Array 1 7184-7566 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJTT010000198.1 Corallococcus exiguus strain AB038A NODE_198_length_18183_cov_31.6887, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================= ================== 7184 28 85.7 45 .C....C................C.A.. TCCGCGCATCGGCCGGGACGGAGATCCTCCCTGGGCGTGGGGTTC 7257 28 100.0 45 ............................ TCCGCTGCCAGGAGGGGGCCGGGGCCCACCCTGGGCATGACGTTC 7330 28 96.4 42 ...........C................ CTCGCTGCCCGGGTGGAGCGGGGCCCACTGGGCCACGGGCTT 7400 28 100.0 42 ............................ CTCGCTGCCCGGGTGGAGCGGGGCTCACTGGGCCACGGACTT 7470 28 100.0 41 ............................ TCTGCTGCCCGGGCGGAGCGGAGCTCCCGGGCCCTGGGCTT 7539 28 96.4 0 ...........C................ | ========== ====== ====== ====== ============================ ============================================= ================== 6 28 96.4 43 CAAAACTTGTCGGACAGTCGGACAGGTT # Left flank : TGACTGTGGGCGTCTCCGCGGGGCTCGCGTTCGGCACAGCGGTGTACTGCGCCGCGAACCGAGTGCTGCCGTGGGCCCTGGATCGGCGAGGCGACTGGGAGTTCGGCCTGTTCCTGGGCGCGTGGGGGCTCGCTGTGATCATCGCGCTCGTGCCACGAGGGTCGTCGCGCCGGGTGGGCAGCGTGCTGAGCGCCGCGGCCGCGGTGCTGTTCGGTGCGGTGGTGGTGGGCGACGTGGTGACGCAGGACGCGAACCTGTTCACGGCGCTGTCGCGCGGTCTGCCTCCGGTGTTCATGGCGGAGGCGTTCCTGGCCGCGATGGCGCTGGGTTGTGGCGGGCTCGCGTGGGGTCTGCGCAGGCGCAAGACGGCGGAGCCCGTGTCCGGTGGCGCCGCGCCCGAAGGGCCTCTCGTCAAAGCGTAATCACAGGGGCTGACATTCGCGCGAGACGCGCTGGGCCCCGGACTCCCATGCAGTCCGCCCCCTGCCCGACGCGGTCCG # Right flank : TTTTTCGGTGCGCCACCGACGGGGCGCACCGGCGGGGTTCTTACCTTCTCACCCAGGGGGACAGCCTTTGTGTCCGCGGACCTGTCGCTGGGGGAGAAGTCCCGTCAACGCGTGACCGTGGCGCTTCCGGCGTCTCGAGGCGCGGCGCCCGGGAACGACCGAGGCCCTCGCTGGCGGAGACGTGCCAGGCGAAGGCCCCAGGGATTTCGCGGTGTGTGTGATGGTTTCAGGCCCTTCCGGCGGTGAGGCTTCCGGAAGGCCCCTTCAGGCCTGCGTGATGGCTACCAGGTGTAGCCGACCGTGGCGGACGCGCGGCGGCGCTCGCCGTAGAAGCAGGCCGTCGCGGAGCTGCACGAGGACACGTAGGTCTTGTCGCCCAGGTTGGAGGCGTTGACGGCCGCGCGCCACGGGCCGCGCTCGAAGTGCACGCTCGCGTCCGCCAGCGTGAAGCCCGGCACGTCCAGCGTGTTCTCGCGATCCGCGTAGGAGCTTCCCACGCC # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAAACTTGTCGGACAGTCGGACAGGTT # Alternate repeat : CAAAACTTGTCCGACAGTCGGACAGGTT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA // Array 1 41045-41266 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJTT010000022.1 Corallococcus exiguus strain AB038A NODE_22_length_66500_cov_29.3687, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ========================================== ================== 41045 27 96.3 33 ..C........................ GCCAAGCCGGCCGAAGGCGAGGAGGTCGCCGCG 41105 27 100.0 39 ........................... CCGAAGCCCGAGGTGGCGGAGGGAGCCGAACCCGCCGCC 41171 27 100.0 42 ........................... GCCAAGCCACCCGAGGGCGCCGCACCCGCGGAGCCCGCCGCG 41240 27 88.9 0 ..C........T........T...... | ========== ====== ====== ====== =========================== ========================================== ================== 4 27 96.3 38 CCGAAGAAGCGCGGCCGTCCGCCCAAG # Left flank : CTGACGTGGAGGAGATCTACTCGTTCCTCCGCTCGGACAGTGACAAGGCGGACCTGGACTGGAAGCAACGCGCGCGCACCAACCTGGACCGAATGACCCAGGGAGGCATCCTGGGTCTGGCGGAGGTCGTCAAGGGCCTCCAGGTCCTCAGCGAGCTGCGGCCGCTGCCCACCAAGGAGCGCGAGCTCTACGACAACGCCCGGCACCTGCTGGTCTCGGAGGTCGCCGCCGCGCTGGGCACCGCCGAAGCCAACGCCGAGGACTCCATCGACATCGTCCTCTTCCCGCCCGGGAAGGAGCGTCCCAAGCGCACCGCCGCGGAGTTCGCGCGGCCCGGTGGCGAAGAGGACGACATGGACCTGGACGGCGACCTCATGGGTCTGGAGGGCGGGGAGCTGGACCTGCCCTCGGACGAGGAGCCGCAGTCCGAGTCCGAGGAGGAGTCCTCCGAGGAAGAAGGCGGCGAGGAGGAAGGCGGCGAGGAGGGGGGCGAGGACGCT # Right flank : GGCGAAGCCGCCCGAGGACGAGTGAACCCCACGGCCCTCCGGCCGCCCGCGTCGCGCCGAAAGCGCGCGCCCGGCACCGCGAGGGCCTTCCCGCCGAGGTGACGCCCCGTGATTCGCGTCGTGACGCTGGACCCCTTCGACGACAAGCAGCTCGCCAAGTTCAACCGCACGCTCTACACGGCCTTTGGCGTGGGCAGCGAGCACAGCGGCTCTGCGGAAGTCCCCGCGAGCATGTCCGAGCCCCTGGACGCGGAGAAGCTGCTCGATGAGGTGAAGGGCATCCGGGCCTACAAGGACGACAAGGTGCTGCTGCTCACCTCGCGCAAGCTGAAGGACCGGGACCTGCCCAGCGGCAAGGCGCCCACGTCGGGCTTCGCCAGGTACGGCAAGGACCGGGCAATTCTCTCCATCGCGCCGTTCAAGGACCTGGAGAAGGACTTCAAGCCCATCGCGCGCCACGCGCTGCACCAGTTGGGCACGCTCTGGGAGCTGCACCACTG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGAAGAAGCGCGGCCGTCCGCCCAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.10,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-21.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 109881-110203 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJTT010000002.1 Corallococcus exiguus strain AB038A NODE_2_length_154707_cov_28.984, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================== ================== 109881 29 93.1 46 C........................G... TTCGCGGCCCGGCTGAGGAGAGGGCTCGTCCCGACTGACCGAGTTC 109956 29 100.0 43 ............................. TCTCTGGCTCGACTGAAGGGGGAGCCCCTCCCGGCCGAGGTTC 110028 29 100.0 43 ............................. CCTCTGGCTCGACTGAGGGAGGCGCCCGTCCCGGCTGAGGTTC 110100 29 96.6 46 ..G.......................... TCCGTGGTTCGGCTGAAGGGGGAGCCCCTCCCGGCCGACTGGGCTC 110175 29 93.1 0 .G.G......................... | ========== ====== ====== ====== ============================= ============================================== ================== 5 29 96.6 45 TCCAAACCTGTCCGACTGTCGGACAAGTT # Left flank : AGATGATGACCTGTGGCTCGAAGCCGAGCGCATCCAGGCCCGCCTCCGCGGTCTCCTCCCGTGTCAGGTCGATGCCGTGGATCCGCGTTCCCGCGTCGGAGGCGCCTGCATGAAGGATGCGGAACTCAGGGCCGCAGGTGTCGTGTGCCTGGGCCGAAAGCTCCCGGGCCACGGCCTCGTCTTGCGCGATGAACAGCACCCGCCGGCCGCGCAGTTGCGCCGCTCCGGTCGTCAGTGCCGGACGCTCGACGAGCACCGGCGCGTGGTAGCGGATGGCAGCCGAGTGGTCGAAACCGTCAGCGGTCTCCGGGATGGAGGCGGAGCTCGACGGCGAACGTGCCTCTTCCAGGCGATCCGAGCCCGCCCGTGCCTGCGCGGCACCGGTAGCCGTGGCGGACGCCTCGGGTTCCGAACGCGCGGGGAGCGTCGCGATGGCTCCTGGTGCAAACGGAGCGCCAGTCCCACGGACATCCAAGGTGCCCGCCTCCGGACCGGAGCGG # Right flank : TTCCGTGGTTCGCCGCCGACAGGGCGGTCCCGCCGAGGTCTCGATTCTCAGCACTGGAGACAGAGGAGATGCCCGAGGACCTGGCGGCGTTGTCCATAACGCGGCGCTCCGCGGACAGAGGTCCTGCCGCCACCGCTTGTTCCTCCGGTGCTCCAGTCTGGGCTCCGAGGTCAGGATGAAGCTGGAGCACCAGCTGGGTGCCGGTCGCGGCATCCGGATGGAAGCGCAGCGTGAGGGCCTGTCCTTCGGCGGTGGCCCGCACCGCGCTCAGCACCTCCCGCGCTTCGTGGGCGGAGTGGGGCGGCAACGTGACGCCCGCCCCTGAACCGGAGCCCGCAGCTTCGGACATCCGCAGGTGGCACAGCGGCCTCAAGCCCCTCGCTTCCGCCTTCGCGGCCGTAGTCACCGCCAGCATCGTCATGCCCTCTTCGGGCGCGGATGCAGCGGCGCTTTCTCCGGGCCTCTTCACGTGAGCGCTGCCCACGAGTACCAGATCGAAG # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCAAACCTGTCCGACTGTCGGACAAGTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.60,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //