Array 1 37486-40697 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJENE010000021.1 Acinetobacter baumannii strain MRSN854 MRSN854_contig00021, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 37486 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 37546 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 37606 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 37666 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 37726 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 37786 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 37846 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 37906 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 37966 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 38026 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 38086 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 38146 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 38206 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 38266 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 38326 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 38386 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 38446 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 38506 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 38566 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 38626 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 38686 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 38746 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 38806 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 38866 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 38926 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 38986 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 39046 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 39106 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 39166 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 39226 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 39286 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 39346 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 39406 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 39466 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 39526 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 39586 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 39646 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 39707 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 39767 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 39827 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 39887 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 39947 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 40007 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 40067 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 40127 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 40188 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 40248 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 40308 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 40368 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 40428 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 40488 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 40548 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 40608 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 40668 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //