Array 1 29934-29759 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQUT01000025.1 Teredinibacter turnerae T8602 A3CMDRAFT_scaffold_24.25_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =================================== ================== 29933 35 100.0 35 ................................... TGGTAGATAATGAGATGGCATGGCCATACATAAAA 29863 35 100.0 35 ................................... CTATTTCTAGCGCTTCTAATAGGCATCTAATAAAT 29793 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== =================================== ================== 3 35 100.0 36 GTCGCAATCGACATTAGCCGCTAAGGCTGTGAAAC # Left flank : GTATACCTTATAAAGACCGAGCACTACACTCTGTTTTTGAAATTGCGCTGAACAACAACCGTGAACTGGTGGCCCTGAAAACACAATTGCAAACGCTGATGGAAGAGGGGGACGATTTGCGCTTTTACTACCTCTCCAAAGAGACACGCCAGCAAAGTGAAGACGTTTACGGCAACGCCATTGCCGATTTTCCGAGTGTGATTATTGTGTAGCACCAGTGGCGAAGCAGAGTTATCGGTTTCGGGCGAAACGAAGGACAAACCACGTCAGTTCAGCACAAAACAACATAAAAATACGAAAATTCAAAAATATATAAGAATAACTTCACGTATTACATTAGCTTTGCGTCGCCCAGGCAATAAAATCAAACACTTAGCGTTGCTCCGGAGGCAAATTAGCGCGATAATGCACCCTAAATCAGCCCAAACTAACGGTTTGCAAAGAGCGTCGCCCAAACGGGGTTCTAGCATGCTGATTTATAAAGGGAAAAATGGAGAGCT # Right flank : ACGAATGCCATCTTGGTGATTCCCTCTTGTGAAAGTCGCAATCGACACTAGCCGCTTGATGTGTTCGGCTAAGAGGGAAGGTAGTGGTAGGACCGGCAAAAACCGGTAGAGTCCGGCGAATCCAGAGGCACCCGGCGGAACATTGAAATGCGCGAGCCAACAACCAGCACGCTTTAAACGTTTGGCTCACCACTGTTTTTTTTAGTTCACATGCCTGCCAGTATTCGGCAGGGCAAATACAACCCGCAAATGGTAACCCGGCTTAAATCGCCAAACCTGAATGCCGCTATTTCATCAAATGCCGTCATTCACAACTGTCTCATGTATAACCTAGGTGTCCACCGAACAGGTACAGCACAATGCCGATATGCACCTGTTGCTGTTTTTCTAACTCGTTAACCTTATAAACACCGGGCGCAACGCGCTGCGCTTCGCATTTGAAATTGCGCGGAACAACAAACGTGAACTGGCTGCCCTGAAAACACAATTGCAAACGCTGA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATCGACATTAGCCGCTAAGGCTGTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 1 113394-113149 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQUT01000002.1 Teredinibacter turnerae T8602 A3CMDRAFT_scaffold_1.2_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ==================================== ================== 113393 35 100.0 36 ................................... ATTGAGACAAAGGCGTCCGTACATATTTCCATTGCA 113322 35 100.0 34 ................................... GCACACAAACATAGCCGGTATAGGCGTCCATCCT 113253 35 97.1 35 ..............A.................... TCACGATTTTGACGTTCAGCTTCGGCCTTAGCCAG 113183 35 85.7 0 ..............A.......A..A.T..G.... | ========== ====== ====== ====== =================================== ==================================== ================== 4 35 95.7 35 GTCCGAACAGGGCTTAGCCGAAGGGCTGTTAAGAC # Left flank : AACATTGGGAGAACCGCCGCTGATTATGTTCGTGTTTAATCCACAGTCGAAAATACAACTGCATGACGCACAACTTGCGCAACTTAATCGGTATAGTAACTACACGGTAGTGAATTTCCCAGGGTCGCTGCAGACGGCATTGGGAAATACCTTGAATAGTGTATAACGCACGCTAAGGCGCGCATACGAGAGAAAAAAGCGAGCTTGTAGTTAACTGTCGGTGTATCAAATCCACCTGAAAAATAAGGCCAGGGTACGGGCCAATACTATAATCCGCCACATCAAACCTTGGCGCTAGTTGTAACATTTTGGTTAACGGCTTGAAAAATAACGTTTTTTACCCACAACCGCGAGGAGGTTTGATTATTCAATGAAATCAACAGGTTACAACGCCTACGACCGCCAAATTACGGCTCAAAGGCACCCAAACCGGAAACGCTGGCGGAGGTTTGACAAAAACCACGCTAAGCGCCTGATTATAAAAGGCTTATTTGAGTACT # Right flank : CGTGGCTTGTGCTTTATCGAAGCCCTGTCGTCGTGGAGACATTCACCGGATAATTTAGGTCAGGCCTCAGTAATACGACTGAAGCACGAGCATTACGTTTAATTAGCGCTGCGTTCGATTTATTTAATTGTTGGGTGAAAAAGCGTAAATGATTAAATTTGTTGGCCCGCACGCGGTGTTAATTAATTGGTACATAATGCCGCTGAGGAGACGGTGGCGCGGCGTTTCGACGCGCGAATTCCGCAAGTATGGAACTGTGTGGGAGAGCCCTGATAAAAAGGGTGTTTTACCACAACGTGCATTAATGTTTTTTCACACAATTTTATTTTTATGCTGAACACGGCGTTGAACGTGTTTGTACCGACCAGCGCGCAGAAAATACTAATAAATCTGATTTTATCGGGGTTGTCACGGGAGGAATTTGGTGCTCTACAAAATCTTGCAGCACCTATACTCCACCACGCATGTCTACCGGTCGCCAACCTCAGGTAGGCACGTAT # Questionable array : NO Score: 2.65 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGAACAGGGCTTAGCCGAAGGGCTGTTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.60,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 2 114868-114694 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQUT01000002.1 Teredinibacter turnerae T8602 A3CMDRAFT_scaffold_1.2_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ========================================= ================== 114867 31 100.0 40 ............................... AGACTTGTCTCCAGTTGCAGAATAATCTTCCAGATTATCC 114796 31 100.0 41 ............................... AGACGCCATGTTGGCCGGACGGGGTGTTTTGCTACCTTTAG 114724 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ========================================= ================== 3 31 100.0 41 GTCCGAACAGGGCTTAGCCGAAGGGCTGTTA # Left flank : ATGAATAAGCGCGAAAAAGAGCACGCGTGAAGAGATGTTACCTTCAAGGCTTACGCTGTGGCCATTCGCCAGGTAAATAGTTAAATGGTTAAATGGTTAAATGGTTAAATAGGTAAAGAGCTAAATAGCTAAACAGTGTATTAACGCAGTTAAAGCCACTACAGGTTTTGGCCGCCGAAGTATTTAGCCCGCACACCAGGGTGCGGCAAAAAGTAAGGATGTGGATGGCCATCCCATTGCCCAGTACCCCGCGGTTATTGTGTTGTAATAAGCCGCCAGATCAAACCGTGGCGCTAGTTGTAACATTTGAGTTAACGGCTTGAAAAATAACGTTTTTTTACCCACAACCCCGAGGAGGTTTGATTATTCAATGAAATCAACAGGTTGCAACGCCTACGACCGCCAAATCACGGCTCAAAGGCGCCCAAACTGGAAACGCTGGCGGAGGTTTGACAAAAACCACGCTAAGCGCCTGATTTTAAAAGGCTTATTTGAGTACT # Right flank : GAGTTTTTGACGGGTTGTGGATGCGCGCGCAATCGTCATCTCCCACAGCGAGTCGAATCTGTGCGAGTCAGAAAATAACGTGACAAAATAAGGACGAGTCAATCAATGTATCAGTTAGTTATGGGCGTTGTTATAGGTATGTTGTTGTCTGGCTTTGCCGTCGCAGGCGATGAAAAAACAATACCGCATGAGACGAGTTGTGTGCAGGCCAATGAACATTACGAAAAAATGGTTGATAGGATAGTCAACGAACGACAAAGCCTTGATCGTGCGTCCGAGAGGCAATTTCAGACTGTAAAAACGCTGTTCGAGGCGAACAACCAATCGGTTCTAGGGCTAGTTGATAAAGCGATCTGGATTTTCTCAACACTGTTTTCAGTACTGTTTTTTGTTGCCGGTGTGTCATTTACCTACTTTTTTGGAAATACCAGAAAAGAGTTTCGAAAACTTGTAGAAGACCAGCAGCAGGCGCTGAAAAGCCAACTGGAAAAAGAGACAAA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGAACAGGGCTTAGCCGAAGGGCTGTTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.20,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.01 Confidence: HIGH] # Array family : NA // Array 1 77278-79368 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQUT01000010.1 Teredinibacter turnerae T8602 A3CMDRAFT_scaffold_9.10_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 77278 37 91.9 34 ........AG...........T............... TTGCAAGTAAACAAGCGAATAACTCCGCCTGTAA 77349 37 91.9 35 ........AG...........T............... TTCGCGTTACGTAAAATCCGCGCGCGTATTCTGTC 77421 37 91.9 34 ........AG...........T............... CGCAGCGAAAATGGCGACTACCACCATTACCAGA 77492 37 94.6 34 .........G...........T............... GCCACGTCGTCAGAATCAGGCATATCGTCAACAT 77563 37 100.0 34 ..................................... CCCTCCAGGTCTTTAAAAATTTGTTCAAGGCTAC 77634 37 100.0 33 ..................................... TTGTATACGTTCATGTTACCTCTTAACTATGTT 77704 37 100.0 34 ..................................... CCCTCCAGGTCTTTAAAAATTTGTTCAAGGCTAC 77775 37 100.0 34 ..................................... TCAGCTAATTGAGTATTGAGGGCATCAATAGCGG 77846 37 100.0 33 ..................................... TCTTTGTAGTCAGACACCAGATCTTTACCGAGG 77916 37 97.3 34 .........G........................... CAAATGATTACCCTCGTTTTGGACTACGAAAATG 77987 37 94.6 34 .............TC...................... GCTATCAGTCGGGGCTCACCAGGCATGCGCATTG 78058 37 91.9 35 .......C.G...........T............... CAGCAGTGGCTTGATCTTCTGAATATTTCGCTGCG 78130 37 94.6 33 .........G...........T............... GGCTTTAATCAACGCCAGTTTTTTTCGTCGTCG 78200 37 100.0 35 ..................................... ACTATCGTTTTGTGCTGTCGATACAGGCATGCTCT 78272 37 100.0 34 ..................................... AGCGTATTGGCTAGGGCGCACATGCCGTTATAGT 78343 37 100.0 36 ..................................... CTGTCTTTATCTATCGCGTCAGTGCCGACTACGACA 78416 37 83.8 34 ....T.T..G...TC......T............... GCCCCAGCAATCAATGCGTCTTCGTATTCGTCAG 78487 37 94.6 35 .....A...............T............... TCGAGAATGTCAAGGTAAGTCATTGGGCCCTTGTT 78559 37 94.6 35 .....A...............T............... TTTTTGAAGTCCAGTTTCACGCACGGCGATTCGGA 78631 37 94.6 17 A........G........................... CCTTGAGTCGATCAGAC Deletion [78685] 78685 37 64.9 35 TT..TAT..CGAA.AGC.T.................. CACTGTGAGCGGCAAGCCAAAGGCAAAATGCCGGG CC [78696] 78759 37 97.3 37 .....................T............... CATATATATGCCTCCAGGCGTTAGTGGAATGAAGAAA 78833 37 91.9 35 .........G...TC...................... AGCTTTAGGTACCAATGCCGCAACAGAGTCAACAA 78905 37 91.9 34 .........G...TC...................... CGTTTTTTAGCGTTACGTAACCTTGTGTATAAAG 78976 37 97.3 34 .........G........................... GAGCACAGAAAAAATACGGTTGTCCCGCGGTAAC 79047 37 100.0 34 ..................................... CTGCGAAGAAGTGGCACTGGGTGTATCCCATAAG 79118 37 97.3 34 .........G........................... CTGTAGTCTCCCGCATCGTCCTTGTCCTGGACTG 79189 37 97.3 34 .....................T............... CCACAACGGCTGTCGCGTTTGCTCATCTACCGGC 79260 37 97.3 35 .........G........................... CAACCGCGCGCGCGGGTTGCCATCCGCTGCGATTG 79332 37 89.2 0 .........G...TC.................A.... | ========== ====== ====== ====== ===================================== ===================================== ================== 30 37 94.7 34 GCGTCGCTGAAGGCTTAGCCGCTAAGGCTGTTGAAAC # Left flank : ATTGTAGCGCGAATAAAAAGCGGGCCGAAGCGAACTGCGGCACAGGGGGTTTAATAGTAAAAATTCAAAACAAGTTAACCGGTAAATTGCGTAAGCCGCTATTATTATAAACTGGTGCAAGAGGTTTTAATGTTTGGGGTTTTCATCTCGCAATGGTTGCAGCACCTTTAGGCAGGTTGTAAAAATAGCTAGCAACAAAAAAAGCTAACAAATAGCAGCTAACAAAGAACGGGCAGCACAAACAGGCGGTTTTTCGCTAACCTCTGGTGCTGTTTGGGGCCTTGCAGTGCACGGCGTAAAAAAGCCCGGTTAAAACAACGGGTTAGCACCGATTAGCGCGCTATTTTTAAGAAGTTGGTTAGCGAGCCGTTAAAAATCAAAGAGTTAGTGTGGATATGGCACAAATTATCGGTATACTCGATACGCGACTATCAGGAAAAAGCGGGGTTAGCGAATATTGCACCTGCAAGCCGCTACCCGCAAGGGCGCCAGCACCCGGC # Right flank : CCCGATACCAACAGCGAATGCCATGATTGATTGACCTTGCGGTTGTGGGGCTGGTAATTTTAGGCCGGTGGCCTAGTGTGGTTGTGGCCCCAAAACCCAAGGATATTTTTCGACATGGAGAGCAGATGCATGCGCGATTCGCTGCTGCCGTTACAGCACTTACTGCCGTTGCGTAGTGTGGTGGTTCGCTTGCAGTGTGTAACCGCGTGCGAGTTAAGTTTTTTCCATCAGCCCGCCATGAGTGCATTCCTGCGCAATTTACTGGACCACCCGGATCAGTTCGATCAGTTCCTGCTTGCCGATACGCCCGAAAGCGGCCGTCTCTGTTATAACGAAGGTGATTTTTACCGATTTACCGTGCTTGCACTGGCCGGTGGTGAGGTGCTGTTGGCGCGCCTGCTGGCGCGTTTACGCAATTTACCTGCGGCGGCAGTTGCAGCCAGGTGCAGCGGCGCGTTTGCCGATAATTGGCGTTGCGCGGGCTTTAGTGATGGCTTTAA # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:-0.03, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTCGCTGAAGGCTTAGCCGCTAAGGCTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.10,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-26] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //