Array 1 1264967-1263870 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_011295.1 Coprothermobacter proteolyticus DSM 5265, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                         	Insertion/Deletion
==========	======	======	======	==============================	========================================	==================
   1264966	    30	 100.0	    37	..............................	TCGATGAAGAGGTAGTTCGGCGCGGTGAAGGTTCAGT   	
   1264899	    30	 100.0	    36	..............................	AAACTTCGTGAGTAAGGAAGGTGTAAAAAATTTAGA    	
   1264833	    30	 100.0	    38	..............................	CGGCATGTCGTTTTGTGAGCATAGCAGTTGTGTAGGTA  	
   1264765	    30	 100.0	    35	..............................	ATCGTGAATACATCGCAAGCACCATTCTCGCAAAT     	
   1264700	    30	 100.0	    36	..............................	GGCCTTATGTCTGCGTTCGGCATTTTGAAAAGCAAA    	
   1264634	    30	 100.0	    37	..............................	ATATGTCCCCTTAGCACTTCTCTCTCACCGTAAAAAA   	
   1264567	    30	 100.0	    36	..............................	TATACTCCCTAACTCTTCCCAACAATACCTCGTCGG    	
   1264501	    30	 100.0	    36	..............................	ATCAATTCCTTAAATCCTTGTTTCGGCCTAATTAAA    	
   1264435	    30	 100.0	    37	..............................	TTATGATTGCTGTACATTGAATCGCCATAACTATCCA   	
   1264368	    30	 100.0	    36	..............................	TTGGAGGAACTGGAGGATTAGTCCTCCAGTTAAAAA    	
   1264302	    30	 100.0	    36	..............................	TGAAGATTGGTGAGTCGTACAACCAGGAATTGAAAA    	
   1264236	    30	 100.0	    37	..............................	CTTTTTGCTCGCCACTACGAAATACAATTCCTGCCAT   	
   1264169	    30	 100.0	    36	..............................	TATGATGGTGGAACAGCGTGTTAAAGACATAGCGTG    	
   1264103	    30	 100.0	    36	..............................	ATGCTCCTCTTATTCATTTCAACCCCAGACTCATTG    	
   1264037	    30	 100.0	    38	..............................	GCCCCTGGCATATAAAGTCTTCTCTCACAGCAAGGCTT  	
   1263969	    30	  96.7	    40	......................T.......	TCAAGGAACGTGTTACAGAGTCCATTGACTCGAAGAAAGC	
   1263899	    30	 100.0	     0	..............................	|                                       	
==========	======	======	======	==============================	========================================	==================
        17	    30	  99.8	    37	GTTTCTAGCTTACCTACAAGGGATTGAAAC	                                        	       

# Left flank :   TTTTGACCGTATTCAAAGTTACCTAAAGTAGGCTGCACCGTTACTGTAAATGTTAGCGTCGCATCGCTAACGTTCTTTACTGTCAATACTACAGGGTGCAAGCCTGTAGCAGTCATATCTATTTCATAAGGACTTATCAAAGCAGGTGTTTTTACAGCAGCTACTCCATCAATCAAGCCTGAACCTTGTATCATTACGCTTATAGGCTCACCAGTAACTTTGTTGTATAAGACGCTTGCTGTATTCATAAGAGAAGCTCTAACTTGTTCAGCAGTCCAATCTTTGTGTGCCTGCTTAACCAGTGTAGCTACAGCACCTGCAAAAGGTGCTGAACAGGAAGTGCCACCAAACATGTTGTAATACCGCATAAACGTAGCTGGATAACCAACGTAACCAAGCAAGTCAGGCTGTATTTCTCCATTTAAGCTCGGTCCTATGGAAGAGTATTCTGCAACTTCACCACCATTTGCAAATACATCGCAAGCACCATTCTCGCAAAT
# Right flank :  CCCCTTCTTTCACGGTTGAGCTGAACGGTGAAGTGCGAAATGACGTACAGGTAGAAGATTCTGGAGATCTGTGAAGGGCGTGAGTAGATAAGCGAAGAGCAGTTCATCGGAGATGCTAATTGTTACTTAAAAAAGGTGGGTGTAGAAAGGTAGTAGATCCTGAGATCGAAGCTAAAGCAGGTAAGGTGTTTATGAATCCTACAGAAGAATTCAGTAAACACGTTCCAGAAGATGAGTTCGAGTGGCACCATTTACCAAAGTTCGTTGCGATGAAGCTTAATGAAGCAGGCGTAATTGTATTTGGTAAGTGGGAGAGGGAAGAATGAATTACAGTAGGCAGGTCCCAGGTTGCGCGCCTATTGGAATGATATGCACAGTATGGCAGATGTTTTTAGGGAGCAGTATTTCTGGTAAAACAACTCCCATTCTTGATAAATGCAATGGGCAAGCTCTTTTGTTGAGAATTACCAGTTGTTATTCAAATTGGTTCGAACACTTTT

# Questionable array : NO	 Score: 9.25
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCTAGCTTACCTACAAGGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:60.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-0.50,-1.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : NA
//