Array 1 756165-754396 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHFR010000001.1 Treponema rectale strain DSM 103679 Ga0415372_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================== ================== 756164 36 100.0 26 .................................... AAGATTTGTTTCTACCTGCTGAACAA 756102 36 100.0 26 .................................... TCTAATGACATTGACGACAAATGTGC 756040 36 100.0 25 .................................... AATAATGCGGTCGAGGTAAACTATG 755979 36 100.0 25 .................................... TCATAAGACTGCTGGAAGAATTCTT 755918 36 100.0 26 .................................... ATGAGCAGCTGACGGACTTCTTTTTT 755856 36 100.0 25 .................................... CATTTATTGAGTGTTGCGTAGTCTT 755795 36 100.0 25 .................................... ATAAGGATGTTACTGTTCCTTCATT 755734 36 100.0 27 .................................... AGTGAAAAATGTGTTGACAAAGTTATT 755671 36 100.0 27 .................................... TATCAATATGTTGAAGGATATGTATCT 755608 36 100.0 25 .................................... ATAATCGCCATCACACATTGACAAA 755547 36 100.0 26 .................................... AGAAACTCCAAATTCATCCGAATAGA 755485 36 100.0 26 .................................... CGGTCAAAAAGAATCTTGATTATTGC 755423 36 100.0 26 .................................... ATGTATAAATCAATAGTATCACCAGA 755361 36 100.0 26 .................................... AAACCTGTTGTTTCTGTGTCAAAACA 755299 36 100.0 26 .................................... CTTCCTTCTAAAAATGCCCTCAGACG 755237 36 100.0 26 .................................... GGGGATTGAAAAGTTATGAGCAGGTA 755175 36 100.0 27 .................................... AGTTATATAATCCGATTACGCAAGAGA 755112 36 100.0 26 .................................... TGCAGACTAATAAACGGGGTAGGGAA 755050 36 100.0 25 .................................... TTCTGAGCGATAGGATTCAGAAGAT 754989 36 100.0 26 .................................... AAGTTCCTTCTAATTATACCGGAAAG 754927 36 100.0 27 .................................... CAGTGCCAATACTTGACACTGTATTTT 754864 36 100.0 26 .................................... AGTTTTTTTTGCAGAAGAACTTGAAG 754802 36 100.0 26 .................................... CAGCTGATAATCTGTCCGTCGTCATC 754740 36 100.0 26 .................................... AATGTCTTTTACCGCACCATTGCCAG 754678 36 100.0 26 .................................... AGGGTGCGATTTCCGGAGCCGTAAAG 754616 36 100.0 25 .................................... TTGTCGTCCATATCGTGTCGTAGTT 754555 36 100.0 27 .................................... CTTTCGCCTTTTCTGTACTCGATTATA 754492 36 100.0 25 .................................... TTTATAAAGTCATGTGCCTGCATTA 754431 36 88.9 0 ..............................AA.C.C | ========== ====== ====== ====== ==================================== =========================== ================== 29 36 99.6 26 GTTTGAACTTCATATTAAATTTCTACTGTTGTAGAT # Left flank : AATGAAATTTTTATATATCTACAATCTTATTACCGTGCTTTTATGAGAAATCGAGCTATAAAAGATTTTCCTGTTTTTAACATGTACAGCGAGGAGGAATAAAACAATGCTTTTAATCAGTTATGACATAAGTAATGATAAAATTCGAACTAAATTCTCAAAATATCTTTCAAAATTCGGATTTCGTCTGCAATATTCTGTTTTTGAAATTACCAACAGTGATACAGTGCTAAAAAATATAGAAGCAGAAATTCAGAATACTTACATGAAGACCTTTACAGAAGAAGATTCTATCATTATATTTAACTTATCAGAAACATGTAAGAAAACATGTTATGGTTATGCCAGAAATGAAGAAAAAGAAGTATTCATAATTGGCTAGCAGTTGCAAACCTTAGGTCTTACTGGAGAATTTGATGAAAAAATTGCTTTTTTTATCAATTTTGGCCGCATTATATGCGATAAACAGCAAGATACAGTACTGTTGTACATCAATAAGG # Right flank : GCAGATATAATACTATAATAAAAAAGCAAAGTTAATTTTATATACTTGAACACTATAATAACTTGTGGTGTGACCGGAGGAATGAAATATCACTGGTGTATGAAATGGAAATTTAACTGACGGACAAGCGATAGTAAGGGCGAGCGTAAGCGAGTTGCGGAACAGAGTGGAGCAATGAAGCCGCGTAAGACGGCGAAACCCTGAATAGCGCGGTTTTTGCCGGCGGCAAAAATGGCCCCGTATAAAAAATATTTTCAAAAAAAGAAGGTGAAGTTTTATGGAAAAACGGGAAGTGAAAATTCACGGAATCTACAGACATTTTAAAAACAAGTTTTATATTGTGGAAGATGTCGCTTTTCATTCGGAGACGAAAGAGGAGTATGTGGTTTACCGCAGGCTTTACGGAGATAATTCGCTCTGGATTCGGGAAAAGGGTATGTTTTTAAGTGAAGTTGATCACGAGAAATATCCGGATGTAAAACAGAAGTGGCGTTTTGAGC # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.22, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAACTTCATATTAAATTTCTACTGTTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //