Array 1 318-28 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACQL01000088.1 Actinobacillus minor NM305 Contig_168c, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 317 26 72.2 30 ----------.......................... TCGTCCGCAATGTACACGGATCGGGAAATC 261 36 100.0 30 .................................... AGTAACTTTTTTAATTTGTCAATCATTATT 195 36 100.0 30 .................................... ACGCAATAAGAGATCGGATCGTGATAGCTT 129 36 100.0 30 .................................... CAAATAAGTGAGCGTAAGATCAAGTTATTT 63 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 94.4 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : | # Right flank : TATATGAAAAAATCAATTATTTATTTAT # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.69%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [41.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 591-28 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACQL01000089.1 Actinobacillus minor NM305 Contig_168d, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 590 35 91.7 30 A..A....-........................... GACCAAAGCGAACTTTGGTCTAACTCACTA 525 36 100.0 30 .................................... CAAGATGAGGCTTTTTCTCCTACATCGCCA 459 36 100.0 30 .................................... AAAGGCTCTAAAAGCTCTTTATAATCTACT 393 36 100.0 30 .................................... ATTGGTGTAGGTGCTTAGCTTCCTCAAGGG 327 36 100.0 30 .................................... ATTAACTAACCGCTTACTTGTAACAATGTA 261 36 100.0 30 .................................... GCAGTAAGTTATTTAGACAAGCCCCAAAAA 195 36 100.0 30 .................................... AAAATTTGCATTTTTTGGTTTAAAAATGAG 129 36 100.0 30 .................................... TCAAGATATTAAATTAGTGGCTAACACTTG 63 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 99.1 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : ATTCGGCGCCATATCAGACATCACAACGTCCACCATATCATCGCCAACACGTTCTAATAACGCATTTAAAACGCTTTCTTCACGGAAGTCCCCTTGCAAAAAATCAACACCAACAATCGGGTTCATATCCAAAATATCACAGGCAATAATACGCCCTTTGCTTCCAATCTGCGTAACTGCATATTGTGACCAACCACCCGGTGCAGCTCCAAGATCTACCACCGTCATCCCCGGTTTAAATAAGCGATCTGTTTGTTGAATTTCATCTAACTTAAAATATGCTCTTGAGCGCAACTTTTGCTTATGCGCTTTTTGAACAAACTGATCTTTAAAATGCTCTGCCAACCAACGAGACGAGCTGGCACTCCGTTTTCTACCCATTTTCTCTCAAAAAATATTAACAATTACAACTGAATTTCTTAGTTTACCATAATAAGGGCAAATTATCGCTATTCAAGTCAATTCATTAGATTTTTGTGATAGTTTTTTCCATTAAATAA # Right flank : TCCTATACGTCCTCGTACAACTGCGGGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [18.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.77 Confidence: HIGH] # Array family : NA // Array 1 71371-71071 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACQL01000087.1 Actinobacillus minor NM305 Contig_168b, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 71370 36 100.0 30 .................................... CTTTTATTATTATAAATACTTAATATATAT 71304 36 100.0 30 .................................... TAAAATAGGAGTAACAGCTTATGGCTAATC 71238 36 100.0 30 .................................... GATAGCGGGCAATTCACACCGGACCACAGC 71172 36 100.0 30 .................................... AATAATAAACGGCTTGATCTATTTACTCAA 71106 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 100.0 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : TTTCTCATTTCGCAGTGCTACAATAAAGAAAAACGGCATAGACTTTGACATCT # Right flank : ACCTATGCTCCAAAGCCTTATCCAGAAAGGCTTTGGAGCATTTTATTTATATAAAAAACAAGTAATTTTCTCTCAACAAGCGGTTGGTTTAGTGAAATTTTTTTGCAAAAAACGGTGGTAAAAAATCGTCCATAATTTACACCAAAGTGATTTTTAGACATAAATTTAGAAAAAATACTGTTCATTAAACAAGCGTTTAAACAATACTTTTGTTTAAAATAAAAGCAATTAAACTGTTATATAATTTTCAGTATTTCAATATTTTTTATTAAAAAAGTAGCATTTGGTTTGCATTAACTTTTTTCTCTTGAACTTTCAACTCTCCTAATAAAATCTGCATACTAGCAAACTGTTTTTCGGTAACTTCTAAGCAACGAATTGAGCCTTCTTCTGGCAGGTGTTCACAAAGTCTTTTATGGTGCTTATCTAACGCATCTCGTCCTCGAACAATGCGGGCATACACTGAAAGCTGTAACATTTGGTAGCCATCTTTTAATAAA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA //