Array 1 57175-55978 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMYF01000020.1 Mongoliitalea lutea strain KCTC 23224 sequence20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================================================================================================================== ================== 57174 36 100.0 30 .................................... TTAGCGGGGCCGATTGGTATTGCAGCGGCT 57108 36 100.0 30 .................................... AACGTACTTTGAATTTGTGTCAGTAATCGA 57042 36 100.0 30 .................................... ATAGCAAAATAGTAGATTTTTTGCCTTGTT 56976 36 100.0 30 .................................... TAGCGATTTGATTATTTCCATCGCTACTTG 56910 36 100.0 30 .................................... ACACGAGGCACGGCGGAGCGTGTGAAGACA 56844 36 100.0 30 .................................... TAAATGACTATGAATATTAAACCTATCAGA 56778 36 100.0 31 .................................... CCCGGCATGGAGGCTACGTGAAAATGAAGGC 56711 36 100.0 30 .................................... AAGGTATTGCCACTGATTTTGAGTGGTGGA 56645 36 100.0 30 .................................... GTCTTTGATTTCATTTTTCAGGTTATTGTC 56579 36 100.0 30 .................................... AATCCATCCGGCTCTAGGTTGTGCCGATTT 56513 36 100.0 30 .................................... ATAGTCACTAGTAGTAACCATAATCCAAAT 56447 36 100.0 30 .................................... GCCCAACTTCTTGGATAGTTTTCTTGAAAG 56381 36 100.0 30 .................................... TCTTAACTAATGGTTAGGCGTTGTGAAAAA 56315 36 100.0 29 .................................... TTGATGCTGTTTCTTCAATTATTACTGCT 56250 36 100.0 30 .................................... GTAGCTCTCGCGAGTTGCTTTGGCCTCGTT 56184 35 86.1 136 .........................A.G.-.TG... GGTGCTTTAGCAAAATTGCGATTGAGCAATTTAGAGAAGGAACTGGCAAACCCTTTTGCCAGCTAGTACAGTCGTTCTTGAAAGTGATTTGAAGGGTAAACACAACGGCAACCAATCAGGGTTTCTAACCCAAGAA 56013 36 94.4 0 ................A.............A..... | ========== ====== ====== ====== ==================================== ======================================================================================================================================== ================== 17 36 98.9 37 GTTGTAACTGCCTTTTGTTTGAAGGGTAAACACAAC # Left flank : GATACGTTTAAACCTAAAAATAGAATTGTTATCAATGAAATACCGACGCTTGAGTCGTATTTTGTTGGAAGTAAAATAAGAAACACAGCATTTCACTTTAACTTACCATTAGAGGAAACCTACAAACAAGCGTTTTTGAAGATTGAAGAGCAGTTTATAGCAAGTGAGGTAAAAGCTAATAATTATAAAACCTTGGATAATTGTCCCTCTATGCTAAAGCGAACTATTAAGTCATTTATTGGACAAATGCATGAAGAGGCCAAAATGAACTTTCATCCCAAAATGACTGATAAGCAAAAAGTAATTGAAAGGAAAAAGGCTGAAGATAAAATGTTTGAAGATTTAATTAAATAGATATTTAAATAAAACCGCTCTTTGACATCATGAAGCTTACAATCCAAAAAATGACAATTTTCGTAACAAAATAGAAGAGATTTGCCTGTTTTTAATTGCTGAAAATGGGCTTTACCCTATCATTATTAATGCTTTACAACTATTAT # Right flank : TTAATCATACCCAGTGTAATTATGGGTATTTTGTAGCAATACTTGATTGAATCGCAAAAAAACTATTCTTTTAGACTAATTGTGATTATAAAAATTAGTGACAAAAAAAAGACCGACAGAAATTTGTCGGTCTTTTTGTATCTATAAATTCTTTACTTCCCATAAATCTCTTCCAACACCTGTGCTAATCGGATTCCTCCGGCCATCAGGCGCTCTTCCACATGGTGATAATGCTTGTAGATGTATTCATAGCCAATTCTATTATTGGCAGGGATATCGTACATCGCTGGACGGATGGCCACAGCTTCTTTCAACCAGTCCAAAGGAGTTGCTGCTTGGTAACGCTTCAATACGTCTCCGTTGATTCTCTTTTGAAGTTCGGTGGCGATTTCGGTGTAGCTCATTTTTTTGTTTTCGATCAAGTCTGAATCCCAAACCGCATGTATATTCGTTTCTTTATTGAAATAACTTACTTTGACATCGTTTCCACCTCTATCGCC # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.58, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTGCCTTTTGTTTGAAGGGTAAACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 662-7711 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMYF01000040.1 Mongoliitalea lutea strain KCTC 23224 sequence40, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================================================================== ================== 662 30 100.0 35 .............................. AAAAGCATTGGTTACTGATTGCTGTTTACCTTATT 727 30 100.0 36 .............................. AGTTCTTTCCACACCTCTTTCACTTTGGCCCTCCCG 793 30 100.0 36 .............................. CAGTTCTATTTGCAGATACAAGGCTTGAAATACCAC 859 30 100.0 36 .............................. TTGCCTATTCTACAGGCACCAAAGCGGCTTATAGCG 925 30 100.0 36 .............................. TAAGTCAATCCAATCAGAAATAGCGTGTATCTGTCG 991 30 100.0 36 .............................. ATGCCACCGGCACTTGTATATAAGGCAATATGGCAT 1057 30 100.0 36 .............................. CAGCGAGTGAGGATACTATCTCTGATTTGAATGCGC 1123 30 100.0 36 .............................. TCTGCTGATTGGCAGGCCTTCCGGGTAATCTTCCAA 1189 30 100.0 35 .............................. GTGTAATACTTGAACTTAGCAGTAGACTCATCATA 1254 30 100.0 35 .............................. TTGAATACATGGTTAACAGAGTAAACCCTCTCACG 1319 30 100.0 36 .............................. CTAAAAACGAAAAAGAGCATAGGTTTTACTCTCTTT 1385 30 100.0 35 .............................. TTAACTACTCCACAGGTCGAGGCGATGAAGCAAAA 1450 30 100.0 36 .............................. AACGCTGAAACAGTAGCGATTGAAGCTAAGAATGCA 1516 30 100.0 35 .............................. CCTCATCCATGCCTTACGGTGATCGTGGTCAGTGG 1581 30 100.0 36 .............................. TATCCTTCAGATTTGGGATACTGATGGATATCTTTT 1647 30 100.0 36 .............................. CCCTTGAAGAATGACTCAAAGCGATCTACCTCCAAG 1713 30 100.0 35 .............................. AAAATAGGTTTGAATCTCACGATCGATGAAGCAAA 1778 30 100.0 36 .............................. GTTGGTAGTAGGTGATAGACGATATGCAGCCATCTA 1844 30 100.0 37 .............................. CTGTCAAGATGCCTGACTAACCAGACGATGTTAGCAA 1911 30 100.0 36 .............................. TTGAAAATCATGGGGGATTTCAAAGCAGGAACGCAA 1977 30 100.0 35 .............................. ATAAAAACAGCCGCTAACATCGCATTCCCACAAGG 2042 30 100.0 36 .............................. CTCGCTGTGATCAAGTCTTGACTTGCGGTAAGCTGG 2108 30 100.0 36 .............................. CTGGTAATAGTGGATCATCATTTCTAAACAAGGCAT 2174 30 100.0 36 .............................. CTTGTTAAGCTATACGGCTTCAAAAATGAAAATTCA 2240 30 100.0 36 .............................. TTCCAAAGATTGATTAAGCATTGTAAATCATTTGTT 2306 30 100.0 36 .............................. TTTGAGATGGCGTTATTAGCAGATTCATTAATCGAA 2372 30 100.0 36 .............................. GGAAAAGAAGCTTATATCACGATCGCTAATCAAAAA 2438 30 100.0 36 .............................. ACGGAGTAGTTAAGATCTTCCCGACCATGGTCAAAA 2504 30 100.0 36 .............................. AGATTAATCCTGCTTTAAGTGCAAAATATTACCTAG 2570 30 100.0 36 .............................. GAGATGCCCGTGATCTTTTTGGCTACGGAGAAGAAA 2636 30 100.0 36 .............................. AGAGCATTGTCGGTTAATAAAATTGCATCTGACGAA 2702 30 100.0 36 .............................. AGATTAATCCTGCTTTAAGTGCAAAATATTACCTAG 2768 30 100.0 36 .............................. ATGGCTTACGAGAAAATGTTCCATCACTGTAGGAGT 2834 30 100.0 36 .............................. ATACTTACCACACAGAGGAAGGAGAAGTGCTAGAAG 2900 30 100.0 36 .............................. ATACATCCCAAAGGTCATTTCCTAAGATAGGCTTGA 2966 30 100.0 36 .............................. AGTACCATATTGAATACCCTTTGGAGTACTTCGAAT 3032 30 100.0 35 .............................. TTGACTGACTGGAAGACAATGTTTTTAAAACCAAA 3097 30 100.0 36 .............................. GGAGTTAGAGGAGTCTATTTCTTTAACGAATAGACT 3163 30 100.0 35 .............................. ATGTTAAATGCTGTTTCAAAAAAACCTCCTTGAGA 3228 30 100.0 35 .............................. ATATCCTTTTTCGCTTTTCTACGTGCTGCCTTTTT 3293 30 100.0 36 .............................. TCGCAATAGTCGCAATTATAGCGGTTATTCTAGGAA 3359 30 100.0 36 .............................. AAATATTCTTCACTCTCAAATAACCCTGAATGAAAA 3425 30 100.0 35 .............................. ATTAATTGAGGAAGAAAAGATTAAAAGGTTAACCA 3490 30 100.0 35 .............................. ATAGGAATCGAGGTTATACCAGTACAATTAATAAA 3555 30 100.0 36 .............................. TTAACAGAACCGTTCTTTTTAGACCTTACAGCCATT 3621 30 100.0 35 .............................. TTTGCAGGAGTGATCAATCCAAGGTTATTATCCGG 3686 30 100.0 36 .............................. TCGCCTACCGGATAGCGATGCACCAAATCCCCCCAA 3752 30 100.0 36 .............................. CACTTTCGGAGGCGCTTCCATTTGGATTGGATGTGT 3818 30 100.0 36 .............................. AAAATTATAAGGGAAGCCATGCCATTGAATCCCCCA 3884 30 100.0 36 .............................. TGGAAATAGATTGTGCTACTAGTTAGCTCCAATCTG 3950 30 100.0 36 .............................. ATCGGTGAAGCAATTGGAAGCGGCGGGGATATTATA 4016 30 100.0 36 .............................. ATGGCATAGCAACGATAATGGCTATGAGCTTGCCAA 4082 30 100.0 36 .............................. CTACCCAACTCGATAGCGTTATTTGCATCTGTCGAA 4148 30 100.0 36 .............................. TTAAACCTAGTCGTTGATTGAACCATTATTTGTGCT 4214 30 100.0 36 .............................. TGGATAGAAGGATTACCAAAAGTATGTAGAGGCCGA 4280 30 100.0 36 .............................. GAGTTTGATGTTACCGAGTGGCATTCTTAGGGTTGA 4346 30 100.0 30 .............................. AAAAGTAATAAATTACGATAAAAGTAAAAA 4406 30 100.0 36 .............................. GTGCTTCCATCACCCCAGTCAATGTTGCTAGTTGTG 4472 30 100.0 35 .............................. TTTAATTTAGCTCGTAGGCGATCATATTCGGCTGT 4537 30 100.0 35 .............................. ATATCATCCTCATGCGCAAACCAAAATCGGTCGAG 4602 30 100.0 36 .............................. ACTGCTACCTCGAGGACATGATGATGGACCATGCAA 4668 30 100.0 36 .............................. ATCAGATCAATGCCGCTGACTTCACCCCGACGCCTG 4734 30 100.0 36 .............................. GAAGTTGTCAGTTCGGGCATAGGTAACCAATCGGGA 4800 30 100.0 36 .............................. ATCAAGTACATTTGTTGGTCAAATGCACAAAAAACA 4866 30 100.0 36 .............................. ATTATATCGCTATTCCTATCGCCATATTCCAGTCTA 4932 30 100.0 36 .............................. ATTTGATAGAACGCAAAAAGCCGCTTTAGATTTAGC 4998 30 100.0 35 .............................. TTAACTATATCCGAGGTCTCAACTGTAACGTTAAC 5063 30 100.0 35 .............................. ATATCGCCTACCTCGTTTACAGGTAACCCGCCTAA 5128 30 100.0 36 .............................. ACGGTTCAAACCTGAAAGACCTTTCCAAATCCAAGA 5194 30 100.0 36 .............................. ATGATCCAAATAAGGCTCCCCAACTCGAATTCGCAC 5260 30 100.0 36 .............................. ATCGGTGAGGCTATCGGGAGCGGTGGCGATATTATA 5326 30 100.0 36 .............................. TTGGATTTCAATCATTGATACCTCGGTTTCACTCGT 5392 30 100.0 36 .............................. TTTTTTCTACTGAGACGGATCCACCATCATTGAACT 5458 30 100.0 36 .............................. ATGTAGGAATTAATGAAATAGCCCCACCTACTGCAA 5524 30 100.0 35 .............................. ACGGTTCAAATTTGAAAGACCTATCTAAATCTAAG 5589 30 100.0 36 .............................. ATAATTGAGCTGTGACTTTTTGCAAAATTTCTTCAT 5655 30 100.0 35 .............................. TTAGATCCACCCCTTATGAGTTGAGGCCTATCAAA 5720 30 100.0 35 .............................. TGGTTATTTGATATTCATGCGAAAGCCTTTCCATA 5785 30 100.0 36 .............................. AAGGAAATTGTGTTTCAAATGGGATATTAACAAACA 5851 30 100.0 36 .............................. CTTATCAACCAATCCAAACAACTACGAAATGAGAGG 5917 30 100.0 36 .............................. ATGATTCGTGCAATTGCTCCTTTTTGATGCGGCCTA 5983 30 100.0 36 .............................. CTAATTCTATGTCTTCCAAATTTGCGAAGTAATGCG 6049 30 100.0 36 .............................. AGCATGTACACTTTCTTACGATCACCAGTGGCAATC 6115 30 100.0 36 .............................. AAAGATGCCAATATAATGCAATACCCATTCCAAAAG 6181 30 100.0 36 .............................. TTTCTTGTCCTGTTCTGTTTTGTGATTGATAAAATT 6247 30 100.0 35 .............................. ATGATTACCCGAAGGTAGAGCAGCACAGTACCATC 6312 30 100.0 36 .............................. AACCATACCACTGCATTTCTGAACTGGGCAAATGTT 6378 30 100.0 36 .............................. TGCTCTTTGACGGGATGCAGACCGACAGCTTGGGCA 6444 30 100.0 36 .............................. AGTTTAGAACCTAACATATTCCTTAATTCTAATCTC 6510 30 100.0 36 .............................. AACTTATAGTAATCCTGCCAGTCCTCTAGCTTGGCA 6576 30 100.0 36 .............................. TTTTCTTAGTCGAGATGCTCAACTGGTTTCCTGAGG 6642 30 100.0 36 .............................. TTATTCTCAGGATTAGTGATCCTTAGGCCTGCTAGG 6708 30 100.0 36 .............................. CGCTTTCTTTCGATGGTAAAATTCAAAAAATGGTAA 6774 30 100.0 36 .............................. AGTTTAGAACCTAACATATTCCTTAATTCTAATCTC 6840 30 100.0 36 .............................. AGACTGACATGATCAAGGAACGGATCAGTTCCACCA 6906 30 100.0 36 .............................. TTTCCTCAGCCATCAGATTAAGCGCATAATTGGAAG 6972 30 100.0 36 .............................. AAGTTTAACATCCCAGGATATCCTGTTAAAACTGCC 7038 30 100.0 36 .............................. ATAAGACGTGACGAGCTTCACCTAAACTACTCTCAA 7104 30 100.0 36 .............................. TAGGCAAGAAGCCACCGAAGGGATTTGTGCATCCTT 7170 30 100.0 36 .............................. ATTTACAAAGCGTACAAAGTTTGTACGCTAAAACGT 7236 30 100.0 36 .............................. AGTGCATCCCAATCATCAGCGGTCTTGCCTGTATCA 7302 30 100.0 35 .............................. CTTGTTTGACGGAGGAAGTGAAGAACTTTCTGATT 7367 30 100.0 36 .............................. ATGGAAAGGTTAATTACGCATGGTTCTAAGCTTGCA 7433 30 100.0 35 .............................. CGGTTATTGAACACTGAAAAAGCGTTGACGGCATT 7498 30 100.0 36 .............................. TAAGCAAAAGCATCTGCTCTCCTAACTACATTCAGA 7564 30 90.0 86 ..........................G.CC GAACGTTAAAAAAACCTTCTGTGAAGGTTTTTAGTGAGGGGCCAGACTGTAGGGCAGGATTATCCCAATGCGGAAACTTAACTTCT A [7589] 7681 30 80.0 0 ....T..C....T......A.....A...A | T [7683] ========== ====== ====== ====== ============================== ====================================================================================== ================== 107 30 99.7 36 CCCTCAATCGCACCATACAGGAATTGAAAT # Left flank : TTCAGTAATTCTTTAATTCAATAATTCAACCATGTACATCATTCTAGTTTACGATATCGGAGAAAAGCGAGTTGGCAAGATGCTGAAACTTTGCAGAAAATACTTGAACTGGATTCAGAATTCAGTATTTGAAGGAGAAATTACAGAGGTGAAATACAAAGAGTTAATTATCAACGCAAAAAAAATCATGAAAATCGAAGAAGATAGCTTAATTGTATTTAAAAGTAGGGAAGAAAAGTGGCTGGATAAGGAAGTTATTGGTCAGGAAAAAAATGATTTGGATACTTTTCTTTAGTTGTCGAAGGTAGCAAAAAAGAAAAAAGGTCAAATCCTCATGACCTAATATACTGATAAAGTACTGACGAACAACATATTAAAAAATTGTCGAAGCTAGGGATAAAATAGAGCATTTAAGATCGACGCATTTTCACCAATAAATTAATCATCTAAAACAGCCAGATTGATTCAAAAAGGCCTATTTTAGTATTCCGTTTCGACGA # Right flank : ATTCTTCGTACCCCCCTCTTCTCAAAATCTGCAATTTCGGGAAACAGATAAACGGAGATTTGCAATCTCCTAAGGAAAACCGTCTTGTTAAGCCAAAAATTCTTAAACTTTAAAAAGGTTAGCCTAGAGGATTACAAATCCTCATGTATCTACGGACTTAGATTACAAATCTGGGTCAGCACTTATACAAAAACACCATCTTAGCATCCAATGCGACCCAATTCCGGATCGGTTGGTAAGTCCGGTAATTACTCTTTGCTACAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTCAATCGCACCATACAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //