Array 1 4723390-4720302 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP078515.1 Shewanella algae strain CCU4052 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4723389 28 100.0 32 ............................ GAAGTCGAATTGCTCAGCCAGTCTGATCAATA 4723329 28 100.0 32 ............................ TCCTACAAGCCGTGGCGGCACTGTTTACTGGG 4723269 28 100.0 32 ............................ ATTAGATGCACCCCTCTACGAACTGCTGAAAC 4723209 28 100.0 32 ............................ AAGCCTTGCGGTCACCGGCTACTTCCAGAGTC 4723149 28 100.0 32 ............................ ATGTTCAGCAACTGCTGACGGTGTGACGCACG 4723089 28 100.0 32 ............................ GCTTACCTTCTCCCACAACACGACATCCGTAT 4723029 28 100.0 32 ............................ ACTAATGAGAAGATAGTTTTTAGGACAGCTGC 4722969 28 100.0 32 ............................ TTGGCGGCTTTAACCACGGCCATGTATGCAAT 4722909 28 100.0 32 ............................ ATTGAGGATTTAACCGCTGCGGTAAGCAAGGG 4722849 28 100.0 32 ............................ ATTAATCATGACCCTAACCTCACAAAAGGTAT 4722789 28 100.0 32 ............................ TGGGACGGCCGGCACCCTTTCGAGCACCACCA 4722729 28 100.0 32 ............................ CTTATGAAAGCCTTCCTTCTTCTTGGTCTACC 4722669 28 100.0 32 ............................ TTGGCGCTGGCTTGGTTGCCGCGCTCGATGTA 4722609 28 100.0 32 ............................ CTGCATTTGATATCGCTGCGGCTGTGCAATCA 4722549 28 100.0 32 ............................ TTTAGGCTGTAAACACTGTTTCAATACAGGAC 4722489 28 100.0 32 ............................ GGTCATTGCTTGCTGAATGGACTTCATACAAC 4722429 28 100.0 32 ............................ AACAGGGTCAACATATGTTCCAAGCACCAAAC 4722369 28 100.0 32 ............................ AAATGCAAATCGCCGTTGAAATCCTCTGATTT 4722309 28 100.0 32 ............................ AGTAAGGTAATACTGGACTTTTGTCTCACCGG 4722249 28 100.0 32 ............................ CGCCCCAAGTAAAAAAAAGTGGCGGCCTTTAG 4722189 28 100.0 32 ............................ TTCATACTCCGGCAATTCATCGTCATTTTGCT 4722129 28 100.0 32 ............................ GTGCCAATAGATTCCAAGGTCTTGAATCTGAG 4722069 28 100.0 32 ............................ AAACACTACTGCGAGAGTGTTTGGGATGTGGA 4722009 28 100.0 32 ............................ AGACTAAATCAAAGGCATTGCTTTACATGCTT 4721949 28 100.0 32 ............................ AACAGACTTCAATCATGTCCTTAAGATCACGA 4721889 28 100.0 32 ............................ TGACAACTCCCCTGAATCGCTCAAGCGAAAAC 4721829 28 100.0 32 ............................ AACGAAGAGTCAAACGGATGGGCCGCCAAGAT 4721769 28 100.0 32 ............................ ATCATTGAATCGAACCCATCCGCTAACTGCCG 4721709 28 100.0 32 ............................ TGAAAGGGAACTTTGCACTGATCTCCACAATG 4721649 28 100.0 32 ............................ TGAAAGGGAACTTTGCACTGATCTCCACAATG 4721589 28 100.0 32 ............................ TAAAGTATCCAATCCGACCAAGCAGGAAGCCA 4721529 28 100.0 32 ............................ GTAACGGAAGCGCCAAAAACTGAACCCGTAAC 4721469 28 100.0 32 ............................ CATCGGCGAACATCCAGCATTGCTTGTTGGGC 4721409 28 100.0 32 ............................ GCCGTCACATTGCAAAATTGGGGGCGGGGAAA 4721349 28 100.0 32 ............................ ACTGGCGCGGGCTGAACTTTCAGCACCATGTG 4721289 28 100.0 32 ............................ CAACCCCTTGTAATCCGGGTTTGGCTCAATAC 4721229 28 100.0 32 ............................ TTTTTCCCAGCGTTGCCAGGTGCGAGGCTCAC 4721169 28 100.0 32 ............................ TCAATAACTTTTCGACGATTGTCACTTTTAAT 4721109 28 100.0 32 ............................ TACGGCCATTTTCTCCACTCGGGTCGGGTCAT 4721049 28 100.0 32 ............................ TGTCCAGGGCTCCAAAGTCTGGCCCATCGTTT 4720989 28 100.0 32 ............................ GCCAGAGTCTCTGATGAGTCGATGCGAAATCC 4720929 28 100.0 32 ............................ AATTCTGAAGGGAACGTGCAGCACAGAGCTAA 4720869 28 100.0 32 ............................ TGGCGATACCAGTGGCACAGGTCGAACCGACA 4720809 28 100.0 32 ............................ AGCAGCCTGCTTCAAAATGTCAGCAGTTGTTT 4720749 28 100.0 32 ............................ ATCATAAGCTGGCGGGACTGCCTCCAAATCCT 4720689 28 100.0 32 ............................ TGACAGACACCGTAGAAATCACATTTCTCGTT 4720629 28 100.0 32 ............................ TGTTGGCGGTATGCCCACCGATGCGACACCTG 4720569 28 100.0 32 ............................ GTTACTTATGAGCCGTCTCGGGGTCGGACCGA 4720509 28 100.0 32 ............................ GACCAGGACGACGCGATCATCAAGCGTTACGA 4720449 28 100.0 32 ............................ TGTATTTGCGGCGCTGGTCGCCGGACGAGATC 4720389 28 100.0 32 ............................ GGGCAAGCGCATTGTCTTGACCATTCCGACCA 4720329 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 52 28 100.0 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCGGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACAGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCCGCAAAGTACACCTGTGGATGGGCAGTTCGATTGCTACGGGCTGAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGTATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTGGTGTTCAACAGGGTAAAAATAGGTTTTTTATCCTAACCACCTGTTGTGACATTCTTTTATTGCTTTATTCTATT # Right flank : GTTCTTCTGGTGATGACCTTTCCCCCGAATTTATCACTCGGCCCCAGCAAAATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAAGTGATCTGAATAGTGGCCCGGCTCAAGGCAGCATATCCACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCATCGCTGACCGATAACTGGAAGCGTCCTGCTCTGGGTGGGCGCCATTCCAGGGTTTGTCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCTATGTGTTCATTGGCCACACTTTGGCGCAGGCTGTAGGTGACGCCCTTCAAGGGGGAGCGGATAAGCGGGGCAGTGTAGCTAACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGATGGCCAGAAGGCAAACACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //