Array 1 27854-27526 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDSX01000025.1 Pseudomonas psychrotolerans strain SB18 contig_25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 27853 28 100.0 32 ............................ TATCGGTGACGGCTCGGCACTGATTCCTATGC 27793 28 100.0 32 ............................ TCCGCAGCGGCCAGGGCGAAGGCCATACGGCG 27733 28 96.4 32 .................T.......... TTCTGGTCATCTCCAACGATGGCGTCCTGGGC 27673 28 100.0 32 ............................ ATAGAACGGCGGGCACCAGCGACCGAAGACTT 27613 28 100.0 32 ............................ TTGGGGAAGGCTAGCTCCAGCCAGGTGAATAG 27553 28 78.6 0 .....................AA.CCCC | ========== ====== ====== ====== ============================ ================================ ================== 6 28 95.8 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : CCACGCCTTCGCCACTGACGCCCTGGCCCTGCATTACGCCCGGCAGGCGATCGATGCCGGCCTGGATCTACAGATCGAACCCGAGCTGCGCGCCTTCTTCTATCTGCCATTCGAGCATTCCGAAGCCCTGGCCGATCAGCACCGCTCTCTCGAATTGTTCGAAGCCCTGGGCATCGAGCACTACCGCAGCTATGCCCAGGCGCATCTGGACGTGATCGTCCGCTTCGGGCGCTTTCCACACCGTAACCGGGCGTTGGGCCGGATCAATACAGCGGAAGAACAAACATGGCTGGATGCAGGCGGCGGATTCTAAGCAGGCAGGGCTCAGGCTAGCATATGTCCAGTCTTGGTGAATGACGCTGCATTCACACCCTCTTTTTATACACCCGCCTTACAACTATAAAAATCAATAACTTGGAAAAGGGCGCGAAAAAAAGGGTTTTGCGAGGAAAATCCGGTTAGTCTTCGATATATCAAGGTGTTATGTAGAAAACGCTCTA # Right flank : CGTATCTCTCTCGGCCTACCCGTTCCCCGCCCCATCCCGCCATTCCACCACCAGATCCGCCCGCGCCCGATCCCCGTCGATCAGCCGTGCATTGGGCTCGTCGGTGCTTGCCACCCAGGCCTCGGCGGCTTCCCGGCTACGGCCGAAATGCATATGGCGGGCGACCAAGCGTTCGCGGCGTTCCTCGGGGTCGACGCGCACGTACCAGCATTCGTCGAACACCTCGGCCACATCGCTCCAAGGCGCCTGGGTCAGCAGCAGGTAGTTGCCCTCGCTGATCACTAACTGGGTGTCGGCAGGCACCGGAATGGCATTGGCGATGGGCTCTTCGATCTCGCGATTGAACAGCGGGGCATAGACGGTCTCTCCCGCTACCGGGTCTTTCAGGCGCTGCAGCAGGGCGCGATAGCCGCGGGCGTCGAAGGTGTCCGGCGCGCCCTTGCGCTGGGCGCGGCCCAGGCGGGCCAGTTCGCGGTTGGCCAAGTGGTAGCCGTCCATGG # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //