Array 1 1395941-1396091 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHEF010000012.1 Streptomyces sp. COG19 ctg.s1.000000F_arrow, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1395941 29 100.0 32 ............................. GGCGGCTGGTGGTAGGTGCGGCCGAGACTGTC 1396002 29 100.0 32 ............................. CGGTCGACTCCGATGCGCTCTGCGAGGCCGTA 1396063 29 96.6 0 ........................A.... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GTCGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : CACCGCAGGCCTCCCCGCCGAGATCAACTCCCCCGTCGGGTTCCTCCGCCGCCGCCTGACCACCAAGCTCCCACCCCACCTGCCCCCACAGACCACCACCCGCCCCACCCCGACCACTCCGCCCGCCCGCGTCCTGGTCGAATGCACGGAATGCGGCGCCCCCGGCCCACCCGAGGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCGAAACCTGCGCCACCGGGCCCGGCGACCCGTCACCCACCCTGCCCGCACCACCCGATATCAAGACCCACATGGCCAACCTCCGCAACCTCCTCAAGCCCGCCTGAACCGGACGCTCACCGTGCTGCTTGACCTCAGGGAAACGAGGGACGGTCTCGGCAGCCGAGAGGCAGAATTGCCTTTGGCAGACGAGCAGCCGACCAGCGACGACCCGTAGGGCGGGGAGAAATGTCCGTTTCTCAAGAAGTGAGTAAAAACAGCACCCTGGCCGGATAAACCCGCAGGTCACGAACT # Right flank : CAATGGCCAGCTGACCATAGTCGGGGCCAGTTCGTGGTCCCCGCCCACGCCGGGCTATCGGCCCACCAGCCCCCTCACACCCCCAACTCCCCCCGCGAATCCGCAATCGCCTCCGGATACGCGGCCAGCAACCGACGGGCCACCGGCAGCGGCATCCGCACCACCACCGGCTGCGGGAGCGTCAGTTCGCGTTCCGCTACTGCTGTGCGGGAGGAACGCACCCGGTCCGTCACCCGTGCCACCACCCGGACGTCCAGGGTGAACTGGACCAGCACCGAGGCGAACTTCGGCTTGTGCAGGGGCATCGAGCCCGCGCCACTTGCCGACGCGTCGGTGGCCGAGCCCGCGCCGCCTCCGTTGGCCATCAGTTGGTTGAGGCGGAACTCGTCGGCGTTGAGGACTCCAGCGCCGAGGAGGCCTCGGGCCTGGCGGCTCTTTTCGGCTGCGGACTGGGCGTCGGTCTGGGTGGGGCGGGGGGCGGTCAGGTCGCTTTGGGCCAC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 826373-826523 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHEF010000001.1 Streptomyces sp. COG19 ctg.s1.000001F_arrow, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 826373 29 100.0 32 ............................. CTGGGGTATCACGATCTGTCGCTGACGGCGGT 826434 29 93.1 32 ........C....A............... GAGATCGGGGCCGTCCAGGTCAAGCCCCGGCA 826495 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 97.7 32 GTGGTCCCTGCGCGAGCGGGGGTGTTCCG # Left flank : CACCGAAGGACGCCTTCGCCCGCGCCTTGCACATGGCGGACCTCTTCGCGGACTCGAAGCAGGACTTCCCGGGCGCCGCCAGGATCATCGACCGGGTACTGAACCTGAAGGACGAACAGCCGACTCCGGTGCAGCGGTTGCAGCTGCTGGTGTTGCGCGGGGACCTCGCGCAACGGCTGGGGGACGCGGAGGGGGCGCGGGGGTGGCTGGAGGCGGCGGAAGCGGTTCAACTCACCGCTGAGGAGGAGGCCTTGGCCCGCGATGCACTGGCTCGGCTGAAGGAGCTGCGGGGGTGATGGAGCAACCGGTCGGCCGCCGAGGGCTGCCCCTCCAGGCTCGGCGGGGGTGCCCCCTTATGACTCTCTGCCGAACCACCCGCCGTGTGGACGGCTCTAGAACCAACTGCGCCCAGCCGCCCCCTTTGCGATCATGTAGAGGTGAGCACGCAGCCCAAGAGTCAAGGACTGGCAAAGCCCCTATAAACCAGCAGGTCAGGAAGT # Right flank : GCTATACCGGAGGTCGGCCCGGCGCCGGGTTGGGCGGCATCTTCGGGGCGCCGGAGCCGCGGTCGCCCATCTCGATCCGCCGGGCACTCAGCCCGTACACACCGAGCGGCGGGAAGAGGTCGACGCGACGCGGGCAGTTCCCCTCCGCGCACTCCTCGCAGAGCAGGTCCCGGCCGGTCGCCGTGCGCCGGGCCGCGGTGACCGGGGCGGTCCAACATGCCTCGCAAACCCGAACGTCCGTCGCGGACAAAGTGACGGTCATCGGCGCCGCCCGGGCGCCCCGGGGAGGGGATGGGCACGCATGATGCTGCCTCCGTTCTCATGGATAGGTGGTGACCCGCACGGCCGGGCGGGAGTCTGCAAGAGGCGGCCCCGGGCCCGCCGTGACCCGGGGCCGGGGTTCAGGAGACCGCGTACGGGCGGGGCGGGCCGCCCCGCCGACGCTCCCTGTCCGTGCACGCCGCGCAGAGGAACTCCCAGGCCGCCCCCGTGAACCGGGC # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCTGCGCGAGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.60,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 831143-831354 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHEF010000001.1 Streptomyces sp. COG19 ctg.s1.000001F_arrow, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 831143 29 100.0 32 ............................. AACGTAGCCATGGGGCAACTCTTTAGCGCTAA 831204 29 100.0 32 ............................. AAGCAGGCATCGTCTACCAGCCGCGTCCCCGG 831265 29 96.6 32 ............C................ CTCGTCCGGCTCGTCACCCGGGGCACCGGCAC 831326 29 75.9 0 ............C........CG.ACAG. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 93.1 32 GTGGTCCCCGCGTGAGCGGGGGTGTTCCG # Left flank : TTGGGCGCCCACGAGGATGATTCCAGAAGCCAGTTCACCGATCGCCTGTGGTGCACCAACATCCGGGGGCCCGCCGTACCGACCGGGCCCGTCTCCGGGCGCGGCGGGGAAATCGGGCGCTTCGGCGGAGGCGGGGTCTTCGGCGGATGGTCCGGGGCGTGATCCGACACATTGGCTCCAGGGGCGGCGGGGCGCCCATCGTATGGCCGCTCATCGCGGCCCCTGCCCCCGATGAGCCGCCCCTTCACCCGTACAGATGGGGCTCCCCGTACAACTTGACGCGATTTTGCGCCAGGTTTCCAGCAGGCGGGAGAGGGGGCGCGGCAGACGTAGGAGCTTGCCCGCACAGCACCTTGCGGTACGCCGACGCGAGCCAATGTTCCGTGCGGCAAGACGTTTGCCGTTGCTGGTGGTTGGGGCTCTGGCACCATGTCAGGGCGAGGGCCGCAACCATGAGTCAAGAATCGGCAAAGCCCCTATAAACCAGCAGGTCAGGAAGA # Right flank : GCCGGGGCCTGGTCCTGTGCAGTGGCTCCAGGAGTGTGGGAGCAATCCCTTCGTGATCGTTTTCCCACGGTTGCCGCGCCGCTACGGATGAAGGAGCACGCCCCGCCCCGCCCCGTTCAGCTCGCGGGGTTGAACGGCACTCCCTTGGGGAGGGCCTTGGTCAGGTGGCCGGTGAACCGGTCCTCCCGGATGCCGATCGTCGCCTTGCCGAAGTCGGCGGCGAGGAGCTTGTCGCGGAGGCCGTCCGGGTAGCCGTTCCAACCGACCAGCGGTGCGTAGTGCCAGGTGCCGAAGTGGTTCTCCGGGGGCTCGTCCTTGGCGGTGGCCTTGCGGAAGCAGTGAGTGCTCGCGCCGTCCTTGTGGTAGACGACCTTGGCGTGCGTGCCGTCGAAGGGGACGTCCGCGGCCTTGTGGACCGTGAAGTTCCCGTGGGCCGATGTCGCCACGTACTCCGCCTTGTCGTCGTGGACCCAGACCACGATGTGCTCCCAGTCGTGGCG # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGTGAGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.50,-6.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 102761-103094 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHEF010000010.1 Streptomyces sp. COG19 ctg.s1.000007F_arrow, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 102761 29 100.0 32 ............................. GTCGCCGTGGCCGTCACGGGGCGCGGGGCGCC 102822 29 100.0 32 ............................. CGATGTCCCCGCTCGACCGCACCGCACGCCGC 102883 29 100.0 32 ............................. GAGGCCGACGGCATCGACGGTGTCCTCGCACT 102944 29 100.0 32 ............................. AGGACGTCGATATCGACACGGAGCTCTCTGGC 103005 29 93.1 32 .....................G...T... GACCTCTGGGAGGACAACCTGTGTCGGTGGCC 103066 29 79.3 0 A...........A...........CCAT. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 95.4 32 GTGGTCCCCGCGCACGCGGGGATGGACCC # Left flank : CACCGCCCTCACCGCAGGCCTCCCCGCCGAGATCAACTCCCCCATCGGCTTCCTCCGCCGCCGCCTGACGACCAAGCTCCCCCCGAACCTGCCCCCGGCGACCACCACTCGCCCCACCCCGGCCGCTCCCGCCGCCCGCGTCCTGGTCGAATGCACGGAATGCGGCACCCCCGGCCCGCCCCAGGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCGAAACCTGCGCCACCGGGCCCGGAAACCCGTCACCCGTCCTGACCGCACCACCGGACATTAAGACCCACCTGGCCAACCTCCGCAACCTCCTCAAGCCCGTCTGAACCGGACGGCACCCTATTCAGGGGAACGGGCATCGGCCTTGGCGACCCAGGGGCAGAATCGCCTCTGGCAAGGAGAGCAGCCGACCCAACGACGATCAACACGGTGGGGGATATGTCCGTTTGTCAAGAAGTGAGTAAAAACAGCACCCTGGCCGGATAAACCCGCAGGTCACGAACT # Right flank : CTCAACGAAGCTGCGCTCCTGCCGGTCGCGGCCCTCGGCGGATGGCGGCCGTTGGACAGTGTCCGGCCGATCACGACGGCCCGCGGAGAGTCGGGCCGCACTTGCCTGACCACCAGCCGTCACGGCACGGATACGGCGCCCGTATCATCCCGTCATGATCATGCTATCTGTCGACCCTGCCTCGCGGAGCTACGCCGATGGCCAGGCGGTGGGGCAGCTTCTGGTTCTCGCCGTTGCTCTGGTCCTTGTCTGGGTCGTCACCCGGACCTGGCGGCGAGGTCCGGCCCCGGACGGTCCGGACGACGTGGAGAGAACCACCGCCATCGCCGTACGGCGTGGCAACATCGTCCGCGGAGTACTGCTGGCCATAGCCGCCGCCGGGCTGATAGGGATCTTCACCGGCAGGGGATACCAACCTGCCGCAGAGGCGGCCCCCACCGCCCAAAAGCCTGTCGCCCAGTCGCCCTCCGCCACGACGGCGCCTGCGGAGATCAAGCGCG # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGATGGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGACCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //