Array 1 3053437-3056588 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIWIJ010000001.1 Acinetobacter baumannii strain 5075 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 3053437 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 3053497 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 3053557 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 3053617 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 3053677 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 3053737 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 3053797 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 3053857 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 3053917 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 3053977 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 3054037 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 3054097 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 3054157 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 3054217 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 3054277 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 3054337 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 3054397 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 3054457 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 3054517 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 3054577 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 3054637 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 3054697 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 3054757 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 3054817 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 3054877 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 3054937 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 3054997 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 3055057 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 3055117 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 3055177 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 3055237 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 3055297 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 3055357 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 3055417 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 3055477 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 3055537 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 3055598 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 3055658 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 3055718 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 3055778 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 3055838 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 3055898 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 3055958 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 3056018 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 3056079 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 3056139 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 3056199 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 3056259 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 3056319 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 3056379 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 3056439 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 3056499 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 3056559 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //