Array 1 10224-6904 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLDN010000040.1 Clostridium estertheticum strain CF003 contig00040, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 10223 37 100.0 37 ..................................... TTAGAAGGCCAGCTAATAGGCATTCATATAGTAAATT 10149 37 100.0 36 ..................................... TTTTTAAACTTGAATTAACATAAGTCAATCCTTCGG 10076 37 100.0 37 ..................................... TATATAAATTAATTAAATCAAAAGGAATACAAAAAGG 10002 37 100.0 35 ..................................... TGAAATTCAATATTAGTTATCAATGTAACCTTTGG 9930 37 100.0 36 ..................................... GCTTTCTATAGTACTTTCAAAGCTATCACTTCGCAC 9857 37 100.0 36 ..................................... AAGTAAAAAGGATAAGTCCAAGTAGTATTACCTTCT 9784 37 100.0 36 ..................................... TTATTAAGTTCATGCGGTAATCTAATATGTAAATCA 9711 37 100.0 36 ..................................... GAAACTTATAATCCAACATCAAGTGACCCTGCAAAT 9638 37 100.0 36 ..................................... GTAATTCTTCTCTGCTTAAATCCACATTTTCGTTAA 9565 37 100.0 36 ..................................... TAATATGCCAACATTCAAAGAATTATTAATTCCGTT 9492 37 100.0 36 ..................................... GCAAGTAACTATGTTCTTGTACCAATAAAAATAGAT 9419 37 100.0 36 ..................................... CCACTAATCGTAGTTATTACTGCGACTACTGCCCCG 9346 37 100.0 38 ..................................... AACCGCTACTGTGAATGTTGCTACTGCGGTACCAGTTC 9271 37 100.0 35 ..................................... CCATTTAATAGAATGCATTTATGTGAAGATTGTTC 9199 37 100.0 36 ..................................... GGTTTCTTCAGTTCTATATCAAACAAATAATATTTT 9126 37 100.0 35 ..................................... TCAGTTAAAGCATTGATATACAATAATGGGAATTG 9054 37 100.0 35 ..................................... AGCAGCGCTATCTTTATTCCTACTAAACTTATCAT 8982 37 100.0 35 ..................................... AATAGCTGCAATCCCATCTGCAATACTTCCTTTTA 8910 37 100.0 36 ..................................... TTGATAATGGTTTAATATGATGTACTACGCCAGCTG 8837 37 100.0 35 ..................................... AGAAAAAGTTTATCCTTAAAAATAACTTGTTTTTC 8765 37 100.0 35 ..................................... AAAATATTAGTAGACCATTTAACAAAATCACCAAG 8693 37 100.0 37 ..................................... CTCATAACAGCCCCCCTATACAATTGTGCTAGGTACT 8619 37 100.0 36 ..................................... AACAGTAAAAGCATCTAAAAAGGCAGCTCTTGATTT 8546 37 100.0 36 ..................................... TTTGACCTACTAAGTCATAATAATTTTGCTGATCTC 8473 37 100.0 35 ..................................... TCATTAAAATCCTTTCAACACGATCCTTCTGTCCA 8401 37 100.0 37 ..................................... GTTGGTAAGGGTTATTCTTTGACTGCTGAAGGTGTAA 8327 37 100.0 35 ..................................... AATAATGTTTCAACTTATGCAGTATATAATAATAG 8255 37 100.0 34 ..................................... ACATCTTCAATGCTCACTCGTTCCGTTTCACCGC 8184 37 100.0 35 ..................................... CTCATATTTTGTAGCAGTTACTTGATTATTTATCT 8112 37 100.0 37 ..................................... TATTTAGATAGTCAAGTAATAACAACAGTTACAGCAC 8038 37 100.0 36 ..................................... CTAATTGATTTATTTATTTTCTGTTGCAATGGTAAA 7965 37 100.0 35 ..................................... GTAAATATCCTTCACTTATTGATTTACCTTGCATC 7893 37 100.0 35 ..................................... AGATTTGGTAAAAATAGAGTTAGAGGTAAAAGAAG 7821 37 100.0 38 ..................................... TATAAAAACAATCAATATGGTTGACTATGTTGATTCAG 7746 37 97.3 37 ...........T......................... AGTATAGATAAGGTTAAAGAAAATAGAATAGATTATT 7672 37 94.6 36 ...........T............A............ TAGTTACTTTTAAAATTTTACGAAATTTAATAGTAG 7599 37 97.3 36 ...........T......................... TTTATATAGTATACTCAACGTATGCTCAATATGTTG 7526 37 94.6 35 ...........T.....T................... TTAATTGATGCTTCCATAGTCTTTCACCTCCCTGG 7454 37 97.3 36 ...........T......................... TTAAGCTTTCCAAAATTACCGGTACATAAATCTAGT 7381 37 97.3 36 ...........T......................... TTGATGAATCTTCAGCTCATGGGTGCGAAGTTGAGA 7308 37 94.6 37 .........A.T......................... GGAGGTAAACATGTAATTATTGATTTTAGTAGATTTG 7234 35 94.6 35 ...........--........................ CTTTAACATATGGTTCATTACCACCGGTTGCTTTA 7164 37 91.9 39 ....A.....GT......................... ATAATTATATAGGGGGTGGGGCTATGGTTAAGTTGACAG 7088 37 97.3 36 ...........T......................... GGTGTTGCTTCTTTAGTTTCTACGCTTCCAGTTTTT 7015 37 97.3 38 ...........T......................... AAATTTAATTAGAATTTAATTAAGCTTAATTAAGAAAC 6940 37 97.3 0 ............................A........ | ========== ====== ====== ====== ===================================== ======================================= ================== 46 37 98.9 36 ATTACTTAAGACATTAAGCTCCAATGGAGATTGAAAC # Left flank : GCATTGATGGAAGAAATTGAATATGTACCTTTTTTAATTAGATAACAGCAAAGGAGTATGTTATGATATATTTAGTTAGTTATGATATAGTTAATGATAGAAAGAGGACTAGACTTCATAAAATGCTGAAAAATTTTGGTGCTAGAAACCAATTCAGTGTTTTTGAATGTGATTTAGATGGTAAAAAATATGTTGAGCTTGAATATAAAATAAGAAAGATTAAAATTGAGAAGGGTGACAGCATTATGGTATATCCTATATGTTCATCTTGTGAATCTAAAATTATAAGAAGAGGTATATTTGTTCCACTTGATGTTACAAATATGATTTATTAAAGCGCAGGCCTATGTGTAATTAAAACACCGGTACCCTGGCGATGCTTTAGAATAGGCACTTGAGAAGCAATTACTATAATATCTTGTGCAAATATTTAATGGAAAATGATACTTGGCGAATAAGGTGCCTATAAACCAGTGGTTTCAAGGGGTAAAACGCGAGCG # Right flank : AATGAAATCATTATCGGTTGTCTTTCATACCTGATTACTTTGAGTCAATATTACATTTTGTTACAATATAGGTCTGCGAATTTTTCAAATGGCATTACTCGTTTTATAATCTGAACTTCAAGATAAATAACAAAAGATCTAATAGCTACACTGAATTTTATAGCATACTAAACTATATTTATGAAAACTTGATGAAAGTGATTAATATAGTTTTAGCAAAACCTCATCATGAGCTGATAAAAGATAGCAGAGTATGTAAATACCAAAGCTTAAAGAATACAAGTATGGATACTATAAAGTGGCTTGAGAAAAGACCTCATTTATTAGAGCATATAGATGGTAGAAATATCCCAACTCAGGCTTTACAGGTGACTAAAAAGGTAACACTCGATACTAAGGAAAATAGATTTCTAAAGTTTATGTTAATAACTATAATTCACAAGATAGATAGTTTTATAAGAACCTATTCATCAACACCTTGGAAAAAGAATGAGGATATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTACTTAAGACATTAAGCTCCAATGGAGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA //