Array 1 1087481-1087689 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP018680.1 Vibrio casei strain DSM 22364 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1087481 28 100.0 32 ............................ TGACCGCAACCCAGCGGGCGCACAAATGATGA 1087541 28 100.0 32 ............................ TCTACTGTAACTTGGGGTAAGACTAACGTAGT 1087601 28 96.4 32 ........................G... GTGGGTTTTGTTGATACCGTTGATAGCTATAC 1087661 28 96.4 0 ....................T....... | A [1087683] ========== ====== ====== ====== ============================ ================================ ================== 4 28 98.2 32 GTGACCTGCCGAATAGGCAGCTAGAAAA # Left flank : TTTTCACTTATGAAGGAAGAGGGGTTATTTGAACTTTCAGCTGTATTACCTGTAACTGATGATGCTAAAGAGGTCAGGTTTATACGTAATCAAGCTATTGGTAAAAGCTTCCTAGGTTCAAAAAGGCGGCGAATGAAACGCGCACAAGATAGGGCTGAAAAGCTCGGAAACATTCAGCCGAATAAAGTTAATGAAGACCGTGTTTTTGATAACTTTCATCGTATACCACTTTCTAGTCAGTCTACCAATCAAGACATCATGCTTCATGTTCAAAAGGAAGAATGTGTGGATATTAGGCTAAACCACTTTAATTCATACGGACTAGCAACGAATCAAGCATGGAAAGGAACAGTGCCTGATCTGAAAAATACCATGTTTTAAGTATGTTGTTTATTATCTTGCAGAATCAGTGTCTTATTCGTTTTTTTGAAATACAAGGTACTTTAGGGTTTCTGGGCGTAATCATTTGAAAACAGGTGAAGTTATGACTATTTTCTATA # Right flank : AGGTCAGGAAGAAAGCATCCATGCCTGCTGATAAGCAGTAAAACATATAAGGGTAACCCTACTAGGTGTTGATTAGTAGGGTTACTTTTTTCATGGAATTTATAGAGTTACGTGGGCCAAAATTGTTGAAATTATATTTTATCTAATAAAATTGACTTTATATTGGATCATTTTTGAGTTGAGAAGCATATTATGCGCAAAAAACAGTTATCAGAAAAAGAACTGTTTGAGGGTATGACCCCTTATACTGCACATGCTGATGAAATAGCCATTACTACCTTAATTGAATTAGGAACTGAAGCTTCTGAAAGAGATTACAGGATGGCTTTAGAGATAGTTGATGTCATATACGATGCCGAGCCCGGTACACCTGAAGGTGTTGAGCTTGAACAGCTAGCTTTATTTGTTGAAGAGTATGAAGAAAAACATTATCCGATATAACGATATAAGTGGAGTGAGCAGTGTTTTTCCTCTTTTTAAAGTGCAAACCTTGCTCACTC # Questionable array : NO Score: 2.77 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACCTGCCGAATAGGCAGCTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //