Array 1 37363-33947 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCNP010000009.1 Desulfovibrio desulfuricans strain DFI.2.73 IFEMPJGG_9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 37362 32 100.0 36 ................................ TTGGACTCGGACGGCGCGCAATCGCTGTCACCATCG 37294 32 100.0 35 ................................ ATTGACAATGACATAGGGATGGAAAGGAAACGAAA 37227 32 100.0 33 ................................ TACGAAATCGCGGCGCCAATAGAACCGCAAGCG 37162 32 100.0 35 ................................ CGCTGACAGTGCTTCGGCTGGCAAGGGCGCTGGCA 37095 32 100.0 35 ................................ ATGCAGGACTTGGAAAACAATATGCTTACCCTGGC 37028 32 100.0 34 ................................ AACAGACTGGCGGGGGGTCTTACCATGCCGATGC 36962 32 100.0 35 ................................ TCCCGGGGCGGCATAGCTTACGGACGAAGCCGCGC 36895 32 100.0 33 ................................ TCTTCGGCGTAGCCGTCCGCCTTGATGGTGGTT 36830 32 100.0 33 ................................ GCTGTGCCCGGTGTATGGCGTCTATCTGCTCCT 36765 32 100.0 33 ................................ CTGTCAGGTTTTTGATGGTATTGCGCGTGACGG 36700 32 100.0 34 ................................ CCGCTGGTCGTGATTCGGACGAAGAAAACCAGTT 36634 32 100.0 34 ................................ TGCGAACTTCGGAAAGGAATTTTCCACGGCGCTC 36568 32 100.0 34 ................................ TGTTCTCAATCACTGAAAAGGCTTTGTAGCCTCT 36502 32 100.0 33 ................................ CCGCTAGCATTATTGTAATAAGGCTGCTGGGCT 36437 32 100.0 34 ................................ ATCGCCCACCAGCAGCTCGCGCGCGCCGCCAATT 36371 32 100.0 35 ................................ AGCGCCAGGAGCGTGCGTTCCTGACCGCACAGCGC 36304 32 100.0 34 ................................ AAGGTACTGGTACCAGGTGGGCGACATGAGAATG 36238 32 100.0 35 ................................ AGCGCGCTTGGCATTGTTAAAGCGGTCAACGCTCC 36171 32 100.0 35 ................................ TTGCAAGGGCATTAGCCATATCGCGCCAGCCAGCC 36104 32 100.0 34 ................................ ATGGTGGCTATAAGAAACTGCGCTGACCATGCCG 36038 32 100.0 35 ................................ AGCTGAGTTATTCTGACCTCCAAGCACGCACCCAC 35971 32 100.0 35 ................................ ATGGCTGGCAACCGCGTGGGCAAGACTGAGGGCGC 35904 32 100.0 35 ................................ ACATCCTGAAAATTGTTAAACCGCTCACGCCCGGC 35837 32 100.0 34 ................................ TTGCCGATGCCTTTGCTGAAACAGAACTCAGCCT 35771 32 100.0 35 ................................ GACTACATGGTTGACGAACTATACGGCCATGATCG 35704 32 100.0 36 ................................ GGGTATTACCCCAAGCTTAATTGCAAGCAGGGTAAA 35636 32 100.0 35 ................................ AGTCAGCCTGTCCAGCGCGCCAGCAGTTGAGCGAA 35569 32 100.0 35 ................................ GGGTTGTCGTGTGCGGCGACCGTGGGCCTCATGCT 35502 32 100.0 33 ................................ AGCATACACCCCAGCGGCAACTGAAATTGTTAC 35437 32 100.0 33 ................................ AAGGGATTGATCGTCATAATCAAGCCACTCCCT 35372 32 100.0 35 ................................ AGGCAGGTTGGCCGGAAGGTTCGCTACGCGGTAAC 35305 32 100.0 35 ................................ CAAGTGCGGGCGCAAGATCATCTACACGCGCGCAG 35238 32 100.0 36 ................................ CAAGGTGGGCGGCTTCTCGTGGGCCTGCCCCGGCAG 35170 32 100.0 33 ................................ TCGCTCAAGACCGGGGCGCGCTCAACTGAGATA 35105 32 100.0 35 ................................ AGGCCGATAGAGGTAGGGCTTGACTTGCCGTCCTT 35038 32 100.0 33 ................................ AAAATAAGCTTGCCTGGGATTGTGTCAATTTGC 34973 32 96.9 35 .......T........................ AGGAAGCGAAGCAAAGCCTCCAGAACCAGTTTGAA 34906 32 100.0 35 ................................ TTGTTACTTATACCACCTTTGCGAGCAGCGTATTA 34839 32 96.9 35 ........T....................... AACCCTGGCCAGCCACCCACTTACGGCATGCTGCG 34772 32 100.0 34 ................................ CACCCAAGCCCGGCACGGTGCAGATATCCTCAAT 34706 32 100.0 36 ................................ AGAGTATAATGACAGCTATTAGCACAAAAGTCGAGG 34638 32 100.0 34 ................................ GCCCTACCTGTTTGAGCGCGTTAAGGGAATTAGC 34572 32 100.0 34 ................................ AGCGCGTATTCCCTGCCAACTCCAAATGTGGAAT 34506 32 100.0 35 ................................ ACACCGGAGGGGATAGGCTTCGCTCGCCAAGAGGG 34439 32 93.8 34 .G............A................. CCTGCCGTGCTCCTCTACCGCAGGGCTGAGCCGG 34373 32 100.0 34 ................................ GCCTTAATCCGTCAATTCGGACTCACCTATCCCC 34307 32 100.0 34 ................................ AATGCGATAACGGAATCCGTCCATGATCTTGATC 34241 32 100.0 33 ................................ TTTCCGCGTCCCTGAAAAAGCTGGCGCTGGCAT 34176 32 100.0 34 ................................ AATTCGCCAAGATGCTTTCCGGCCTGACCAACTC 34110 32 100.0 34 ................................ TGTTTATCAGCCGTGAGGTTAAGGACGAAACTGT 34044 32 100.0 34 ................................ TTGACGACGACATGGCCCATCAGCCGGTGGAAAC 33978 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 52 32 99.8 34 GTCGCTCCCCGTGCGGGAGCGTGGATTGAAGC # Left flank : TGCGCCAAATAGCCCGCCATTGCGAAAACTGGGGGCAACGGGTGCAGTTTTCAGTTTTTGAATGCGTGGTTGACCCCGCCCAATGGGTCGCCCTGCGCAATAATTTGCTGGAATGTATGGATGAAGAAAAAGATAGCCTGCGTTTTTACTTTTTGGGTGCCAACTGGAAGAATCGTGTTGAACATGTTGGGGCCAAACCGTCCTATGACCCTCAAGGGACGCTGATTCTGTAAATCGACAGCATTATTACATGCGGACGGCTGAGAGAGTCAGCAGATATCAGACTGGCTGAAGGGGACTCTGTGAGCTGCTGGCAATAGCCCGCGAGAACCAGAAGCGCACAGCATTTTTCTGGGAGGTTCTCGATTTTTTAACAATATGATTTTATTACGGTAATTTTTTAAAGCAGATTTGTTTATTGCATAAATTGATCGAGATACGTGGCCTGCTCGAAAAATGCCCTGAATATCATTGCGGGGCAAAGGTAAAAAAGGGCCACA # Right flank : GGGCCACGGTGGGAACGCGACGAGTTCGGGCATGTCGCTCCCCGCGCGGGAGCGACTTATGTGGATTGATATTATCATGAGCACAGCCCATACATGCCGCAGCAACTGGAACCATCTGTTCTGATTTATCTATTGCTTTGTTTTAAAGATGTCTTGCGTAAAATATATAACCTGTTTTGCAGGTTAGTTATAAATATTATGCTGATATTAATCCAATTTCGATTACTTGATTTTTATCCTCGTCACCATAATCCTTTCCCGCCGTCTTCCGATTAATACAGAAGCGGTATCTCTGCATTTTGCCCCCTCAATATTCTCCATTGAAGGGGTTGATCTTGCAGGCAAAAATTTTATATGAGCAAAAGTGTCCCGGAACTGTATGATGGCTGCAACAATAGCAACGTATCTGGTGGATACTGTAAGCAGAATTCTACACTTGCAAAAGGGCTTGTTATGAACAGATCCATATCGCTCAAGCTGATGCTTGGCATTGCGGCAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGAGCGTGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.90,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //