Array 1 74693-73140 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANRD01000015.1 Neisseria meningitidis 88050 NM88050.contig.14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 74692 36 94.4 30 ........G...A....................... TTTTTGTATCCATTCCCAGCCGGAAATTAA 74626 36 100.0 30 .................................... CTTCTGCCTTTTTACAAGCTCGCTTTCTTT 74560 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 74494 36 100.0 30 .................................... CTTTAACTTTGACCGTGTGCAATCCAGTTA 74428 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 74362 36 100.0 30 .................................... AGTATTCGTCGATGATGGAAACTCGAGCAT 74296 36 100.0 30 .................................... ATGATGCAGGCTGCTCCGTCATCGTCTGCA 74230 36 100.0 30 .................................... CCAAATAGAAATACATACGCCGAGTAATTA 74164 36 100.0 30 .................................... TTTCTTTTTGTAATTGTTCTGCCTTTTTTA 74098 36 100.0 30 .................................... CAATAACGGCGAGTTTACGCATCAATGCGG 74032 36 100.0 30 .................................... TACCCACGGCGGAAACCATTGCCACAAAAC 73966 36 100.0 30 .................................... TTAAAATAATAACCCAATACACGATGTTAA 73900 36 100.0 30 .................................... TCCTGCCAATTATCATACATAAGATTTTGC 73834 36 100.0 30 .................................... TTGCGTCTATGGTGTCCTTTGAGATGTCCA 73768 36 100.0 30 .................................... AAAACCAACCGGGTATTCATACACAGCCAA 73702 36 100.0 30 .................................... CCGTTGATGACGGATGTGTCGGGTTGCGGA 73636 36 100.0 29 .................................... TCGGCCGCTTTATTTCTGCCATATCGACG 73571 36 100.0 30 .................................... CCTATGCCTGTTATTGTTTTCAGCCTTTTG 73505 36 100.0 30 .................................... TTTAAAACCGCAAACCAGTTTGTATCCTAT 73439 36 100.0 30 .................................... AAAAAAGTTGCGGGATAAGTTACAGTTTGA 73373 36 100.0 30 .................................... TTCTTCAAATTCCTTAGACGCAATTAATGC 73307 36 100.0 30 .................................... GAATCTTTAAAGGCAGATTCGGGATTTCCC 73241 36 100.0 30 .................................... TGATGCGGCGATACAGCGAGCCAGTTGCAT 73175 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.8 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTCTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //