Array 1 386937-384710 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADZHK010000029.1 Shewanella algae strain CCUG-72678 72678_29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 386936 29 100.0 32 ............................. TACCTTTAACACAATGTTAACAATGCATTAAC 386875 29 100.0 32 ............................. CCAGGCAATTATCATTATGCGACAGTTGGAAA 386814 29 100.0 32 ............................. CTCTTTTGCCACCAATGCCGCAGCATAGAGGC 386753 29 100.0 32 ............................. TACTCTTTGCCGGACCAGATGCCTATGTGACC 386692 29 100.0 32 ............................. CCCATCACAGTTAAAACTTCTGCGGATCAGCC 386631 29 100.0 32 ............................. AGATCGGGGAGTTCGTCACCTACTGCGTATCG 386570 29 100.0 32 ............................. CCAACGGCGTCCGTTAATGTTTGTAATACGCT 386509 29 100.0 32 ............................. GAGGTTTATCTGACCGGCGTTCTCGATACCTA 386448 29 96.6 32 ............................A TTGGCATTACGGCTCTGGCTCTCTGCCTTGAC 386387 29 100.0 32 ............................. CCGCAGGGGCCGTCAGCTTAGTGACACCGTGG 386326 29 100.0 32 ............................. CCGTGCATGAGATTAAACTGTTGCTCTGTCAT 386265 29 100.0 32 ............................. ATCTGTTAATCAGACTGGCAAGCGAAGAGGGT 386204 29 100.0 32 ............................. ATATCGGTCGCACTATCGCCAAATTGGGAATA 386143 29 100.0 32 ............................. CCATTGGCACTCTGCCCCTTTCCTATATGAAT 386082 29 100.0 32 ............................. CTCTATGAGAGGGCTAAAGCTGGCCAGCCTGC 386021 29 100.0 32 ............................. ATGAGACTAGGACAACAAAAAGGAACTTTCTA 385960 29 100.0 32 ............................. TTTCAGACTATCGAGGCGGAGGAACTGCCAAG 385899 29 100.0 32 ............................. CCTTCAGCCACGGCGCCAAAATCCTCGCGTTC 385838 29 100.0 32 ............................. GTTTTTTCGCTCTACAAATCGACTTCAACCGG 385777 29 100.0 32 ............................. CTTATCCCTTGATGCCGATAAGTGACGATATC 385716 29 100.0 32 ............................. TTCAGGGCGTTTATCCATCTGCGAAGGTGGAT 385655 29 100.0 32 ............................. CTTATCCCTTGATGCCGATAAGTGACGATATC 385594 29 100.0 32 ............................. GTAGCGCCCTCTAATTTGGTTTAATCGGATAA 385533 29 100.0 32 ............................. AACGACAAGCTTTATGTAACCACCGCTGGTGA 385472 29 100.0 33 ............................. CTTTGGCAAGTCTTGAGCGAAGGATTCCATTAC 385410 29 100.0 32 ............................. CAGGGATTGGGTTACGGTCAGAGTCGGCGCTG 385349 29 100.0 32 ............................. GAATATGAGGCCAGGATCGCCGGTATTAAAAA 385288 29 100.0 32 ............................. CACTTGAGGAACACCAGCAGTCTACAAACCAG 385227 29 100.0 32 ............................. TGACTGATAAACATGCCGAGGAACACGATGAT 385166 29 100.0 32 ............................. CAGATAAAAATACTTGCCTGCTTTGTTAAATA 385105 29 100.0 32 ............................. CGTTGACGCTTACTGTGAGACTGGGTAGCACG 385044 29 100.0 32 ............................. GGATCATATTGTTTTTAACTTTTTGGGCAGCA 384983 29 100.0 32 ............................. CGCTCCATTAGCGACATCTCAGACCAGATGAA 384922 29 100.0 32 ............................. ATAGCGTCAGACTGTTCCGGGAGAAGTACAAC 384861 29 100.0 32 ............................. TTTTTCGATACCGTGGTAGGTAACATGCAGCT 384800 29 96.6 33 .A........................... CGGTACCGGCTGGGGCGATGGCTTGCTGGCGTT 384738 29 89.7 0 .A........................GT. | ========== ====== ====== ====== ============================= ================================= ================== 37 29 99.5 32 GTGTTCCCCGCACCCACGGGGATAAACCG # Left flank : GGTACTGGCAGCCGGTGAAATTGAGCCGCCTCCAACTCCAAAGGATGCCCAGCCCATTGCTATACCAGAGCCGAAACCGTTGGGAGAACAAGGACACAGGAGCCAGTAACTATGAGTCTGTTGGTTGTGGTGACCGAAAATGTACCGCCTCGCCTACGTGGTCGTTTGGCCATCTGGTTACTGGAGGTGCGTGCCGGGGTTTATGTGGGTGACACCTCCCGCAAGGTGAGGGAAATGATTTGGTATCAAATCAGTGAATTGGCAGAGGAAGGCAATGTGGTGATGGCCTGGGCCACCAATACAGAGTCAGGATTTGAATTTCAAACCTTGGGTGAGAATCGTCGTATGCCGGTGGATTTGGATGGTCTGCGACTGGTCTCATTTTATCCAACTGAAAAATAACAAAATATTGCTCTTTAACAACTTGGAATAATAGCCTAAAAAGTTGGTGAATATTTTTAAGTGAAAAATCGCTTAAAAAACAATAGTATTTACCAAGA # Right flank : TATTTCTTTACTGTACAACCCCAGCAAAATCCGAACGTCTTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAGGTGATCTAAATAGCGGCCCGGCTCAAGGCAGCATGTCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGATAACTGGAAGCGTCCTGCTCTGGGCGGGCGCCATTCCAGGGTTTGTCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTACCTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCGATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCTTTCAAGGGGGAGCGGATAAGCGGGGCAGTGTAGCTGACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGACGGCCAGAAGGCAAACACCTCCTGGTGGTGAATTGCCGGATC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCCACGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTACCTACGGGGATAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.00,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //