Array 1 3115512-3113795 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KK327850.1 Mycobacterium tuberculosis TKK_02_0075 addxJ-supercont1.1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                          	Insertion/Deletion
==========	======	======	======	====================================	=========================================	==================
   3115511	    36	 100.0	    38	....................................	TTAAAACCGTGTTGCACTGCAACCCGGAATTCTTGCAC   	
   3115437	    36	 100.0	    41	....................................	CATAGAGGGTCGCCGGCTCTGGATCACGCTCCCCTAGTCGT	
   3115360	    36	 100.0	    36	....................................	TTTTTGCCTCATGCTTGGGCGACAGCTTTTGACCAA     	
   3115288	    36	 100.0	    34	....................................	TCGCAAGCGCCGTGCTTCCAGTGATCGCCTTCTA       	
   3115218	    36	 100.0	    39	....................................	AACACCTCAGTAGCACGTCATACGCCGACCAATCATCAG  	
   3115143	    36	 100.0	    35	....................................	TTTTCTGACCACTTGTGCGGGATTAGCGGGCTTAG      	
   3115072	    36	 100.0	    37	....................................	ACCAATGCGTCGTCATTTCCGGCTTCAATTTCAGCCT    	
   3114999	    36	 100.0	    38	....................................	CTGAGGAGAGCGAGTACTCGGGGCTGCCGTCTGCGCTG   	
   3114925	    36	 100.0	    37	....................................	GCGTGAAACCGCCCCCAGCCTCGCCGGGGCCGCCTAG    	
   3114852	    36	 100.0	    35	....................................	ACTCGGAATCCCATGTGCTGACAGCGGATTCGCAT      	
   3114781	    36	 100.0	    37	....................................	CGGGCAGCGTTCGACACCCGCTCTAGTTGACTTCCGG    	
   3114708	    36	 100.0	    41	....................................	CAGGTGAGCAACGGCGGCGGCAACCTGGCGGCCACGGGTCG	
   3114631	    36	 100.0	    40	....................................	ATGGGATATCTGCTGCCCGCCCGGGGAGATGCTGTCCGAG 	
   3114555	    36	 100.0	    36	....................................	TTCGTCGACCATCATTGCCATTCCCTCTCCCCACGT     	
   3114483	    36	 100.0	    41	....................................	TTGCGCCAACCCTTTCGGTGTGATGCGGATGGTCGGCTCGG	
   3114406	    36	 100.0	    24	....................................	CTTGAATAACGCGCAGTGAATTTC                 	Deletion [3114347]
   3114346	    36	  94.4	    36	.CG.................................	ATTCGCACGAGTTCCCGTCAGCGTCGTAAATCGCCA     	A [3114342]
   3114273	    36	 100.0	    37	....................................	CCGGCAACAATCGCGCCGGCCCGCGCGGATGACTCCG    	
   3114200	    36	 100.0	    36	....................................	CGCATGGACCCGGGCGAGCTGCAGATGGTCCGGGAG     	
   3114128	    36	 100.0	    36	....................................	TGGATTGCGCTAACTGGCTTGGCGCTGATCCTGGTG     	
   3114056	    36	 100.0	    41	....................................	TCCACATCGATTTCCTTGACCTCGCCAGGAGAGAAGATCAC	
   3113979	    36	  97.2	    40	.........................A..........	TCGTCGACGATCGCGTCGATGTCGATGTCCCAATCGTCGA 	
   3113903	    36	 100.0	    37	....................................	TTGGAGCGTGTCACCGCAGACGGCACGATTGAGACAA    	
   3113830	    36	 100.0	     0	....................................	|                                        	
==========	======	======	======	====================================	=========================================	==================
        24	    36	  99.6	    37	GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC	                                         	       

# Left flank :   TTCAGTACGCCCTCGACTTGCAACTGCAAAGCCTCGTGCGTGTTATCGAAGCCGGGCACCCGTCGCGGCTCGTCGATATCGATATCACCTCCGAGCCATCCGGAGCCTAAATGCCCACTCGCAGCCGTGAGGAGTACTTCAATCTCCCGCTCAAAGTGGACGAGTCCAGCGGCACTATAGGCAAGATGTTCGTCCTCGTAATATACGACATCAGCGACAACCGGCGGCGGGCTTCACTTGCGAAGATCCTGGCCGGGTTTGGCTATCGCGTCCAAGAGTCCGCATTCGAAGCGATGCTGACGAAGGGCCAGCTCGCGAAACTAGTTGCACGTATCGACCGCTTCGCCATCGACTGCGACAACATCCGGATCTATAAGATAAGAGGTGTTGCGGCAGTTACGTTCTACGGAAGGGGACGGCTTGTCAGCGCAGAGGAGTTTGTGTTCTTTTGACATCATCAGCAGGCATTGTTACCACACGCTGGACGAATTGTCCATAGA
# Right flank :  CCTCAGCTCAGCATCGCTGATGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,12] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.40,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [15.0-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,1.42   Confidence: HIGH] 

# Array family : NA
//