Array 1 14799-12191 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJDQ010000011.1 Aliivibrio sp. SR45-2 NODE_11_length_96666_cov_34.7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 14798 28 100.0 32 ............................ TCTAATATGTAATCGACAACGCCAACATAAGG 14738 28 100.0 32 ............................ TGAAAGCACTAAAATTAAAGGTTTCCCCCTCA 14678 28 100.0 32 ............................ GGCACTGGAGAATGAATCATCCATGTTTGACA 14618 28 100.0 32 ............................ TTATGGCTTGCTTGATAACCCAGACAAAATAA 14558 28 100.0 32 ............................ AATCAGGGTGTGTATCACTTTCTTGATTGTCG 14498 28 100.0 32 ............................ TTAGTGGTAACAAGTGAGGGACGGCCTAACTG 14438 28 100.0 32 ............................ TTGCGCCGCATCGATACCAGGTAAATCATCCA 14378 28 100.0 32 ............................ TCTTAATATTTCTCTTATCGTCGGGAATGTTA 14318 28 100.0 32 ............................ GATTACCGCCATGTTTGGTAATTGCTATGTTT 14258 28 100.0 32 ............................ TCATCAAAAAGACCAACTTCGCGAACAAACCA 14198 28 100.0 32 ............................ AAACGGACAAATAGAATATAAACCAGCATGAA 14138 28 100.0 32 ............................ TATAAAAAAGCATCGCTCGCCTTTTACTAGAA 14078 28 100.0 32 ............................ TGTTACTGACTTGTATTCGGCGTCTTTGTATG 14018 28 96.4 32 .....T...................... ATCACTATCACAACCGTCCTCATCAAGATCAA 13958 28 100.0 32 ............................ GATCCCTGTGCCTGTTGGTTATCAACCTGAGA 13898 28 100.0 32 ............................ TGAATAGAGTAAAAACAACAAATGCCCCTTTG 13838 28 100.0 32 ............................ AACAAGGAAGATGAAGCAGCCTTTAATGATGT 13778 28 100.0 32 ............................ AAAAGGAAATATTGCAGTTCATCATTAGCTTT 13718 28 100.0 32 ............................ TGCTTTGATTAATTTTATTGATGTGGCTTTAC 13658 28 96.4 32 .................T.......... GTAAGGGGTTATCGGCTCATTTGGATATATTG 13598 28 100.0 32 ............................ TGACAGGTAATTAAAGCTAAAAGTAATATGAT 13538 28 100.0 32 ............................ ATAACATGGTATAAATAATAATTAGAAATCAA 13478 28 100.0 32 ............................ TCAAAGAATTAAAGTGCTGATTGCCCGTAAAC 13418 28 100.0 32 ............................ ATTAACGGAAACCCAAAAGGCGTTGTTTACTC 13358 28 100.0 32 ............................ AGTACTGACTGTCGTCTCTGAAATCCCAATCG 13298 28 100.0 32 ............................ ATTGCGATATTGTACAATGCGTCACTCAAGCC 13238 28 100.0 32 ............................ TTTATTGCATTCAAAATATTACCTTCCTTATT 13178 28 100.0 32 ............................ ATTACTATCAGTTAATATGGTGTTTATTGATA 13118 28 100.0 32 ............................ AAGAGGAATATCAATAAAGACACATCGATCGG 13058 28 100.0 32 ............................ ATGCTAGGCGGTTGTACTCTTGCATAGAGATC 12998 28 100.0 32 ............................ CTCCTGATGACGTACTAATGACGCTATTTAAC 12938 28 100.0 32 ............................ TTTTTGATAAAAAAAAAGAAAGCAGCAGTTAA 12878 28 100.0 32 ............................ TTCAAAGGGCATATCAGCTTTTGGATCAAAAT 12818 28 100.0 32 ............................ CTGAGAATTTTGCAAGAGAATGGTTAATTTCA 12758 28 100.0 32 ............................ CACCTATAAAAAAGTAAACCATGCTTTTTAAT 12698 28 100.0 32 ............................ GCAACTTGGGATATGGTGCTTAATGGGGTGAC 12638 28 100.0 32 ............................ CGGCCCTGAGAGCCGGCATAAAACAAGCGGCA 12578 28 100.0 32 ............................ TTGGGAATGGACCATAACATATCATCAAGATC 12518 28 100.0 32 ............................ AGTAGACGCACCAGTTTCACTGTCAATAGCGC 12458 28 100.0 32 ............................ TGTCGCCACATCTTCACCACGGCTGGTTAACT 12398 28 100.0 32 ............................ TATGCGTGCCGTAAACTTCAAGCACTGGGAAG 12338 28 100.0 32 ............................ TAGCTTGAGGGATATTAGATAATGATTACAAA 12278 28 100.0 32 ............................ AATCTAACTCTAAAACATCGAGCTTAGTTAAA 12218 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 44 28 99.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TTTAAAACAGTTATTTGACTTAAATTGGCTTAAAGGTTTACGTGATTATTGCACTCAAACATTAACTTTAATGGTGCCAGAAGAGTGTCAATATCGTTGCGTAAAACGTAAACAAGCTAAAAGTGCGGACAATAAACGCAAGCGTTCTATTGCTAAGGGTTGGCTTAGTGCAGAAGAAGCGACATTGAAAATTGGCAATGAACAGCAAACATTGCTGAGCTTACCATTTGTTCAATTAAAAAGTTCATCGACAGGGCAGGTGATGAAGCTGTTTATTGAGCATGGAAGTTTGCAAGATAAGGAAGTTGCAGGGCAGTTTACTCGTTATGGGTTAAGTTCATTGGCAACGGTTCCCTGGTTTTAACCAAAAATACCAAAAAATTGCTCTTTAAAAACGAGTCAATAAAATCAGTAAGTTACAATAGGTATAAGAAATTAGGTAAAAATGGGTATTTTTACTTATCTACTTGTTGTAACTTATTTTTGTGCTGATATTCTAT # Right flank : GCGCACCCTCAAGTGAAAACACGTATAGTTTGAAAGGGTCATATTTCGATGGAAGAGTTAAATAAATGATAATAAATAGGACGGGGAAAACTAACCCCCCGGCTATCGTTTAGGGTGATTAACATCTCGTTGAGCTTCATACTGCAGAAATCGAGAAAGCCTATATACAAACTTGTTTTTCTAAACTAATAAATAAAGGTTTAACCAACTTGGCTTCATCTTGGTAACGATTACGTGTGTCCCAAAGATCAACTGAGTGCTGAATGTTCAACCAAAACTCTGGGGTGTTACCAAAGGCGGCCGCTAACTTTATTGCAAGGGGTGCGGTTAAAATCCCACCATTAAGTAAATTGCTTACCGTGTTGCGATGAACCCCTATCGCTTCAGATAATGCTTTCGATGTAATGTCCATTGGTTCTAAGAATTCAATCTTAAGCATCTCACCAACGCTTACTGGGCGGCGTTTTGTTTTGCGCATACACTTACCTTAATACTTATGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //