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIVT01000001.1 Streptomyces sp. CB02366 scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1201823 30 100.0 31 .............................. CACCGCACCGCCGCGCCGGATGGATATCACC 1201884 30 100.0 31 .............................. CGGCCCTTGAGCGGATGTTCGGCGGCACGCA 1201945 30 93.3 31 ............................TC TCGGCGTTGCGCTTGCGGGCCTTGCGCCAGC 1202006 30 96.7 31 .............................C GGTAGAGGGTGCCGACGTCGAGCTGCTCCAC 1202067 30 100.0 31 .............................. CCGCGCGCGACGTCGGCGCACCTCTGGCACT 1202128 30 96.7 31 .............................C GACCTCACCCGGGACCGGTACGGCTACGTCA 1202189 30 96.7 31 ............................T. CTCGTCGACGAGCGCCTGGCCGTCATCGACC 1202250 30 96.7 31 .............................C GGTTGCGCACCGGGTTGCCGAACCGGTTGTG 1202311 30 100.0 31 .............................. GCTTGACGTGCCCCTTCAGGGCGGGCGCCCG 1202372 30 96.7 31 .............................A AGAAGCTCGCAACTGTCCTCCCGGCCGTCGC 1202433 30 96.7 31 .............................T TGCTCGTCTTGCCATCCGCCTGCGGCGGAAC 1202494 30 96.7 31 .............................C TCGGCGCCCGCGAACTGCGCAAGAAGGACGG 1202555 30 96.7 31 .............................A TCCGGCGTTGCGATCACCGGGCCCTGGACGG 1202616 30 96.7 31 ............................T. GCCGGTGAGCCCTGTGGCCCGCTACCGGGGA 1202677 30 100.0 31 .............................. CCGAGACCCCCCGTCGCGGTGACGGGGGGCC 1202738 30 96.7 31 .............................T CCTCCAGGGCGCGGGCGAACAACTCCCGCGC 1202799 30 96.7 31 .............................T GGGGCAGCCCGCGCTCATCGACGGTGAGCGG 1202860 30 100.0 31 .............................. AGGCGTCACAGTAGGCACAGCTCCACCACTC 1202921 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =============================== ================== 19 30 97.7 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : GGGCATGTTCGCCTGATCCGACCCCAGGCCGCGCAGACTTGGAACGAGTGCGCCCGCTCAGCCGTCCGGCCCGAGCCGGCTCCTGCGGTCAGCGAGGACGGCGTCACCGGGTTCCTCGTCTCGCTCGACCGCATCATCCTGCAACCCGCCTGTCCCCTCAGCACACCTTCCGGAGACGCGTGCCCCACCCGTACGCCCTACCGCCCGCCTGGGCCGCAACGACAACCGTCTCGTCCTCTCCACCGACGACTGCGCCACCCACGAACCCCTCGGAAGCGCGCGGCCCGCTCGCGGCGTGCGCACCGACTGGAACCACGTCCCCCGAGAGGCAGAACCCCGCCTCTTACGCCGAAGCCGGACCGACCAAACTGCCAGCGGGCAGAATGACACCGACTGCACCATGCTCTTGACCGCTTCGTAACGGAAGACCAGATATGCCGGTTTCTCAAGAAGTAAGTAAAAACCGCCACCCCGCCCCCTAAACCCGCAGGTCACGAACT # Right flank : GGGTTGGGAAGCGCGCAGGGTTTAAGGGCGTTAAGCGATGGGCTGAGTTGTGCAGGGGGTTGAGCGACCGTGGGCACCAGCGGGCCGAACACAACGTTAGAACGTCTGTTCCGCGAGACCGGCTGGACGCTGCGGCAGTGCGCGCAAGCGATCAACAGGGTGGGAACCGAGCGCGGCACCCCCAAGCAGTACCGCGCGCCCTCGGTGCATCAATGGATGAGCGGGAGTCTTCCGCGCGACGATGCCCGCTCGCTGATCTTGGAAGCGTTCGCCCGACGGCTCGGGCGCCCCGTCACACACGCGGAAGCCGGCTTTCCGCACCCTGCCGAGGCAAAGGGGGCGGAGGTCAGCACAGTTGACGGGATCATCGATCTTGGGAGGCTGGACATGGACCCTTCCCGCCGTGGCGTACTGGGCGTCGCCCTGTTCTCCGTCGCGTTGACCGTCCCCGAGTGGCCGGACGTGGTCGGGCGCATCGAAGCCGCCCAAAACGGCGCGCG # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.55, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 1208934-1209758 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIVT01000001.1 Streptomyces sp. CB02366 scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 1208934 30 96.7 31 .............................T TGCTGCGGGTGTAGCCGGTGCGGTCCTCCTC 1208995 30 96.7 31 .............................G TGCTGCTGCTCCTGGTCGTGGCCGTCGTCCT 1209056 30 96.7 31 .............................T GCCGCAGATTGGGGCATGAGGTGACGGACCG 1209117 30 93.3 31 .........A...................T GGTCTCGGCTGCGGTCGGCATGTGGACCCGC 1209178 30 100.0 31 .............................. TGGCGGGGGCCTGGTCGAAGCTCGAAGCGGC 1209239 30 100.0 32 .............................. GGCCGCTGCTCCACCACCGGGAGACCTGCTCC 1209301 30 93.3 31 ............................TT TTCTCAGGTGGGCGCGGGGCTGAGGTTCTGC 1209362 30 100.0 32 .............................. ATGAAGCGCCTCACCGGTGGTGACCCCATCGA 1209424 30 96.7 31 .............................T GATGACGGCCCCGGCGGCGTACCACCGCCCC 1209485 30 100.0 31 .............................. AAGCCGCGAGGTCGCGTCGGAGCCGATGTTC 1209546 30 100.0 31 .............................. GGGACCGCGTCCTGGCGGCCGTCGCCGCCGG 1209607 30 96.7 31 .............................T CGATAAGTTTCGCGGAGATGACCGGGACGAG 1209668 30 96.7 31 .............................G GGTCGAGGAGCGCGGGCGGCTGCTCCTCGGC 1209729 30 86.7 0 ..........................GAGG | ========== ====== ====== ====== ============================== ================================ ================== 14 30 96.7 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Left flank : GGACATGTTCGCCTGATCCGACCCCAGGCCGCGCAGACTTGGAACGAGTGCGCCCGCTCAGCCGTCCGGCCCGAGCCGGCTCCTGCGGTCAGCGAGGACGGCGTCACCGGGTTCCTCGTCTCGCTCGACCGCATCATCCTGCAACCCGCCTGTCCCCTCAGCACACCTTCCGGAGACGCGTGCCCCACCCGTACGCCCTACCGCCCGCCTGGGCCGCAACGACAACCGTCTCGTCCTCTCCACCGACGACTGCGCCACCCACGAACCCCTCGGAAGCGCGCGGCCCGCTCGCGGCGTGCGCACCGACTGGAACCACGTCCCCCGAGAGGCAGAACCCCGCCTCTTACGCCGAAGCCGGACCGACCAAACTGCCAGCGGGCAGAATGACACCGACTGCACCATGCTCTTGACCGCTTCGTAACGGAAGACCAGATATGCCGGTTTCTCAAGAAGTAAGTAAAAACCGCCACCCCGCCCCCTAAACCCGCAGGTCACGAACT # Right flank : GACGGCGTCACCGAGGTCCGCGCATCGCTTGATCGCATCATCCTGCAACCCGTCTGACCCCTCAGCACACCTTCTGGAGACAGCATGCCCCACCCATACGTCCTGCTGTCCGCAGCCGTCTCGATCGACGGCCACCTCGACACCCGTCCTGGGGAGGCCCGGCTCCTGCTCTCCAACAAAGAGGACTTCGACCGGGTCGACTCCGTACGAGCCGGTGTCGACGCCATCCTCGTGGGAGCCGGAACTCTCCGTGCCGATAACCCCCGCCTCCTCGTCAACTCTGAGAAGCGCAGGGCCGCCCGGATCGCAGCCGGTAAGCCGGAGTACCCCCTCAAGGTCACCATCACCGGCACTGGCGATCTTGACCCCGACTGGAAGTTCTGGCATCACGGCGGGGGCAAGCTCGTGCTGGCCGTCGGCGACACGGCCGCGACGAAGGCCCGCTCGAACCTCGGCAATCTCGCCTCCGTTCAGAGCATCCCTGCCGAGAACACGTGGCC # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 7 1212851-1213732 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIVT01000001.1 Streptomyces sp. CB02366 scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1212851 29 100.0 32 ............................. CTGTACCGCAACCTGGTCAAGTTCCAGCAGGA 1212912 29 100.0 32 ............................. GACCGCGACCGCAGCCGGCCCTTTCGGCTCCC 1212973 29 100.0 32 ............................. CATTTGGGTCGCGAGCTGCACTTGATTCTGGG 1213034 29 100.0 32 ............................. TCTGTCAACCCTTTCCCTAGGTTGTCCGGGGT 1213095 29 96.6 32 ............................T CAAAGAGATGGCCTTGCCATCGCAGTGATGGC 1213156 29 96.6 32 ............................T GGAGCAGCTCCCCACCACCCGCGCCGTACAGG 1213217 29 100.0 32 ............................. AGGGCGCGGATCTCGTCGTCGCTGAGGTCGTC 1213278 29 100.0 32 ............................. CGCCCGAACTTGGTCCCGGCCGGGGTGGTCTT 1213339 29 100.0 32 ............................. CCCTCGAACCAGGTTTACGGCGTCGCCCCGGC 1213400 29 100.0 32 ............................. CGGCCGGGCCCCTTACCCGGCTCGGCCCACTC 1213461 29 100.0 32 ............................. TTTGGTACTCAAGTTTTCCGGGGTTGCCACGC 1213522 29 100.0 32 ............................. GTTTCTGGTAACGGGAGTTCCGGGGCACCGTT 1213583 29 93.1 33 .....................A......A GCCTCCCGCCGAGCCGCGGTCCAGGCGGAGGCT 1213645 28 86.2 31 .G......T.............-.....T GGTCATTCCTCCTCACGCTCGCCATGCGCGG 1213704 29 82.8 0 .............AC......TC..C... | ========== ====== ====== ====== ============================= ================================= ================== 15 29 97.0 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : AATCCCACCCCAACTCCCTACGGCGGGAACCATGTCACCGGCCTCCAAAGCCCCCGCACCCGCCCGCCGCATCCTCATCGAATGCACGACATGCGGCCGCCCCGGCCCGGCGGAAGCGCTCCCGGACGGCCTCTGCCGCCCCTGCCACCACACCCACACCGGGACCAGCGAAAGCATTCCCGCCCCCGCCGAAATCACCGCCGTCAAAGCCCACATGGCCAACCTCCGCACCCTCCTCAAGCCCGTGTGACTCGCAACCAGCAGACCAACCCATCCGCCGCACCCTGGGGGCAGGGAAGGCGCCCACAACCCACCTCCAGGACCACGCTTAAGGGGTGCGGAGCCCCGCTTCTTACGCCGAAGCCAGACCGACAGCAGGCAGAATGACACCGGCTGCATCGCACTCGTGACCGTTCCGCAACAAAGGGGCAGCTATGTCGGTTTCTCAAGAAGTAAGTAAAAACCGCCTCCCCGCCGCCTAAACCCGCAGGTCACGAACT # Right flank : CAACACGGACTCCCGACCCGGCCCGCCCGTCCCCCACCCAGCGGACTACGCCGCAGGTACCGGTACGCCCCCGCCCCCGGCCCGATACGCCCGCCCACACCCCCAACTAGCGTCACCCGCATGCGAATCGGACTGCTCGGCACCGGAAATGTCGCCCGCACCCTGGCCCACCGCTGGCGCGCCGCAGGGCACGACGTCCTCCTCGGATCGCGCCGTCCACGGGAGCGGGGCGGCCTCGGTCTGGCGGTCGCGGGGCTGGACGAGACCGCCGCCCACGCGGAAGTCCTCGTCAACGCCACCCCCGGCGGCGTCTCTCTGGACCTGCTCCGCTCCATCGGGGCGCCCGCGCTGGCCGGCACGCTGCTGATCGATGTCGGGGTCGGCCTCTCTGACGACTTCAGCACCCTCACCCATCCCAACAACAGCCTGGGCGAACTGATCCAGGAGGCATTCCCGCTCACCCCCGTCGTCAAGACGCTCTGCACCATGGACGCGACCAC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 805830-806222 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIVT01000003.1 Streptomyces sp. CB02366 scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 805830 29 100.0 32 ............................. ATCACGCTGTGAAGTTCTCAAGTAGTCGAACG 805891 29 96.6 32 ............................T CGCTGACGGCACGTACGCCCCTGGGGATCCGC 805952 29 96.6 32 ............................T GCCGATCTCCTCAAGACGTCGGCAGCGCTCTG 806013 29 100.0 32 ............................. CCCTGCGCCTGCTGCTCCAGCCCCGTGCCCCA 806074 29 100.0 32 ............................. GCCCCCGCGCACGGCCTGACCCTGGGAGTGTC 806135 29 100.0 29 ............................. ATCCGCGCGCACCCCACCGCCGATCCCGT 806193 29 79.3 0 AG..A.........G......A......G | T [806215] ========== ====== ====== ====== ============================= ================================ ================== 7 29 96.1 32 GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : CGGGGGCCACGCCGCCCGCCTCCGACACCCCCGCGCCCGCCCGCCGCATCCTCATCGAATGCACAACATGCGGCCGCCCAGGCCCCCCAGAGGCACTGCCGGACGGCCTCTGCCGCCTCTGCCACCAAACCCATGCCGGGGGCGGCAGCGGCAGCGGCAGCGGCACACCCTCCTCCGCCGAAATCGCCGTCGTCAAAGCCCACATGGCAAACCTCCGCGCCCTCCTCAAACCCGTCTGACCCCGACCCAGCACGCAAACCCGCCGCATCACCTCTGAGAGCCAGGGCGGGCGCACCACAACCCACGCACAGGACCACGCCCACAGAAGGCGGAGCCCAGCCCCTTGCACCGAAGCCGAACCGACCAGACTGGCAGCAGGCAGAATGAAACCGACCGCACCACACGCGTGACCGCTTCGCGAAGTAAGGTCGGATATGTCGGCTTCTCGAGAAGTAAGTAAAAACCGCCACCCCGCCACCTAAACCCGCAGGTCACGAACT # Right flank : GCCTCAGTGTTCGCACGGCGCCCTCGGAGTACCCGATCCCCACACAAAAAGCATGGCAAGTGCTCTCCATCGGTGCCAGGTTGATCAATTAAGTGCACTTGCATTCATCCTCGGGCATCTGGCCCCCTCGCGACCGCGCCGATGTCCAATACGGCCATGAGCCGCGATCTTCCGGAAAGCCACTCGGCCTTCGCCTGTCTGTCCGACGCCTCCCGCACCGCCTGGGGTAAGCACGACCGGCCGACCGATCAGTGGCTTCCGCTCTGGCGGCACATGGCGGACAGCGCAGCCGTCGCCGGACGGCTCTGGGACACGTGGGTGCCCGACAGCGTCAAGGCTCTCGTCGCGGACGCGTTCCCCCAGGGGGCCTCGGACGCCAGGCAGGCCGCCGTCTTCCTCGCCTGCGTTCACGACATCGGCAAGGCCACCCCCGCCTTCGCCTGCCAGGTGGACGGGCTCGCGGATCAGATGCGGGACGCCAGGCTGGAGATGCCGTACCA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //