Array 1 78397-83466 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRYO01000002.1 Bifidobacterium adolescentis strain AF15-3 AF15-3.Scaf2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 78397 36 100.0 36 .................................... AGATGCTAAATGACGCTATTGCATTAGCTAATACAC 78469 36 100.0 38 .................................... GCGGAATTCCTGGCTTATTTGGTCAAGTGATTGGAGGA 78543 36 100.0 34 .................................... GCCAGGCTGTTGCAGCAACGCAATCATGCCGCTT 78613 36 100.0 35 .................................... TAAAGCGTGCCGTTATCACGATCAAGGACGCTCAA 78684 36 100.0 35 .................................... TGGACGTATGGATGACGTCAACGTGCTTAATGAGA 78755 36 100.0 36 .................................... TCCCGAAGGCACTGTGTTTACCGTGAATCCTATGGG 78827 36 100.0 38 .................................... GCAACACCTGCTACATGCAACTCGAACTGCAACGCGCA 78901 36 100.0 36 .................................... AAATATTTATGTCGCCAAAATGGTTGACAGAAAAAC 78973 36 100.0 36 .................................... CGTACATTATCGGCTAAACTGGCCGAAGAGGGGTAT 79045 36 100.0 37 .................................... TGGTGAGTGCACCGTGTTGAAAAAACAGTGGAAACCG 79118 36 100.0 36 .................................... ATCAAATACGCGGCCACATGGCTCAATGCTGCGGGA 79190 36 100.0 36 .................................... TTATCACTGTTGCGTGGCGTTTCCATAATCTGCGCG 79262 36 100.0 34 .................................... TTCAGCTCATGCTTTTCAGAATCGATCACAACCA 79332 36 100.0 36 .................................... TCATCTGCACGCAGGCCGATTATCAGGCGAACAAGA 79404 36 100.0 35 .................................... CAGGGCGACAGCGGCCCGCACCGGGTGAAATCCTG 79475 36 100.0 38 .................................... GGAGTAGCAATGAAAGCCAGCGAACAACAGGCGCTCAT 79549 36 100.0 36 .................................... GACACAGACTTCACCTACCGCACAGGCGAAACCGTG 79621 36 100.0 34 .................................... GGTGAAACGAGTCGGGCGCGAAAGCAAGAAACAC 79691 36 100.0 38 .................................... AAGGGCGACATGTACGTCAATGCCATCGCCTGGCTGAC 79765 36 100.0 38 .................................... GCGGTGCCGACCTGAGCGGTGCCAACCTACGCTGTGCC 79839 36 100.0 37 .................................... TACCGTAGCGCTTGAGAGTGCGCGGCGAACCAATGAG 79912 36 100.0 37 .................................... TCAGATGAGGTTTTTTTACGATTCGCGGAATCAGAAC 79985 36 100.0 38 .................................... ATGGTGCGAGACACCACCCACATGTAGCGAGATTACGC 80059 36 100.0 33 .................................... ATCTGATTATCGATTTTCGTCATCGCGTCGGTA 80128 36 100.0 36 .................................... GACCCTAATGCGGAATATCTCGGCGCGGACAATTTC 80200 36 100.0 36 .................................... CAACTCACTGCGAGACTTGGCCGCCAATACAACGGA 80272 36 100.0 35 .................................... GGAATACGGCTTTACTGTCGGCACCACGGTAGACT 80343 36 100.0 36 .................................... TTGTCGATGTCGAATCCGGCCGCGTCGGCGGTGCTG 80415 36 100.0 35 .................................... GAGCGAACACGTGAACTGCCAGATCTGCGGGGCCG 80486 36 100.0 36 .................................... GTGAAGCAGTTGGAACGGAGTATGTGACATGGCGCA 80558 36 100.0 34 .................................... GACAAATTCCCACAACTTGAGGCCGAAACCAAAA 80628 36 100.0 36 .................................... GGGTTTTCGCTTGTATATTGCGGGAAGTCGCATTCC 80700 36 100.0 34 .................................... TTGCACATTTTTCCTGCTCCTGTTTCTCTTGCTC 80770 36 100.0 34 .................................... TGGCGATCATGTCCGCCAAAGCGGGCGTCAAAGT 80840 36 100.0 34 .................................... GATACCGTAGTGCGCGCTAGCCTGACTGGACGAA 80910 36 100.0 37 .................................... AGGCCAGTATAAACGTCTTCATAAGCTAAAGCGAATT 80983 36 100.0 37 .................................... AATACGTGGTATGAAGATTCCAGACGATTACGCTAGC 81056 36 100.0 35 .................................... GCCATCCAAGTCGGCGAACACGACGCCAGACTCGT 81127 36 100.0 36 .................................... TCGATCAGGGAATCGAAGCCGTTCGTCCGCAGGGAC 81199 36 100.0 36 .................................... GCGTATTCCGTTCCCCGCGTCTCGACGGATACCCTG 81271 36 100.0 33 .................................... CGAACAGATACTGATGGAAATTCAATGGAACAC 81340 36 100.0 35 .................................... CGCGGGCCATGCGGCCGTCCCGTCATCGTAGTGAG 81411 36 100.0 35 .................................... ACGAGCAGTACCACAACGTTTTCGACTACAATGTT 81482 36 100.0 35 .................................... CTAAAATACACAGGAGAACAAACAGAAACATTCAT 81553 36 100.0 36 .................................... TGACCGCGAAACGCAAGCGCGTGCGGCGTGCGATAA 81625 36 100.0 34 .................................... AGTAGATTGTATTCGAGGAACCATGCGTCGCAAG 81695 36 100.0 38 .................................... GATGAAATCACGCTAGCCGCACGAATCAACACGGCCAT 81769 36 100.0 35 .................................... TCACCCCAGTTGGCGAACTTCAGGATCTTCCAGAC 81840 36 100.0 38 .................................... AACCTCAAGCTGCAGGAGGAGATTCAGCTCCTGTCCGG 81914 36 100.0 34 .................................... TATACCACACTTTAGAATGCTGGCGGATTAGATT 81984 36 100.0 39 .................................... ACAAGCGAAAACCCATACAAGGAGTAGGCAAATGAAGAA 82059 36 100.0 36 .................................... AAGCTCAATCCCCTCTCACTGTCCAAGCTGGAGAAG 82131 36 100.0 37 .................................... ACGACACGATACAATCAGGCGTATTCATTATTGAGTG 82204 36 100.0 35 .................................... GTGGCCATCGACATCGAGACCACAGGATTAGACAG 82275 36 100.0 35 .................................... GGGTGGAGGACCCTCTGGCACGATGCCAGCGGCAA 82346 36 97.2 37 ...................C................ GCGTCCGGCTCTGGCACGGACAAGGCGCAGCTCTGCC 82419 36 97.2 35 ...................C................ TTCGTCACCGGCTGTGGCTATGACGTGCTCAGCAG 82490 36 97.2 37 ...................C................ GCGTCCGGCTCTGGCACGGACAAGGCGCAGCTCTGCC 82563 36 97.2 35 ...................C................ TTCGTCACCGGCTGTGGCTATGACGTGCTCAGCAG 82634 36 97.2 35 ...................C................ TTCGTCACCGGCTGTGGCTATGACGTGCTCAGCAG 82705 36 97.2 38 ...................C................ AGGAGGTTGAACTTCGGTATCAACACCAGTCAAGCGGA 82779 36 97.2 35 ...................C................ AAGGCCGGCGGCGGTCTTTCCTGCGATTGGGACAA 82850 36 97.2 36 ...................C................ CAGGACTACGCCCGCACGATCCTCAAACCGGTTGAC 82922 36 97.2 37 ...................C................ GAGCGAAAACCCATACAAGGAGACTGTCAAAATCGAA 82995 36 97.2 35 ...................C................ ACCATCGGCTTGACGCCACAGGGGCTTCGTTTGAA 83066 36 97.2 38 ...................C................ CGCGCCAACCAGCACGGCCAGAGCGTTCAACGTGGTCA 83140 36 97.2 35 ...................C................ AGCACCCACATGGCCATTAGCCACACCGCGAAGAT 83211 36 97.2 40 ...................C................ GCTCGCCGAGCTGTCGGGTCTTGGCGAAATGCTGCGAGAG 83287 36 97.2 37 ...................C................ TAACGACACATGCAAAGCGGCCGACTTCATTGGCGTG 83360 36 94.4 35 ...................C..A............. CCCGGCGACATGCCAAGCGAAGTGCCGAACTAAAG 83431 36 86.1 0 .........T......A..CG...T........... | ========== ====== ====== ====== ==================================== ======================================== ================== 71 36 99.2 36 ATTCCTGAGCATTCAAGCTTAGGACTTCATTGAGGA # Left flank : ATCTGGTGGCATATGATATCAGCGATGATTGCTGCCGCTCACATGTTGCGAAAATTCTTCAACACTATGGAGAACGATTGCAATATAGCATCTTCTTACTGCGGGTACGTCCTTCGATGATGTTGGATGTCCGTATGCAGATAGAGAGGGAAATAGATGACTCAATCGATTCTGTTGTGTTCTGTTCTCTTGGAACCATTTCTCAAACGGAAGAGGGCTTGGATTTCTTGGGGCGCCGTGGATACGTCGATTTAGAGATACCGACAGTGATTTGAAGTTTTAGCCTAATGGTGATGTTGTTTGATAAGTAAAGAGTGTTTTGCTGTTTTTCAAGTGCGAGAGATGCATCATTGCTGCGACACACGGTGAGCGCTCGCACTTGAAAAATAGTTGTTTTGGAGCCAGTGAACTTATATTGCTTCTGTATTGCGATAGAAATGAAAGAGTCGCTCGCAAAAGCCTTTAGAATATGTGTCATTGCAAGGTCTTAGCCTATGACT # Right flank : AGCTGTGGGCGAAGAAGCGCAACCGTCTCCAGTTTTTTGGATTAAAGCCAATATTCAGAGGTCTATCCAAAATCGCTGGATGATACTGTCTTCGTTCCGTCCCGTACCGTTCACGATTTCATTCTCCATCTTTCCACCATTGCTGATAATCGTCCGTCTTGATGCTTCATTGCTCTTGTGACAGGTAAGTAGAACACGTTGCTCGCCCTGCTCTTTGCAGATGGGCAGGAGTAAGGCGAGCATCGCTTTGGCATACCCTTTTTGACGTTCCGATGGCAAAATGCTATACCCAATATTTCCTCCGTATTGCAGCAGAAAAGGGGATAGCGGACGTCTGAAATCAATGATGCCGACGAGCTTGTCATGCCTTCCGAATAGCTAAAAATACTTCCGACGGCACATAGCCTTCGCCGTATTTCTTTTTCAATCGATTATCGAAATCGATCCATTCATCAAAAGAATCCGTGTCTTCGAGACCGGCGCATCCATCGAGACTGTCG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCTGAGCATTCAAGCTTAGGACTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.20,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //