Array 1 78313-76108 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNDL01000008.1 Parabacteroides merdae strain BIOML-A3 scaffold8_size181901, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 78312 32 100.0 33 ................................ GTACGGTTTTATCATCCAATCTTGTAGGCTATA 78247 32 100.0 34 ................................ AGGGTGCGCGCGTCTATTGTCAAAGGTAAACGGA 78181 32 100.0 33 ................................ AGAAAAACAACAACAACTCCACTCAAAGTAGTG 78116 32 100.0 34 ................................ TTGTGACTATGTATGCTAAAGTCAATAATATTGA 78050 32 100.0 35 ................................ TGACGGTTCTATTTCTGTATTTTGCGACGAGGAAA 77983 32 100.0 33 ................................ ACTATTTGAGCAATGTGCCCAACAGTTATATCG 77918 32 100.0 34 ................................ TGAAACTTGGTCTCGTACAGCTAATCTCGACGCC 77852 32 100.0 33 ................................ ACTATTTGAGCAATGTGCCCAACAGTTATATCG 77787 32 100.0 33 ................................ AAGAAAAAACAAACTCCTGCGCCCGTTGGTGAT 77722 32 100.0 35 ................................ CGGCAAGAAATAACTCGCTAATCGCCGTTAGGCGT 77655 32 100.0 34 ................................ AAGAAAAAACAAACTCCTGCGCCCGTTGGTGATA 77589 32 100.0 34 ................................ CAAGTTGACGAAAACGGTAAACGCATACCTTATT 77523 32 100.0 34 ................................ CCTAATATGGGTATCAATAAGGATGATCCTTTTA 77457 32 100.0 34 ................................ AGGCTTAATGCGAATAGAACTATTGGGTGGCACT 77391 32 100.0 33 ................................ TACGAGAATGGAATATGCCCTGACTATTGATGC 77326 32 100.0 34 ................................ AACATGCGTCTTAACAAAAGATTCTTTCCAAATA 77260 32 100.0 34 ................................ ATCAACCTGGTAATAAGACCACGCCTTTTGTATA 77194 32 100.0 33 ................................ AAGAACACAGTCTGACTTTTATAAGGTTCAGAT 77129 32 100.0 36 ................................ AGATAGGTACGGCTCAAATGATAATGAAGGAACATG 77061 32 100.0 33 ................................ GGTGTTATTTTGAACGATAACATACAAATGAAA 76996 32 100.0 33 ................................ AAATCCTGTTTCTTTATCTGACACACAGGCGAC 76931 32 100.0 35 ................................ TATTGGAGCCGGTAGACGCCAAAAGCGCGCCATTG 76864 32 100.0 33 ................................ CTGTTTGTCTCTTACTCCTTATTCCCAATTCAT 76799 32 100.0 35 ................................ ACGAATATAAATACGATCAAAGCCCAAGGCCTTTT 76732 32 100.0 34 ................................ ATGGAAAAGAGTAGGGAGGTCGAAAGCGTGATAT 76666 32 100.0 34 ................................ AGGAACGGGTAAACATACTTGAATATGCCGCTTT 76600 32 100.0 33 ................................ TTTGAATTTACCCCCTTTAGAGGATATGGAAGC 76535 32 100.0 36 ................................ TTATATTGTACATCTATTGCCATCAAATGAATCATT 76467 32 100.0 34 ................................ AAGGTCAAAACGCTTATTATTAAGTATAGCGGTA 76401 32 100.0 32 ................................ TGACGGTAATTTAAAGGACGGTCTTACCGTTT 76337 32 100.0 34 ................................ CGTTATATGTTTTATAACATATAGTCGGTTGTTG 76271 32 100.0 34 ................................ AATGGACGAGCCGTTGAAAGAGCTGTCATACTTG 76205 32 100.0 34 ................................ AGTTGACAACCGGTACGCGTGTCCTTCGGAGTCT 76139 32 84.4 0 .......................C....GCCA | ========== ====== ====== ====== ================================ ==================================== ================== 34 32 99.5 34 GTCGTACCTTATATAGGTACGTGGATTGAAAC # Left flank : TTTAGATAATTATCCGGTCTTTTTAATGAAGTAAGTTCATGTATGTTCTAGTTACATATGACGTAGAAACGATGACTTCCGACGGACAGCGCAGGTTACGTCAGGTAGCACGTCAATGCCTGAATTATGGCCAACGCGTCCAAAATTCCGTTTTTGAATGCTCTGTCTCGCCTGCTCAATTTACCGAGTTAAGATTAAAACTATCGGATATCATCGATCATAAAAAAGATAGTATTCGTTTCTATTTCTTGGGAAATAATTATTCTAAAAGAGTTGAATACATAGGTGTCGTCACATCCTATAATGTAGAAGATGAACTTATAATATAACTGTTTGCGAACATTAAGCATTAACAAAAAGCTGGAGTTTTCGCAATCATTGATTATTAGCCTATTAAACACTCCTATTAGTTTTATTTCATCAATAAAAAATCCAAAAAGTTTATTATCGCATAAATGCATTGATAACAGACTGTAAATGTTTGCATTATTTGTAATGCA # Right flank : GAAGTTGATACACGTGTCATAGCCGTCGCACCCGTAAAGGATGCGACGGTAATGTTATTGTTGTAATTCAGACACATTTCAATCCAAACGCACTATTATAACCAACTCAATCTGTAACACCTATCACATCAACAGTAGTTCCTCTACCCAAGCACCGTCCAAAACCAATCCGGCCCGTTCATCATAACACCTTCCATCTTCCAATATAAAAATCCCAGCATACACTCCCACTGTTCCCTGTTTACATAACTGTTCGAAATCCCATTTTCTAATGGATACGCTATACTGCTGTAGCTTACGTAACAACCAAAATTCCGGGCCAATCCGCTTCAGTTCCTCCAGTAAGGTTGCACCATCACCATAGCCGACCAAGATGGATACCGAGTCTTTATCGTCTATCAACCGGAACTTCTCTGCAGCAGTTGCAAACATAAAGTGCATTTCTGCAAAACCTTTATATAACAGACCTTTTATATTAGCCTTATCAAAGGTGTTACAAT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTACCTTATATAGGTACGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 86069-83993 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNDL01000008.1 Parabacteroides merdae strain BIOML-A3 scaffold8_size181901, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 86068 32 100.0 35 ................................ CGGCACCGGTGGCGGTGCTCTTTTAAATGCCGGTG 86001 32 100.0 34 ................................ AAAACTGCGGAACATAATAAAATTACGAAGCGAA 85935 32 100.0 35 ................................ GTAAGTAGTCAAACCAACAAGAGGCGCAACACCTT 85868 32 100.0 33 ................................ CTTGCTCCCTAAATGGTTGACATATCGTGAGCG 85803 32 100.0 33 ................................ TTGGATTCAGGGTAAAAACGATCTGTTTAAACG 85738 32 100.0 33 ................................ ATCTTAGTCTGAATCGGAAACATCATAGGCATA 85673 32 100.0 34 ................................ TTTAGCATAAATAGGTTGATACCCAATGTGGTCA 85607 32 100.0 34 ................................ TTATTTTCGTAGCCGAGAACAGTATTTAAAAACT 85541 32 100.0 33 ................................ GGGCTTAATACGTATAGAACTATTAGGCGGTAC 85476 32 100.0 33 ................................ GGATTTACCAGTATATGCAGGAACAAGAGGAAC 85411 32 100.0 34 ................................ AGGATTATAAGTGAGTGTAATAAAAAGAGGCGCA 85345 32 100.0 34 ................................ TTTTTTCGAAGTATCAGCCTTAATATTTTTTGTC 85279 32 100.0 35 ................................ TTAAGGCGCAGATTTCTGAAACTTGGTCTCGTACA 85212 32 100.0 34 ................................ CGGTGCTGGTGGCGCATCTCTTTTAAATGCTGGC 85146 32 100.0 32 ................................ CAAGTCCTGGCGGCATTGCGAAAAAACTCTTA 85082 32 100.0 34 ................................ AAAATCAACTTTATACGCATTGCCGTCCTCATCA 85016 32 100.0 34 ................................ TGGTTTGTCTGTTACACCCTCTGATATTGAGCGT 84950 32 100.0 33 ................................ ATTAATATCATTAATTTCGGATATCAACTTACT 84885 32 100.0 33 ................................ CGTATTAAATGGATGGGCTCTTTAAATATAGAA 84820 32 100.0 35 ................................ AATAATTTCCTTGTACGAAAAACCTCGGAATTGAT 84753 32 100.0 34 ................................ ATCCTTTCGAGCACGGATATAAGCAGAACCAATA 84687 32 100.0 35 ................................ GTACCAAGGACGCTGATAACCAAACACCGTATTTA 84620 32 100.0 35 ................................ ATCAACTTGGAAGTAAGACCATGCTTTTTGTATAA 84553 32 100.0 33 ................................ ATCCCTTCGAGCACGAATGTAGGCAGAACCAAT 84488 32 100.0 33 ................................ CATAGCGGTAGGAGTAGCCATAATGGGACCGGC 84423 32 100.0 34 ................................ CAAAGAGTACGCAAAGGAACTTTATAGAAAGACA 84357 32 100.0 34 ................................ AAATAGAATCTGATGGCTGACGGAATGAGCATAC 84291 32 100.0 35 ................................ GTCAATTTGAAAATAAGACCAGGCTTTTTGTATAA 84224 32 100.0 32 ................................ TTGCGAGAGCGCAGGAGTTTTTTCGCAATGCC 84160 32 100.0 33 ................................ TTACCAGAGTGCAGGAGTTTTTTCGCAATGCCA 84095 32 100.0 39 ................................ GTCCGTTTTAGAATACAACAGTAATAATGCAACTAATAA 84024 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 32 32 100.0 34 GTCGCATCTTTTACAGATGCGTGGATTGAAAC # Left flank : TACTTCCAGGAGATCCCGTCTCCCCAGAGCCTGTGAAGTCATCCCACTCGTTCCCATCCGCAAGAAACCGAACAACCAGTAAATAATATTGAACAGCATCCCCCCTACCGCAATCGCCCCGATATAGGAAGCGGCCCCCAAATGTCCGACAATCGCCACATCGACCAATCCCAACAAAGGAACCGTTATATTGGATACAATAGAAGGAAGCGCTAACTGAAGTATCTTTTTATTCATTATTTATCGTATCTATAAAAACTATTCCTAACTTTGTCAGCAAAGTTACAGATTACTTTAGAAATAACATGATTACACTTATGTTTCAATAACAAAAACGCGAACCCTAAGTAATTGTAAAAAACGTTGGATGTTCGCATCCTCTATAAATCATACACTTATAGATTTATTTAGAGAATATGAACATTTATTGCTTTTCTACTTTATCATTCGCAAAATTACAATTTAAAAGTGTCATCAATAAAGCTTTTCACAAACATGGA # Right flank : CACTCTTCAAAGGCGCGTTTGAACGTGTCTTTAATGTCGCATCCTTTACGGGGACAACTATTTATAATATTTTTTGCAAGAAGATTACAGGATTAAAATATTTGTTTGTTAGAAAATAAAATATATCTTTGTTGAACAGAGTTATAAAGATACCTTATTACTCAAAGCATAAACACCTTATATTACGTTAACCTAAACATATGATATATACAAATAAAGAATACTGTCTTGAGGTTAAAGGAAGCATGGCCTGCTTTACCCGTCCGGAGATGAAAGTCGAAAGAGTTAGCTACGACATAATAACGCCATCTGCTGCCCGAGCTATTTTCGAATCTATATTTTGGAAACCAGCCATACAATGGAATATTACTCGAATAGAAGTATTAAATCCAATCAGATGGTTTTCCATGAAAAGAAATGAGATTGGAAGTTTAATGAGCCCCCGTTCATCCGGATTATTCATCGAAGATAATCGGCAACAAAAATCCAGTTTGTTACTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCTTTTACAGATGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-1.50,-1.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //