Array 1 83451-81253 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXB01000014.1 Bacteroides heparinolyticus strain DSM 23917 Ga0310509_114, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 83450 47 76.6 30 AAGACAG...TT.C...G............................. TATTAAGGTATCTTTTGACTCTACCAGATA 83373 47 100.0 29 ............................................... TTGTGGCGGGAAACAATACTCAAGGAGTA 83297 47 100.0 30 ............................................... TCTCTTAACGAAACAAAACTGGATTGAGTA 83220 47 100.0 29 ............................................... GTCTTTTCCATGACCTTTTATCGACAATT 83144 47 100.0 30 ............................................... TATAATAGGCATCAGTTTATCCGCGTAGGT 83067 47 100.0 30 ............................................... TATTAAGCAGTCTTTTGACATTACGAAGTA 82990 47 100.0 30 ............................................... AACAGTCAAACAATGGGGAGGCGACCGAAG 82913 47 100.0 30 ............................................... TAACAGTCAAACAACGGGGCGCGACCGAGA 82836 47 100.0 30 ............................................... GGATAAGCCCTGGATAAGAGAGGCGTGGGA 82759 47 100.0 30 ............................................... TAAAAAAAACTCGCTGCTGGCGGCTATTAT 82682 47 100.0 30 ............................................... AAAGTAATTACGTGGAGAGCCATACCGTGT 82605 47 100.0 30 ............................................... CGTCAACGTGTGGTCGCGTGACCAGTGGGA 82528 47 100.0 29 ............................................... GCCAAGGTCATTACAATCGTATGCGAGGT 82452 47 100.0 30 ............................................... CCATGCAGAACTGGTTGGAAGCGGTATTAT 82375 47 100.0 30 ............................................... TTCCTAATAAATCGGATGCCGTTCGTATGT 82298 47 100.0 30 ............................................... TCACACCAGTAAGCCGCACTATCCTGCCCT 82221 47 100.0 30 ............................................... CGATACCACGGAATGAGAGCAGGAACGCTT 82144 47 100.0 30 ............................................... ATCGGTTAGCCGGTAACGCTCTATGCGCGT 82067 47 100.0 30 ............................................... CTTTTCGCGCACGTAGATGCTATCGCGTAT 81990 47 100.0 30 ............................................... GGTGACGCGCGGAACCAGCACCAAGGCGTT 81913 47 100.0 30 ............................................... TGCCTTTAGGGTGTTGAACTCCTTAAAGGT 81836 47 100.0 29 ............................................... ACAATATAAGAAATAACAACAGGATATTC 81760 47 100.0 29 ............................................... ACGCTGAAAAGTGGATCCGTCATTATATA 81684 47 100.0 29 ............................................... GTAATGCATCACGGATGGAGGAAACAAGA 81608 47 100.0 30 ............................................... AGAAACCGACTATCTGTCAATGGCTATGCA 81531 47 100.0 30 ............................................... GCAGCATTTTCATCAAATATCACAAAGTTA 81454 47 100.0 31 ............................................... GCCATCCTTGCATATAGCGAACGGCATTGGA 81376 47 100.0 30 ............................................... TCAGACATTAAGAATTCCTTTATATCAGTA 81299 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 29 47 99.2 30 GTTGTGATTTACTTTCAAATTAGTATCTTTGAACCATTGGGAACATC # Left flank : AATATGCTCCGCTACGGGCATCTTCTTCATCGCATCAGCGATCAAGATACCAACGACCAGACCAAAGCCGTCAACTTCCTGCTGGCACAGGGCAAACAGCGCATCGCCATTGTAGGCGCCACGGGCAAACGCGAAGACCACACGCTGGGAAACATCAGCCTGCTTATCGACTATATGCGTGTGGGCGCCGATGTATGCACCTATACCGACTACAGCGCCATCATCCCCTGCCGGGACGCCTGCTCCTTTCCCTGCCGACCGGGACAACAAGTTTCCATCATCAACTTCACTGCCTGCAACCTGCATGCCGAGAGGCTGGTCTATCCTCTCAGTGACTTCACCAACTGGTGGCAGGGCACACTCAACGAGTGCACCGGCATCGAATTCACCATTGAAGCAAAGGGAGAGTATCTGGTGATAATCAATTATTAGTTAGAGATTAGATTTAGACATAAGAATAAAACATTGGCATTAGCCTGTCATTGACGAAAATCTGTTCA # Right flank : ATAATCCTCATAACACATTACTTTCCAATGAGTTAAAAAACAACCAGAGAAAGAAAAAAGAAGAGTGTTTCCAGCCCAAAATCTCGCATCAATGCGAGATTTTATTTTCTAAAACAACTCTAATTGCTGTCCAGGTGTATTGACATTCTGCACCTTTTTTCCATAAAAAAGTTCTATATCTCCAAATTGTTTGTCTGTAATACACATGATTCCAACATGCCCAAATTCCGGGAGAAAAGATTTAACTCTTTTTATATGTACTGCCGCATTCTCGCTACTGGCACAATGGCGCACGTAAATGGAAAACTGGAACATCGTAAAACCGTCCTTTTGCAGATTCTTTCTGAAATCCGCATAAGCTTTCTTTTCTTTCTTCGTCTCAGTTGGCAAATCAAAAAGAACAAGCACCCACATAATACGATATTCACTAAAGCGATCCATAATCTATCGTTCGGGATAAGCAACTCTACGAAGCTCTCCATTGAAACATTTATAAAGCG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTACTTTCAAATTAGTATCTTTGAACCATTGGGAACATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.20,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 37252-38055 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXB01000022.1 Bacteroides heparinolyticus strain DSM 23917 Ga0310509_122, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================== ================== 37252 35 100.0 35 ................................... TCAATTTTTGTTTTCATAAACTATTCTCTTTAAGA 37322 35 100.0 34 ................................... GATTTGTTCCCCTTTCCAATTATACACACCTGCT 37391 35 100.0 31 ................................... TTCCTCACCATATTCCACTTCCTCGTAGAAC 37457 35 100.0 38 ................................... TTTCCTGCCGTTTCTTTGTGAATTGGGTCACATTACAT 37530 35 100.0 35 ................................... GATAAAGGCTAATCTGCCCTCATACCATTTATCAG 37600 35 100.0 37 ................................... CTCGTAGAATCCAGAGAACGTGTCCGCCTTTTTAATA 37672 35 100.0 35 ................................... CCAATTTCCCGTTAATATTAACGGTCTTTTCTTCT 37742 35 100.0 33 ................................... CTTTTTATCTCTTTTTCACTTAAACCCTTAAAT 37810 35 100.0 36 ................................... ACATAGCTTTACACAAGTTTAATTACACAAACGACT 37881 35 100.0 36 ................................... ATTGCCCTCACTATCAACATTAAACGCTTTCTCGAG 37952 35 100.0 34 ................................... AACTCAAAGTAGAGGAAGTCAAGTTTCCGTTCTA 38021 35 97.1 0 ..................................T | ========== ====== ====== ====== =================================== ====================================== ================== 12 35 99.8 35 ATACAGTCTACTTCCATCACAACAAGGATTAAGAC # Left flank : AGTCTACCAGCCCGATCGTCGTCATCCTCCTGAAACGGTGCGGATGGTATAGAAGGGAGGAGAAATCATTTGCGAAAATTCAGAAGATGCGTAATAGGTTGATAATAAGAGTAAAGCTGTTTTTCCGATGAAAGGACATCTACGCAAACCATTCGCAAATCCCCACTTGATGCCAAAAGACCACCGCCTTTTGCGAAAATTCCTGTAGGTCTGTTTGCAATCTGTTTATAATCAGAGGTATATGCGGACCTAAAAGCGACGATTTTCGCAAATCCATGATGAATGCAAATGGCTCGTTCTATTTGCGAAGTTTTTTTAGTCGCAATCTATTGATTATCAATGGAAGTATAAAAACGTATGGCAAAATCCCCTTTTTTTGTATTCAAAAAAACAGTACTTTTGCGAAGATTTTAGAAGAAATAGCGTAAAACGATAAAATACAATGATTTATATCCATAGCTTATTGCAAAGAGTTACAGCAACATATTGATAGTCAGAAT # Right flank : TGGATGCATATCCTACAGAAGAAGAACGTCAAATGGGCAACCGCCGTAACGGTAAGATGCAGAAACAGGTGCAGACTCCATTGGGTGAGGTAACCGTATCCACTCCCCGTGACCGTAATTCAAGTTTTGATCCACAATTTATTAAGAAGCGTGAGACCATTCCGGCAGAAGGTGTTGCTGACCGTATAATCGGCCTGTATGTTCTTGGTAACAGCACACGTGAGATTAGTGATTGGATGGAAGAGAATCTTGGTAATCGTGTATCGGCAGATACAATCAGTGCCATTACGGACCGTGTACTTCCGGAAATAAAGGCATGGAAATCACGTATGCTTGATTCCGTCTATCCTATAGTCTGGATGGATGCCATCCATTATAAAGTAACGGATGAACGTGGTTGTGTTGTTGCACGTGCAATCTATAATGTGTTGGGTATTAACAGGGAAGGACATAAGGAGCTACTCGGAATGTATATATCAAGAAATGAGGGAGCAAACTTC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATACAGTCTACTTCCATCACAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //