Array 1 190082-187959 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRVP01000006.1 Bacteroides uniformis strain AF21-53 AF21-53.Scaf6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 190081 47 100.0 30 ............................................... AAGATTCATTGAGCGATTGGAAAAGATTGC 190004 47 100.0 29 ............................................... TCTTCAATAAGCTTATCTAACACATAATT 189928 47 100.0 30 ............................................... AAGCCTTACAAGCCGCCTACCCATCGGAGG 189851 47 100.0 30 ............................................... ATAAGCTTGTGGTGGCTGCTGGAAGACCTA 189774 47 100.0 30 ............................................... AGGTAAGCGTTTGTTCAATGTCCTTATATA 189697 47 100.0 30 ............................................... GTTAATCGCTGTTATGCGATATATCCATTT 189620 47 100.0 30 ............................................... AATTTAGGCTTCTTTGATTTGTTCGGCTTC 189543 47 100.0 30 ............................................... AAACCGACGGCAAGCCAAAACAATAATCTC 189466 47 100.0 30 ............................................... CGTCCAATGTCGCATTATCCATCTGGTTGT 189389 47 100.0 30 ............................................... CGGAAGCACCGGACAACTTGATAGCGTCCT 189312 47 100.0 29 ............................................... TGTGATTATCCAGGAGCCAGTAAGCTTTT 189236 47 100.0 30 ............................................... CCAACCGTGGAGATGGCACGGGAGTTTTAT 189159 47 100.0 30 ............................................... TCAAAGATAAATATAGACGTAGCGGTAAAG 189082 47 100.0 30 ............................................... AAAAACAAAAGATTATGAAGACTTCTATTT 189005 47 100.0 30 ............................................... CTCGGTACAAACCAATGGAGCGCCCAAGCC 188928 47 100.0 30 ............................................... ATCGTCAATCTTTGCGCTATTCGATATGCC 188851 47 100.0 30 ............................................... CGCTACCATCTTACCCCACAAGCTTTGCAA 188774 47 100.0 30 ............................................... TGTTGTGTATAAGAGCGCGAACATGACTGA 188697 47 100.0 29 ............................................... TATAGAGCACGACATATCAAACAAAAACC 188621 47 100.0 30 ............................................... AAAAGCAGATATTTATTGCGCTTCTGCCTC 188544 47 100.0 30 ............................................... ATGTGCCTTTGAAAGAGGCGAAGAAACTGA 188467 47 100.0 30 ............................................... GCACATCGTCCGCAACGGTTCATGCCGTTT 188390 47 100.0 30 ............................................... AAGTTATGGTAAACTATATAGATTTAAAGT 188313 47 100.0 30 ............................................... GCTGGGTTAATATCCCAACCCCTTATATTA 188236 47 100.0 30 ............................................... TCACATTGCACCCACCGCAAAACGGTTCTA 188159 47 100.0 30 ............................................... GGTCTCGACGTAGACCACATAAATCACGTA 188082 47 100.0 30 ............................................... ATTGGCGCCGGCGCAATAGCAACCGCGTAC 188005 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 28 47 100.0 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Left flank : AGTGTTCTGTATGGCAGGGCCTGCTTTCCATATTTCGTCCAGAAACACGACATCGGCTGTGGGCAGATAGCCGTCGATGGCACGTTCATACTTGTCGGATTCTTTCAGTCGGCTAATGCTGACAGGACCGAAAATCTCGTCGGGCGTAGAGAAGCGGGACATCAGGTATTCAAAGGCACGGGCATCTGTAAAAGCCGATTTTAACCGCCTGGCTACCATTGACTTGGCTACTCCCGGAGGTCCCAGGAGCAGAATGCTCTCGCCTGCCAGAGCTGCTAGCAGGGAGAGGTTTATTTCAGTTTCTTTTTCGTATACTCCCCGGTTCATTTCGGAAAGGAGGAGACGAATGCGTTGGGTTATTTCCACAATATGATTTATTTATAGTCAGTACTCATGTATAAAGAAAAGCGTGTAAAGATACAAAATAGTAGGGAAATCAGAGAGAGTCTTATTAAGATTCACTATCTTTGGAAAACAAATACACACAGACACGCACACAC # Right flank : TGATTACAAGTAATAATCTAATATTCAAACGATTACACATAGTATTAGAATATAAAAAAAGAATGCTGCTTCTAAAAAAATCCCGCCATTGCGCGGGATTTTTTTAGAATAATTCTAATTGTTGTCCAGGCGTATTCACATCCACAGTCTTTTTCCCATAAAAAAGTGCTATATTTCCAAATTGCTTGTCCGTAATGCACATAATTCCGACACTTCCATAGTCCGGTAAGAAAGATTTAACTCTTTTTATATGTACCTCCGCATTCTCACAACTCGCACAATGACGAACATATATAGAGAACTGGAACATCGTAAATCCATCCTTTTGCAGATTTTTTCTAAATTCCGCATACGCCTTTTTATCCTTCTTGGTTTCGGTAGGCAAATCAAACAACACTAATACCCACATAATGCGATATTCACTAAACCGGTCCATCACATCTCTGGATAGGATATTTTACGCAACTCACCACTGAAACATTTATACAGAGAAGCCGTAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //