Array 1 93915-95044 **** Predicted by CRISPRDetect 2.4 *** >NZ_LONF02000011.1 Pseudomonas balearica strain st101 QCLCmap.Vague_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 93915 29 100.0 32 ............................. ATCCCTGCCGGCTTCGTCGTGTCCTGGCTGAT 93976 29 100.0 32 ............................. GCGATATCGTTGTCAGCAATCTCGCCCTTAAG 94037 29 100.0 33 ............................. TGGTCGTGCCTGTATTCGCCGCACCTGATGATC 94099 29 100.0 32 ............................. ACGCCCCGCCACTGAAGAAGCCGGGCACACCG 94160 29 100.0 32 ............................. TCTTCGGCTTTCGGCCCGCCCTTGCACTGCCC 94221 29 100.0 32 ............................. GTCATCTCAGCCTGAGAGAGATTCGCCTTCTC 94282 29 100.0 32 ............................. CGCTGGATTGGCGATAACAGTTGCCAGGCGCT 94343 29 100.0 33 ............................. TCAGGGCTCTTGGATTGTCCAAGGGGACTCTCC 94405 29 100.0 33 ............................. GCTCGCGACGTGATCCGGTTCCGCTCCTCCGAG 94467 29 100.0 32 ............................. TCTTGGATCAAGGGCTTCATGGCTGCCGGCAT 94528 29 100.0 32 ............................. CACCCAGCGCGGCGTAGGAGCACGGAAATGAA 94589 29 96.6 32 ............................T GCTCGATGGCCGCCGCCAGCGCCAGGATGGTC 94650 29 100.0 32 ............................. CGTCTTTGCGTTATATGTTGCTCAGGAAGCCG 94711 29 100.0 32 ............................. GCGGCGAAAAGTGCGAAGACTATGGTGATGCT 94772 29 100.0 32 ............................. GGTGCTGCGATCTGCGCGGTCATCGTTGCCGG 94833 29 100.0 32 ............................. AGCCAGAGCGAGAGAGCCATGACGCTAAGCGC 94894 29 100.0 32 ............................. TCAGCGCGCCAGTCCTGCAGGCCAGCCTTGGC 94955 29 100.0 32 ............................. TAGTACCAGGACTCGTCCGTCACCTCGTTGCG 95016 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 19 29 99.8 32 GTGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : TGGGTGGTGCCGGCTACGTCGAGGAAACCATCCTGCCGCGCCTCTACCGCGAGGCGCCGGTCAACTCCATCTGGGAGGGCTCGGGTAACGTGCAATGCCTGGACGTGCTGCGCGCACTGTCGAAGGAGGCCGGTGTGCTCGACGTCTTCTTCGCCGAGCTCGGTGACGGCCAGGGCGACCGCGATCTGGCGGCGCATATCGCCCGCCTCAAGCGCGACCTGCACGACACCGACGACATCCAATACCGCGCCCGCCAGCTCACCGAAGACATGGCCATCGCGCTTCAGGCCAAGCTACTGCTCGAAGCCGGCAACAGCGCCGTGAGCGACGCCTTCATCGCCAGCCGCCTGGCCACCAGCCGCCGTGCCTACGGCACCCTGCCGCGCGGCATCGCACTGCCGCCAATCCTCGACCGCTCCAGCCCGGACTGACCGACCGGCAGGCGCGGTAGATTGCGGCGATAGGGATTTTCCATTGCCCATCAGACGCTTACGATTGGA # Right flank : GCTGACGGGCCTTTAGTCACGAGTTTCCTTGGCATACATGAAAACTTTACCTGTCCGCACGTCCAGTATTCCGCCATGGCGCGGCAAGCCGTTAGGCTGCGATATCAAATGGCTACCTTAGGTCTTGCCAGCAAACGGTGAGACACGCTTTCAGGGAGATAGAAAGTGACGGTCCCATCTTTCTTTGCTTATTGGGGAAAGGCATCCGCGCAGGGTGAGAGTGGCGAGCGCTTTCACCTTTTGCCTTTTCATTCCCTTGATGTGGCGGCCTGCGGCCAGACTCTGATTAAGCTGCCGCATTTTTCCCTGCAGCCTTTGGCTCGTGAGCTGGGCTGGCCGCTGAGCCAGGTCGAATCGCTGTTCGTGCTGTTCCTGGCACTGCATGACCTGGGTAAGTTCGCCCGATCCTTCCAAGGGCTAGTTACCGACCTTTCCCCCGATTTAGTTCCGGCAGACCGTGACAAGCTCTATACGAAGCGACACGACACCTTGGGCTGGAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 105075-107300 **** Predicted by CRISPRDetect 2.4 *** >NZ_LONF02000011.1 Pseudomonas balearica strain st101 QCLCmap.Vague_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 105075 29 100.0 32 ............................. CAGCTGGACGGCTTGCTCCGGGCGGTAGAGAA 105136 29 100.0 32 ............................. ACCAGCTCGCGCCACGATACCCAGGTAGACCC 105197 29 100.0 32 ............................. ATCGCCTCGGTTTTCTCGCCTTCGAGATTGGT 105258 29 100.0 32 ............................. CAGCTCAGGCAGCAGGGGGTGCGCGCATGAGC 105319 29 100.0 32 ............................. GCCGCGCGCACGGCGCTGTCCACTCCCTTGTT 105380 29 100.0 32 ............................. ACCATGCTGCTCGAAGAGCATGACATCGAGGC 105441 29 100.0 32 ............................. CTTGGTCGCTGGCCCTGGCTGCGTCTGACGAA 105502 29 100.0 32 ............................. GGGCGCGAGGACGTGGTGATTGAGCTGCCCAG 105563 29 100.0 31 ............................. AAAAACCCGCCGAAGCGGGTCTGGGTGTCGC 105623 29 100.0 32 ............................. CCAGCCGCACGGCAGAGCTGGAGGCAGAGAAC 105684 29 100.0 32 ............................. CCGACGAGCTTTTCCGCGAGATGCTCGAAACC 105745 29 100.0 32 ............................. CGCGGGATTGGCGATAACGGTCGCCAGGCGCT 105806 29 100.0 32 ............................. GAGGTTGGAGAGTCATATGCCCGTCCGAATCA 105867 29 100.0 32 ............................. GTTCCGTCATATCAGGTTGTCCCTGGCGGATT 105928 29 100.0 32 ............................. GGTATCGATCTGGGCAAGCGCGGCGTGAAGAA 105989 29 100.0 32 ............................. CACATGAACTTCGCGCCGGATGTGGCATGCGC 106050 29 100.0 32 ............................. CTGGCTGCGTTGCTGCCCTGGCCGCGGTAGAG 106111 29 100.0 32 ............................. CAGCCGGCATCAATGAGCTTTGACCATTGCGA 106172 29 100.0 32 ............................. GTGAAACTCACCGAGTCGCGCGAGGGTCGGCC 106233 29 100.0 32 ............................. TCCTCAGTGCGGGCGGGTGGCCGGGCAGTTGA 106294 29 100.0 32 ............................. GCTTCGCCACCGGCGCCAGCGTCTACCTGGCC 106355 29 100.0 32 ............................. CGCACTTTCTTTGGGGCCATCCCGCCGGCTGC 106416 29 100.0 32 ............................. TAGCGGATCCACGGCGACAGCAGCTCGCCATG 106477 29 100.0 32 ............................. GCGCAGGCCGCGACTCCGCTTATTCAGACTGC 106538 29 100.0 33 ............................. CGATGGTCGGCCTTGGTCTTCGCATCCTCGGCG 106600 29 100.0 32 ............................. GGCGCCATCGCAGGCGGGGCAGGCGGTTTCGG 106661 29 100.0 33 ............................. GACGGCATCGCCCGCATCGAGGCGCGCCGCAAT 106723 29 100.0 32 ............................. GCGGGCTCGTGCAGAAGGGTCAGGCCGTCGCC 106784 29 100.0 32 ............................. GTCGTCGGCGGCGAAGGGGCAACGCTCAACAT 106845 29 100.0 32 ............................. GCCGGGGGAGTGCTGGCATGAAGATCGTAATC 106906 29 100.0 32 ............................. GCCTTTTGCAGCACGGCGCGCACGCGCGGGGC 106967 29 100.0 32 ............................. GCTCGGATTTCGTGCGCGAATCCCAGGCTTAC 107028 29 100.0 32 ............................. GCCTGGGGCCAGCGGCTAAACCGGATCTTCAA 107089 29 100.0 32 ............................. TCCGGCAGGCCGAGTGTCTTGCGGTAGTGATC 107150 29 100.0 32 ............................. CGCCGCGACAGGCGCAGCGGAGTCAGCGGGCC 107211 29 100.0 32 ............................. GTGCCGGTGTTCTACCCGGGCACCAAGATGAA 107272 29 89.7 0 ..........................TTC | ========== ====== ====== ====== ============================= ================================= ================== 37 29 99.7 32 GCGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : CGGGCGCATCATCCCGCTGATCGAGGAAGTACTCGCCGCTGGGGGCATCAACCCGCCCGAAGCGCCGCCAGAATCCGTTCCGCCGGCCATTCCCAATCCGGACAGCCACGGCGACGTCGGCCACAGGGCGAAGTAATGACCTTTCTCGTCGTCGTTACCGAAAACGTACCGCCGCGCCTGCGCGGGCGGCTGGCGATCTGGCTGCTGGAAGTTCGGGCAGGTGTCTACATCGGCGATGTCTCGAAGCGCACCCGCGAGATGATCTGGCAGCACCTCGAAGCCGGATTCGAGGACGGCAATGTCGTCATGGCCTGGGCCAGCAAGAGTGAATCCGGCTACGACTTTCAAACGCTCGGCCCCAACCGCCGCGAACCCATCGACTACGACGGCCTTAGATTGGTCGCTTTCCAGCCGCCGCAACCCCCTGATCTTTAACAAAAGAACCCGGTAGATTTTTCGTGGCCGATTTTCTTCTTGTAGGACAATAGGTTACGTTTGGT # Right flank : CAAGAGGCTGGCGCCCCCGTGTCTACCTCGAGCCTCGGGCGTGTCCATGGCGGAGCGAGGCTCGATGTAGCGTTTCCATTGGCCGCCCGCAGGCATCGGCCGCGCGGTGGTGCTGGCGCGGCTACACTCGATGCGCTGGGCGGAAAACGCTGCCTCGCGGGCGTTCTTGTCCGCGGTAATTTTTCTGCCTGGCGTCTTGTGCTTAGCTGCCGGTGACGGCGTGCTCGCCGGGGCTCAGCGGGGACGGTCGACCTTGGTATAGCTGTCGAAATGGCCCGGGTCCCTAGAATGGGGTTGTGATCGGCGCGTTCCGCCAGGGGGCGGAGCGAACCTTTAAAGGCGAGCCGGGCAGGTCTGCCGCGGCACTCGGCCATACGCCGTCAGGTTATGCAAAGGGTATCGAGAACCGACCACGGACGAATTCAGAACAATTTCAGAGGTGTTGCATGGCAACGGATTTGAGCAAGTACATTCGCAATGCTGCGTTCATCGACAAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //