Array 1 45125-43711 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACNMN010000001.1 Boseongicola sp. H5 Scaffold1_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 45124 36 100.0 30 .................................... GTGGGTGTCACTAATTGCATAGAAGAACAA 45058 36 100.0 30 .................................... GCCCGCCACAATCCATAGATATCGCGGGTC 44992 36 100.0 30 .................................... TCGAATATCGCCAGATCGCCCTCCGCAGTC 44926 36 100.0 30 .................................... GCGTCCTGAAGGCGCTTGTCGAACGCCGCA 44860 36 100.0 29 .................................... TGACGTCTGAGAACATGGATACCGAGGCC 44795 36 100.0 30 .................................... AGTCATGCGCCGAACCACGGCAGAGATCGA 44729 36 100.0 31 .................................... AGCGGGGGCTGGCGGTTACTTCTTGCTTCTC 44662 36 100.0 29 .................................... GCTGATAGGTGCGCTGCATAGTCGTTATC 44597 36 100.0 29 .................................... GCAATCGGCTTGATCCGGTCATTGCAGAA 44532 36 100.0 29 .................................... CGCTGCCAGGAGAAACGGCCACGTGGTTG 44467 36 100.0 29 .................................... GCCCGTTCATCGTGCACCAGATACGCACA 44402 36 100.0 30 .................................... GGATCGGGGCGCGCAACGGCGCGCGTTGAG 44336 36 100.0 30 .................................... CAGTCCGGAGCGGAGCAGATGGAGTGCGAC 44270 36 100.0 30 .................................... GGTCTTCCTGCGTGGCGCCCTGATCAGAAC 44204 36 100.0 30 .................................... GGTCGAGAGTGGCGCACGCGCGTCGGCGCC 44138 36 100.0 29 .................................... CATGCGACCGAGTTCCGCTTTGTGTCGGG 44073 36 100.0 29 .................................... AGGCCGCCGGGAATGTGGACCTGTACCTA 44008 36 100.0 29 .................................... CGCTTGGTGAGTTAGGCGTTTACCGCACA 43943 36 100.0 30 .................................... CTCTCAAACGAAGCCTCCCTGTGTATCCGC 43877 36 100.0 30 .................................... TTGGGATGCGGAGGCCTGATGTCGTTCATC 43811 36 100.0 29 .................................... GACGGCGTGAAGATTCCGCATCTCATGCC 43746 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 22 36 100.0 30 GTTGCGGCTGGACCGCGAATTTTGAACAGCTACAAT # Left flank : TACACCTTAGCTCACTGTCCAGTTTTCCGAGACCAGCTCACCTATAGTAGCCATTGACTTCGAACGCCCAGTACGTGCACTCGTCATGGAACTGAATCGTTAGAAAGCGCCGAATGTTAGAACGCACTAAACCTGTTGCCGCCGCTATTTGGAAACGGTTCCGAAGCTACCCGCTCTTCATACAGCTTCTTTTGGTCGTACCTATCCTAAGTGCCATGACACTCACATTGTTAGTTGGTAACATGGGACTGGCTTTGATGGGCACAGCTGTCGCAATAAATTCGGTTGTAGCAGGTTGGATTGGTGGCGTTCTTGTTGTTGTCTTGGGCAAGGCGGGCATCATTGTCGCCAAAGATCACAAGAAGAAGGGCTGACTTTTCCGTGAGGTAGAGCGGCCCAAAGCCGACCTTGAACGCGACCTCGGAATTCTGCAGGCGCAGTCCTCAATGCGGACATCGGTGCCTACGGTTGTTTGCGAAAACAAGCGGGCGCTTCATTGC # Right flank : AGATCGCCCGTTAAGCCTTTGTTAGACATGAAGCTTAACGGGCCCCTATTCGTAATTTCCACAGCGAATCGCATCAGAACATCACCAGTTGCTCCGGATTCTTGCGGGCGCGTTTGCGGCCCTGGTCCGAGAAGTGAATGATATCACGATATTGGCGGTCGGTGAAGTTCAGGATCTGGACGTCCCCGGCATCGGGCAAATGCCGTTCGATCCGGTTGACCCGTGTTGCATAGGCTTCCTTGCCGTTAACGAACCGTGCATAGACGGAAAACTGGCTCCGCTCAAAACCCTCGTCCAGCAAGAAGTTGCGGAATGCCGTCGCTGCCTTGCGTTGGGGCTTGGTATCAGTCGGCAAATCGAACATCACAAGTATCCACATCAATCTGTATCCTGACAAATAGGCAACGGTATGGGTCATGCGCCTAGCCCCGCGAGCGTCAACGCATCGGGCGGGCGCGGCAGGGCAAGGGCAAGTTTGCCGGCCTCGAAACTCTGCCCCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGCTGGACCGCGAATTTTGAACAGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTGCGGCTGGACCGCGAATTTTGAACAGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.00,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 297967-297572 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACNMN010000002.1 Boseongicola sp. H5 Scaffold2_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 297966 29 100.0 32 ............................. ACCTACAAACGTCACAACGCCGACGCCGATCC 297905 29 100.0 32 ............................. CAGTACGCAAATCTGAGCCGTCTTTCCAGCGG 297844 29 100.0 32 ............................. GCCACCTGCATGGCAAGATCGTTTGGATCTCC 297783 29 100.0 32 ............................. CCGTGCGTGTTGCGAAGCCAGTCGAAGGACGC 297722 29 100.0 32 ............................. CGGAAGCGCGATTTGGCAGGAGGCAGAACGAT 297661 29 100.0 32 ............................. TTAAAGTGACAGCGCCTTTTGCCAGTGCCAAC 297600 29 75.9 0 ..A..........A..TT...GC..T... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 96.6 32 CTGTTCCCCGCACCCGCGGGGATGAACCG # Left flank : GCGGTCTGTTATCGAAGATCATCCCGCAGATCGAGGAGGTGCTCTCGGCCGGTGACCTGCCGCGCCCCGCGCCGCCCGCCGACGCGCAGGGCCCGCAATTCGAGGACGATCAGGATGGCGATGCTGGTCATCGTGGTTGAGAACGCGCCGCCCCGGTTGCGCGGCCGGCTGGCGGCCTGGCTTCTGGAAGTGCGCGCGGGCGTGTTCGTGGGCGACTATTCCGCCCGGACGCGGGACCGGATCTGGGAGCAGGTCGAGGCAGCGATCGGCGAGGGCGACGCGGTCATGGTCTGGAAGGCGCCGACCGATCAGGGCTTCGATTTCGCCACGGTCGGACGCAACCGGCGGATGCCGGTCGATTTCGACGGTCTGAAGCTGGTGTCGTTCTTTCCCGTGGAGCCCCGGAAATGACCCTTTCGCAATGTCGAAAAACGGGGCAATCTGCCGGTAGGCTCTTTGACATTGCGAATACCCTTTTGGATCAGTGAGTTCCAGCCAGA # Right flank : CCGCCTGCTGCCTGCGAACGCCCATCCGCCGGCCAAAGGGCGTGGCGCCCACGCGCTCAACCGCCATGAAACGATGGGATCATTCGTCTCTGATGCGCTGGCCGCCTGCATTGCGGTTTTGTCGGGGAATGTGGACGAAGAGGAACCGATGGCGGCGTGAGGATGCAACAGGGCCCGGATCGGCTCTTCGCCTAACGCCATGATGAGCGGTAAGGCGGACAAAGCGTCCATCGGAGCGCTCTCTGCGTCCGGCTGAGGCATGCACGCATCACCTGTCCAGGTAGTCTCGAAGTCTGTACCAATTCACGCCAATGGTGCCCGCCACAGCATGAAGACGGTGGAACGGGAGCGTGGGCACCGCATTGATCATCGGAACTGGCATCGGCAAATCATGCGCAAGATGGTCCGCAATTGCCTTGCCAAGCGCGACGGACAAGGCCACCCCGCGGCCATTGAACCCCGTCGCCAGGATCAGCCCCGGCTCCGGCTTGCATAGCCGG # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCACCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCACCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 35048-34714 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACNMN010000019.1 Boseongicola sp. H5 Scaffold18_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 35047 29 100.0 32 ............................. GTTCTCATGCGCTGGTACAGGCGATGTGTCTT 34986 29 100.0 32 ............................. GCTATGCAGACCTTGTGTCCAACTCCAACGCC 34925 29 100.0 32 ............................. CCCTCGAAATGGACGCCGGATTTTTCAATCCA 34864 29 100.0 32 ............................. GCAATGCGGCCCTGCTCAGACAACTGAAATCC 34803 29 100.0 32 ............................. TGGCCATCCGCGATGCGTTTCTATTTTTCTCG 34742 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 100.0 32 CTGTTCCCCGCGCCTGCGGGGATGAACCG # Left flank : GGCCGCGGCCTCCGGCGTCATTCAATACGCGCTGGCTTTCTGGCTCTACCTTTTCGCTTTGCAGAGCCTGCCCGCCAATGTCGCCGGTTTCTGCCTGACACTCATCCCGGTCTTCGGCATCGCTGCCGCCTACGCCTTCCTGGGCGAGGCGCTGAGCGGAGTGCAGTGGCTTGGCGCTGCACTGATAATCGTTTCAGTGGCGATCGTGTCCCGCCTGCAAGGGGATTGATGTCGCCCCTTGTGGCATAGCGCCGTGATGGAGCCGCGCCGTCTTCGCATCTGTCTGTCGAGCCCGATGCGGTGAGCTCTCCGCGCGCGGCGGCGGTGATGGGCAGCGGCCAGCCAGCCGGTTCCCGTCGGATGGCAGCGCCCGAACCGGTGCCGCGCCTTCCGGAGGAGGCCCTGAAATGCCCCTTTCGCAATGTCGAAAAACGGGGCAATCTGGCGGTGCGCTTTTTGACATCGCGAATGCCCTTTTGGATCAGTGAGTTCCAGCCAGA # Right flank : GGATTCCGTTCCGGTGCGAATGGCGCGGCGGCGGCTTGTCGACGGCGTCCCCGCCGGCCACAGGGTCAGGCGGGCACCGGCCATTTCTCCTCATGATAGGCGCTGTCCCAGAACATCCATTCATATTGCGCGGAGCGTTTGAAGGCGTTCAGCATGGCGACACGGCGGGCTTCGGTTGACCGCTCCGCGGCCTCGTCGGCGATGGCGATCACGGCCTCGACGGACTGGCCGAAGGACGGATCGCTATAGGTGTCGATCCAGGCCCGATAGGGGTTGTCGGGGCCCGTGTCGGCGGCGATGTGATTGCCCACGTCCCAATAGATCCAGAAGCAGGGCAGAACCGCGGCCACGAGTTCCTCGTAGCTGGCCTGATGGGCCACGGTCAGAAGGAAATTCGTGTAGCCGTAACAGGTTGGCGACGGTTCGAATTGTGCGGCCTCGGTCGGGGCGATGCCGAATTTCTCGAAAAAGCCTTCGTGGAGTGCCCTTTCGACGATCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCCTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [25.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //