Array 1 1542213-1540966 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP017062.1 Lactobacillus acidophilus strain LA1 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence            	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	===========================	==================================	==================
   1542212	    27	 100.0	    34	...........................	TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG	
   1542151	    27	 100.0	    34	...........................	TAAATCCGGACAACGCTTGCCACCTACGTATTAG	
   1542090	    27	 100.0	    34	...........................	TCATTGAGACACACATTGCGACGACTAAACTCTG	
   1542029	    27	 100.0	    34	...........................	TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG	
   1541968	    27	 100.0	    34	...........................	TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG	
   1541907	    27	 100.0	    34	...........................	CTTAGGCTATTCCGCACACAATATGTGGCGTGGG	
   1541846	    27	  96.3	    34	..............A............	TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG	
   1541785	    27	 100.0	    34	...........................	CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG	
   1541724	    27	 100.0	    34	...........................	TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG	
   1541663	    27	 100.0	    34	...........................	TCATTGATGCACCGGTACTTAACTCAAATCAAAG	
   1541602	    27	 100.0	    34	...........................	TGACTACGATATTTTCTTTTAATTATATCTTGGG	
   1541541	    27	 100.0	    34	...........................	CAATATCATCAGCATTTTTCACACCAGAAAATAA	
   1541480	    27	 100.0	    34	...........................	CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA	
   1541419	    27	 100.0	    34	...........................	TATTCTTTTTCACTATCAAAATCAAATATTTCTA	
   1541358	    27	 100.0	    34	...........................	CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA	
   1541297	    27	 100.0	    34	...........................	TATTGATGCAACACCTAGCGCAAGTCAACCTGGA	
   1541236	    27	 100.0	    34	...........................	CAGGGTGGTTTTAAGTACGAGATTGACTACGATA	
   1541175	    27	 100.0	    34	...........................	TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA	
   1541114	    27	 100.0	    34	...........................	TATATGCGACTTATTTCTTACGATGAGATTCCAA	
   1541053	    27	  92.6	    34	...........A.A.............	TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA	
   1540992	    27	  74.1	     0	....T..T.T.A.A........A.C..	|                                 	
==========	======	======	======	===========================	==================================	==================
        21	    27	  98.2	    34	TTTTCTCCACGTATGTGGAGGTGATCC	                                  	       

# Left flank :   CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG
# Right flank :  TGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAAT

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TTTTCTCCACGTATGTGGAGGTGATCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:51.85%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-6.10,-6.20] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [9-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.41   Confidence: MEDIUM] 

# Array family : NA
//