Array 1 1280-3031 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZWU01000018.1 Neisseria meningitidis strain Neisseria meningitidis isolate B325, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1280 36 97.2 30 ........G........................... GGACGGCGGTTCTAAAATATGAAAACTCAA 1346 36 100.0 30 .................................... TATCATGATGAGCATATTTATGAAGAGGTA 1412 36 100.0 30 .................................... CTGGAAGACTGGTAAGAAACGAGATGCACA 1478 36 100.0 30 .................................... CGATTTACCACCCATAAAACCACCTCAAAA 1544 36 100.0 30 .................................... CTGAAAGGTAAGGAACGGGCGGCTTGTGAG 1610 36 100.0 30 .................................... ACGGCTGCCGCAACGCCGCCCGAAACCATC 1676 36 100.0 30 .................................... GAGCATCTATTAGGGGTGAAGGTAGATCTT 1742 36 100.0 30 .................................... ACAAATCAATACCATGAAAACCCCATGCGT 1808 36 100.0 30 .................................... ACAAATCAATACCATGAAAACCCCATGCGT 1874 36 100.0 30 .................................... ACAAATCAATACCATGAAAACCCCATGCGT 1940 36 100.0 30 .................................... ACAAATCAATACCATGAAAACCCCATGCGT 2006 36 100.0 30 .................................... AGACTTAGCACGTTTAACTTGCTTAACAAG 2072 36 100.0 30 .................................... CAAAAACTTTTTAGGGGGGTCGAAAAATAC 2138 36 100.0 30 .................................... CAAAGCTATAAACACGTTTATCTGTTGTTA 2204 36 100.0 30 .................................... ATGGGGTATGCAATTACATCGCTTGGGTTT 2270 36 100.0 30 .................................... AAATTATACCAATGGCGAAAATCTCGGGCG 2336 36 100.0 30 .................................... GCTCAGTTGGAACAATGAATACATCTTGAA 2402 36 100.0 30 .................................... ATAGGTTCTATTAATACGTCTTTCGTCTTC 2468 36 100.0 30 .................................... TTTTCCAGCGCGATGAGATACCCGGCATAG 2534 36 100.0 30 .................................... CTTTTGCCGCCATCGACGCAGCCGACAGGG 2600 36 100.0 30 .................................... ACTTAATTTATTCAGTTCTTCTTTATGCCA 2666 36 100.0 30 .................................... TTCGTACCCAAAAAATCGACCGCGTAACGG 2732 36 100.0 30 .................................... ATAAAAAATCGAAAAAATCAAAAATACTAG 2798 36 100.0 30 .................................... CGTTTAAAGACAGATAACCGGATTCGCGTT 2864 36 100.0 30 .................................... CATGGCGGTCGTCATATGGGGGTTCCTTCG 2930 36 100.0 30 .................................... GCAAGATACATGGTTACAAGCTGCCCCCAT 2996 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 99.9 30 GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : TACCCCAACGGGAAATCCTTATTCTATAAGGATTTCCCGTTTTATTTAGTCTGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATGCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //