Array 1 183531-182402 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCML01000001.1 Pseudomonas aeruginosa strain E82A isolate AES-1R IPC1257_1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 183530 29 100.0 32 ............................. GCACCCGTGCCGATCATGGCGGCGGCACGTTT 183469 29 100.0 33 ............................. ACGCGCCAGTGGTCGCCGCCGCAGGTGGGCGAA 183407 29 100.0 32 ............................. ATCACGTTTCCGACCGGGGGAAGCTGTCCAGT 183346 29 100.0 32 ............................. TCGGCCTGTACGACGTTGACGGCCAGTTGCTC 183285 29 100.0 32 ............................. CGGCTCATTGCGTTCGGGTGGACCGTCGAACA 183224 29 100.0 33 ............................. GCGCTGGGTAACCTACGCGACAACAGCGAGTTC 183162 29 100.0 32 ............................. CCTCAATGCGTCGCCCTCCCGAGAGCGACCGA 183101 29 100.0 32 ............................. AGTCTTCGTTTGCTGAGATCAAGGCGGCGATC 183040 29 96.6 32 ..............T.............. GAGTTCGAAAACGGCCATCACACATTCCTCCG 182979 29 100.0 32 ............................. GTCAAGTACGCGAACCTCACGACCGGCGAGGT 182918 29 100.0 32 ............................. GCACTCCAGGGCGAACTGGACGGTATACGGCG 182857 29 96.6 32 ............C................ GTAGTCCAGTGGCATCGACAGTTCGGCCAGGT 182796 29 100.0 32 ............................. AAACATCGCCAACCGCGTCAGGTGCCGCGCCC 182735 29 100.0 32 ............................. TCAGGCGACTGCTTGATTTCATCGAAGGTCAG 182674 29 96.6 32 ....G........................ CCAGCGGCCTTGCACTTTGCCAGAGAGTTGTT 182613 29 100.0 32 ............................. GCGGCACGCCTGGACGTGCTCCAGGACATCCG 182552 29 100.0 32 ............................. TTCTCGTTCTACAACAGCACGAACGGCGGGGC 182491 29 96.6 32 ...........A................. CAGGTGATCTGCGAGCTGCCGGCGTAGCCGAA 182430 29 96.6 0 ...........A................. | ========== ====== ====== ====== ============================= ================================= ================== 19 29 99.1 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TGACCCGCATCATTCCCACCATCGAAGAGGTACTGGCCGCCGGCGGCGTGGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGCCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGTCACAGGACGCAAGGGTGAGCTTCCTGGCCGTGGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATGCTGTACGGTAAGT # Right flank : TGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGTCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGAGAGACCGGGTTGCTGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 193160-192704 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCML01000001.1 Pseudomonas aeruginosa strain E82A isolate AES-1R IPC1257_1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 193159 29 100.0 32 ............................. AATCGCAAGCGCATGGTGACCGGTTATCGTGA 193098 29 100.0 32 ............................. GTACTGCTCCCGAGCCTGCTGCCAACGGTAGT 193037 29 100.0 32 ............................. CCGAAGCGCCGCAAAGTCGTGTTCAAAAGCCC 192976 29 100.0 32 ............................. GCGGCAGCCTCCCTGATCGCGTAGAAAACGCC 192915 29 100.0 32 ............................. CCGAGATGTGGCGCCGAAACGAGCGCGAGCGC 192854 29 100.0 32 ............................. TCATCGATCGTGGCGGCTGCACTGGCTGCCTG 192793 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCG 192732 28 79.3 0 A..........A..C.....-..A....T | C [192723] ========== ====== ====== ====== ============================= ================================ ================== 8 29 96.1 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTCGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACTGGCCGCGTCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGTGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTCGTATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGAATGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : GTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCACGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTGATCACCAGTGTCAGCCGCCAGTTGCCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTAGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGTTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGTGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGTGAACAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTCA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //