Array 1 2425423-2420893 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGXFC010000001.1 Modicisalibacter tunisiensis strain R2A 31.P NODE_1_length_3534509_cov_53.958118, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2425422 28 100.0 32 ............................ AGAAGCGCCGGGCTCACGAGCCCGGCGACAGT 2425362 28 100.0 32 ............................ AGTAGCCGCCGACGTAGGGGTAGTACTCCCCG 2425302 28 100.0 32 ............................ AGTAGCGCCTCGATCGGCGGAAGCTGGGAGCG 2425242 28 100.0 32 ............................ TTGTAGCGAGCCGGGGTGATGTAGCGCATCCG 2425182 28 100.0 32 ............................ TTCGTGTCGCGGTTCAGTGCGCGGGCCTGCTC 2425122 28 100.0 32 ............................ GGGGATCTCGATGTGGCTGATCTCGCACTCGG 2425062 28 100.0 32 ............................ GCAGTAGCAAACCCGCCGAAAGCCGCTTGATG 2425002 28 100.0 32 ............................ TCGTGCGAACTCATGTCCTCGAAGCCGTCGAT 2424942 28 100.0 32 ............................ ATCAGGCCGGTGCCGGTGATCGTGCGAGTGAT 2424882 28 100.0 32 ............................ TTGGTCTAAGCCGCCATCGGCACCAGGGCAGC 2424822 28 100.0 32 ............................ TTGTCTGCCCGAACTGCGAGCAGGAAGTGCCG 2424762 28 100.0 32 ............................ TTTTCAACTCTCCAGTCCGGAGCGACACATGG 2424702 28 100.0 32 ............................ GGACACCGTTTCCGGCTCCCAGCGTCCCAAGG 2424642 28 100.0 32 ............................ GATCACGCTCGAGGCGCTGGATGGATTCGCTC 2424582 28 100.0 32 ............................ TGTTCGATTTCGGCGTCAACTCTGGGCCGGCG 2424522 28 100.0 32 ............................ TGGCACTCCATCAATCCGTCGGCGCGCATTAC 2424462 28 100.0 32 ............................ TCGGTCTTGTTCATCTTCCCGGCCTTCATGCG 2424402 28 100.0 32 ............................ TCGACGGCCATGCGCTTCACGTCGCTGCCCTG 2424342 28 100.0 32 ............................ TTGGCCAGCAGGCCTGCCAACTCCGGGTTGGC 2424282 28 100.0 32 ............................ AAATGGCAGGCACTCAAGGACAGCGTCACCGG 2424222 28 100.0 32 ............................ ACTGGCGTCGGCAGCGACGAAGCATCTTCTGC 2424162 28 100.0 32 ............................ GATTGTCGAAATCGATAATGCTGTCGTACAGC 2424102 28 100.0 32 ............................ TCGACGTCACGGCTGCGCGGTGTCTTGGCGGC 2424042 28 100.0 32 ............................ TCGAAGAGCGCCTGATCAATCTGCACAACCAC 2423982 28 100.0 32 ............................ TTGGCCGCTTCGTCACTGGCGTTGCCCAGCGT 2423922 28 100.0 32 ............................ ATTGGCGTCGAGCTGCTCCTGCACTTCCTGCA 2423862 28 100.0 32 ............................ AAGGAGTACGGCCTGGACGTTGCGGACGCGGG 2423802 28 100.0 32 ............................ ACTGGTCGCAGAAGGCCAAGTCGGCGGCACAG 2423742 28 100.0 32 ............................ AGTCGGCAGTGCTCGATGAGCCGATCGCCACC 2423682 28 100.0 32 ............................ TGACCGGGGTCCTGGTACGTTCCTGGGTCACC 2423622 28 100.0 32 ............................ AGAATCCGGCGTCTGGTCGGTCATCTGCGTGC 2423562 28 100.0 32 ............................ AGATACACGGTGGCCAGCGTGCCCACCGTCGT 2423502 28 100.0 32 ............................ TTTCGCGCCTTCAACGCTTCCTGCACCTCGGG 2423442 28 100.0 33 ............................ CATCCGGGTCGACGTAGTCGAGGCTGTCAATGG 2423381 28 100.0 32 ............................ TTGGCGATCGGGTCGGAGTCGATGGCGAGCTG 2423321 28 100.0 32 ............................ AGAATCCGGCGTCTGGTCGGTCATCTGCGTGC 2423261 28 100.0 32 ............................ AGATACACGGTGGCCAGCGTGCCCACCGTCGT 2423201 28 100.0 33 ............................ CATCCGGGTCGACGTAGTCGAGGCTGTCAATGG 2423140 28 100.0 32 ............................ TTGGCGATCGGGTCGGAGTCGATGGCGAGCTG 2423080 28 100.0 32 ............................ AGCACCGATCCACGACGATCGGTGACACCGCC 2423020 28 100.0 32 ............................ AATCATCCGCAGAGACCAATCATTTACAAAAC 2422960 28 100.0 32 ............................ CGAACTCGGCAGCGATCTGCTGCGTCTGAGTC 2422900 28 100.0 32 ............................ AGTTCGCACTATCTGGCTATATCGTCGGTCGA 2422840 28 100.0 32 ............................ TGAACGCCTGGGGCCTCGCCTTGCAGGTACTC 2422780 28 100.0 32 ............................ GTAAGGACAGCAACATGAATGAGAAGATCCTG 2422720 28 100.0 32 ............................ TGGCCACCACTTGGACCCACGAAAGCGGCGCC 2422660 28 100.0 32 ............................ ACACAGCTTCGTCAATAGCGGCATTGACTTCA 2422600 28 100.0 32 ............................ ACCACGCCGGGTTGCCGGCTACGCTCGTGCCA 2422540 28 100.0 32 ............................ TGCATCTGGCTGATTGGGCGGTTGCGCCGGCA 2422480 28 100.0 32 ............................ ACGTATCGCGGCATCGTCGGGCTGTGGGGCAA 2422420 28 100.0 32 ............................ GAGCAGCGCTGGCAAGATCTCGAAGCCTGAAC 2422360 28 100.0 32 ............................ AGCAGAGCGTGCGCGACATCCTGACGACCCCG 2422300 28 100.0 32 ............................ TGAAACTCCAGGTTGCTGAGGTCGGCCATCTG 2422240 28 100.0 32 ............................ TGTAGCAGCGAGTCGAACGCGGCCCGGTTGTT 2422180 28 100.0 32 ............................ TTGGTGCGCTCGAAGATGACGCGGTTGTCGCG 2422120 28 100.0 32 ............................ TTCCAGCCGGGGGAAACCCGCGCCGTCACCGC 2422060 28 100.0 32 ............................ ACCAGGACGAGGATGACGAGGGCGGCGATCAG 2422000 28 100.0 32 ............................ ACCAGAGGCGGCGATAGTTTCAGTCACCCCGT 2421940 28 100.0 32 ............................ AGTAATCGAGCCCACCACGATCGACGCTGCGC 2421880 28 100.0 32 ............................ TGACCCGCACGCGCTTGCCGAGCCGTGGGCGA 2421820 28 100.0 32 ............................ ATGTCCATCGGCTCACGCTGGTACGGCGCATT 2421760 28 100.0 32 ............................ GTCGATCGGGCAGATCGGTCTCTCTCCGAAGA 2421700 28 100.0 32 ............................ CGCAAGCGCAAGACTAGGCGCAAAGCCACCCG 2421640 28 100.0 32 ............................ AACGTGATGAACGTGCCCGGTCGTGTCGTCAG 2421580 28 100.0 32 ............................ TGTGAGACCTGCCGGTTGATCAAGGACCGCGA 2421520 28 100.0 32 ............................ AACGTGATGAACGTGCCCGGTCGTGTCGTCAG 2421460 28 100.0 32 ............................ ATGAACCTATGGTTTAGCGCAGGTCGCTACCG 2421400 28 100.0 32 ............................ GGGCATCGCGCCTTGCGCGATGCCGCCAGACC 2421340 28 100.0 32 ............................ AAGCGCGACGACACCAAGCCGGGCGAGCCAGA 2421280 28 100.0 33 ............................ CTCCAGGATTGTCCGCCACCATCGACCACCCGC 2421219 28 100.0 32 ............................ TGTTCGCCGGGGGATAGAACGAAAACACCTAC 2421159 28 100.0 32 ............................ AGCCACCAGCACCAACGTCGGCACACGTCAGC 2421099 28 100.0 32 ............................ TGTACGCGCTCTCTGACGTACTGCGTCGCCCG 2421039 28 96.4 32 .....................C...... AGCTCACACAGCACGATCCGCGAGGCCGACAG 2420979 28 100.0 32 ............................ GATCCACGTCATCGAGGTCGACGCCTGCAACG 2420919 27 82.1 0 .....................-.T.CTT | ========== ====== ====== ====== ============================ ================================= ================== 76 28 99.7 32 GTTCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : CGCGCCTCGACCAACTGATGGCGACGCCGTGGCTAAGGGGAGTCGGTGAACTCGTCGACTGCAGCGGTATCAGCACGGTGCCTTCAAAGGTGAAGCATCGCACGGTACGGCGCAGGCAGTTCAATACTGGCAGCCCGAGCCGCGCGAAGCGCTATGCGAGGCGGCATGATATAGCGCAAAGCGAGGCCCAGGAACTGCTCCGTGCGCCGGCAGAACGTCGTATCGAGCTGCCCTTCATTCAGGTTGGTAGTCGCTCCAGTGGCGAGCGCTTCGCGATGTTCATCGAGCACGGCCAACTGCAAGGCCAGCCAACGACAGGGCCGTTCAATCACTACGGCCTCAGCAGGGAGGCGACCATCCCCTGGTTTTGACCCTTTTTTCAGGTGCTTATAGAGTCTCTTGTAAATCAATGGGTTACTGGCGCCTCTCTGAAAAGGGAGGCGTCGTTCTATCAGGCTATTGTTCTTTAACAATCAAGCGCTTAAATTGGGTGCGTTCTA # Right flank : ATCCTTCCTTCTTCCCCGGCGGCTGAAAGGCCCGCTTGTCGTCGGGCAGGCGCACCATGTCGCCAAGATTCAGCTCGCCGAGCGACTTCATGCGTTCGCCGCTGTCGGGGTCGATCAGCGCGACAACCTCGCCGATGCTGGTGGCGTCGCGGTAGGCCTCGACGCGCACGCGCACGCTGACGCCGCGGTAGCGGCCGGTGAGGATGCTGCCGGGGTGGGGCTCGCCGTAGTCGTTGGGGTCCTTGGCGTAATGCGCGCTGACGCTGCCGGCGCCGGGGGAATCCCATTCGATGTGCTTGTGCATGAAAATCTCCTGTTGCGGGATGAAGTTACCGTCAGGGTAGCGCGCCAGGCGTGGCTCGCCCATGGGGTGGCGGACATTCGGTCATTAAGCCAGTGTTAAGACGAATGCGCTGTGCTGGGGTAGCGAATTGACGCTAACGGCGTGGCCGTCCGGCGGCCATGCCTCGGTAACGGGAGGTACCCGATGTCGATGGCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2491961-2497033 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGXFC010000001.1 Modicisalibacter tunisiensis strain R2A 31.P NODE_1_length_3534509_cov_53.958118, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2491961 28 100.0 32 ............................ TCGCGGAACTGCGCGCGCGGGGCGAGGATCCA 2492021 28 100.0 32 ............................ ATTCGGCGCGCTCTCGCCGGTGCTGGCCCAAG 2492081 28 100.0 32 ............................ TTGTCGCCGATGTGGGCCTCCATGATGCGCAG 2492141 28 100.0 32 ............................ TCGACGCCGTCGAGTAAGAACGCGGGCATCAC 2492201 28 100.0 32 ............................ GGATTGCCTGACACGCTCGTGCCGCGCTTGTA 2492261 28 100.0 32 ............................ TTATCCCTCGGGGCGGGCGTCCTCGCCGCAAG 2492321 28 100.0 33 ............................ CTGGGCGATTGCGCGCGAGAAGATCTGATTGAT 2492382 28 100.0 32 ............................ GAGTGGCGCCACGCCTCGCAATCCCGCGTCGG 2492442 28 100.0 32 ............................ CGATGACCGAGAGCAGGTTGCCGGCGGTCGCG 2492502 28 96.4 32 A........................... CAAAGGCCGACATGAGGCGCGCGGCTCCGTGG 2492562 28 100.0 32 ............................ AGTAGCCGCCGACCAGGGCGGCGAACCAGAGC 2492622 28 100.0 32 ............................ AATGCCCGGCAGCACCAGACGCACACCCAGCG 2492682 28 100.0 32 ............................ TGGCAGTCATGTGCGTGGTGGCTGCCGGTTTC 2492742 28 100.0 32 ............................ TTGAGCCACGGAGCCGCGCGCCTCATGTCGGC 2492802 28 100.0 32 ............................ TTGATCTGTCCCATCAGGCCGGTGCCGGTGAT 2492862 28 100.0 32 ............................ TCGTGAACCGCTGTGCGCACCGCTTCGTCGAT 2492922 28 100.0 32 ............................ CTGTCCGAACACCTGATTGACCTCGCGGCCGG 2492982 28 100.0 32 ............................ ACTCGGTGGACCGGGCGAACTCGGGGTTGCTG 2493042 28 100.0 33 ............................ CTTCCGGCAGCGCGCATCTATGATCGCCTCGCA 2493103 28 100.0 32 ............................ CACCACGGCGTCACGCAGTTGATCGTGCGTCT 2493163 28 100.0 32 ............................ ACGCTGGTATTGCCGGACTTCCGGTTCCAGCC 2493223 28 100.0 32 ............................ TTTTCCTCGGGGTGCTCCTCGAGCCAGGCCCG 2493283 28 100.0 33 ............................ ATCACGCAGGTTATCGACGACCCTTTCCAAGGG 2493344 28 100.0 32 ............................ TGGAAGCAGGGGCGGTGATCAGCGCTGTGGAG 2493404 28 100.0 32 ............................ ATCGGCATCGATGTCGCGGGTCACGCAGCACA 2493464 28 100.0 32 ............................ GAGATCAGCAAGACGTGTTACACGCAGGCCAA 2493524 28 100.0 32 ............................ TCGACGATCTGGATCACCCCCTCGTCGCCGAC 2493584 28 100.0 32 ............................ TGGTCGAGATGCTCGCCTTCCGGCTTGCGGCG 2493644 28 100.0 32 ............................ TTCGCCCTGAACATCCTGCGCGCCTGCTGCGT 2493704 28 100.0 32 ............................ TGATAGTTCGCAGGGGCCTGCAAGGAGTCCGC 2493764 28 100.0 32 ............................ GACCCGAAACCCTAGCGGCGCCAGATGAGATC 2493824 28 100.0 32 ............................ TATGCCGAAAAAAGCCGCTCGAGTGAGCGGCA 2493884 28 100.0 32 ............................ TGGCTGATCTTGTGGCCATCGCTGTCCATCTC 2493944 28 100.0 32 ............................ ATGCCTGGGCTTCGTGGTAGATGCGGATGCCG 2494004 28 100.0 32 ............................ TGGGACGCGATGGGCTCGATCGACGGCCGGCT 2494064 28 100.0 32 ............................ AGCTGACCGTGATGGCCCAGCCGTATGTCGAC 2494124 28 100.0 32 ............................ ATACACCGGATCATTGCGGCGCCGCTCTCGGA 2494184 28 100.0 32 ............................ CAGGGCAACGTCGCCACGGAGTGGGGCACGGC 2494244 28 100.0 32 ............................ TGGGCGGGCCGGATTGGAGTCGGGATGATTTC 2494304 28 100.0 32 ............................ GAGATCAAAACGAAGCTGCCCAAGTACCAGGT 2494364 28 100.0 32 ............................ AGTGTTCGGGCCAGACGTCGCAGTGCTCGGGC 2494424 28 100.0 32 ............................ ACTTCGGCGCGATCCAGTCGATCGCCAGCAGC 2494484 28 100.0 32 ............................ TTGAACTGCATATCAGCTCGACCGCGCTGACC 2494544 28 100.0 32 ............................ ACTGAGTTCTCCAGCAGCTACGCTTGGATTCA 2494604 28 100.0 32 ............................ ATTTCGGCATTGCCACCCCCGCTGATCGTTAC 2494664 28 100.0 32 ............................ TGCCGGCGAATGCTTTGGCTGACTTGCGGCTG 2494724 28 100.0 32 ............................ GTAATCTGCCGTGTGGTGTAGGCGTGGATGAT 2494784 28 100.0 32 ............................ AACATCGACGCCCAGGAATCCGCCGCCACTTT 2494844 28 100.0 32 ............................ CTTCGCCGGTGCCGGCGGGTTCAGCACCGGCG 2494904 28 100.0 32 ............................ GTGAGCAGCAGAAAACCAACCGCAACACTAAG 2494964 28 100.0 32 ............................ AGTACGAGGCGCTGACCGGTGCTCGCCCCGAC 2495024 28 100.0 32 ............................ AAAGCCATCGGTAACGCCGTTATAGACCTGCT 2495084 28 100.0 32 ............................ CAGATCGCTGACTCTTCGGCCCAGGTCCAGGC 2495144 28 100.0 32 ............................ GCGGCCGGTGGCGCCCTTCACGGTCTGTCCGG 2495204 28 100.0 32 ............................ TGGAGCGCGGCGAATTGCTCGGGCGTGAAGTT 2495264 28 100.0 32 ............................ CACTGAACGCGCCCTTCGAGGGTGTCCTTGTC 2495324 28 100.0 32 ............................ TCGCCCAGCGCCTGGGGCACATGCTGACCGAC 2495384 28 100.0 32 ............................ TCGAGCGGCTTCGGGTCGGTCAGCAGCAATGT 2495444 28 100.0 32 ............................ GGCTCGGTGGAGTAGTTCGGCGAGGCCGACAC 2495504 28 100.0 32 ............................ TCGAAATCGTGGCGCAATACCTCACTGGGCTC 2495564 28 100.0 32 ............................ GCGTCGGCATCGCGCACCATCGGGTCGGCCGA 2495624 28 100.0 32 ............................ AGTGCCCCAGTCGTAGATCTCGATCGTCTCTC 2495684 28 100.0 32 ............................ TTGACGGCCGCCAATGCCTCGTCGAAGGCGCT 2495744 28 100.0 32 ............................ AGTCGGCGAGCTGGCGGTTGACGTCGGCCAGG 2495804 28 100.0 32 ............................ TCGAAGGGGGCGTCGGCGATGTTGAAGGCGAG 2495864 28 100.0 32 ............................ ATGCCGCGGTGTAGCGGTAGATCAGCGCGATC 2495924 28 100.0 32 ............................ ATGACAACAGTCTCCAGGTCGGCGTCGTCGAA 2495984 28 100.0 32 ............................ GACCTCGATGCCGCTGGTGTCGCTGAGATCGA 2496044 28 100.0 32 ............................ TGCAGACGCTGGACGCTCATCTGCAACGCATC 2496104 28 100.0 32 ............................ TACGCGACGAACCGCAACGTCAGCGGCGTCGC 2496164 28 100.0 32 ............................ GCGCGAGGCTTCCATGGTCTTCTCGACATTGA 2496224 28 100.0 32 ............................ ACCGATAGTCAGGGCCTGCCGTACATCCAGTT 2496284 28 100.0 32 ............................ TTGCCCTGCCCCGGCAGCCGGATGCCATCGGC 2496344 28 100.0 33 ............................ TCCCGCGATCTGGCCGTTGGTCAGCAGCCCCTT 2496405 28 100.0 32 ............................ GCTCGCAGTCGTTCCAGCCGGCCCACCACCAG 2496465 28 100.0 32 ............................ TTGGCGGCGTAGGCGTTGTTGCGGACGGCGTT 2496525 28 100.0 32 ............................ AAGGCGATTGTGACAGGCCCGGTCGGCAAGGG 2496585 28 100.0 33 ............................ ATGGCTCTCGTCGGGCAGGTGGGCCAGTACCGT 2496646 28 100.0 32 ............................ TGGAGTCACGAAGCCGTGCGCGAAGCCGGGTC 2496706 28 100.0 32 ............................ ATCAGATCGGCGGTGACTTCCTTGAGCGGGTC 2496766 28 100.0 32 ............................ ACCCCCATGATCAGAGCCAGCGTCACCACCAC 2496826 28 100.0 32 ............................ AGCGTCGGGAAGCGGTGCGGCCACACGGCCCG 2496886 28 100.0 32 ............................ GATGATGCCGGCAACCTCGCCGCCTTCCTTGA 2496946 28 100.0 32 ............................ TACGTCGACTCGAAGGTCGGCTACACCGCCAC 2497006 28 92.9 0 .......................GT... | ========== ====== ====== ====== ============================ ================================= ================== 85 28 99.9 32 GTTCACCGCCGAGCAGGCGGCTTAGAAA # Left flank : CGCTGATTGCCAATATTCGAGAGGCTCCTTCCTTGCTCGAGCAGGCAGTCATCCACTACCCCCGCTCGGTACCAGAGGACTACGCCGGCTCATGGAGCATCTACCAGAGGTTTCGCATTCCCTCGCGGCGTGCGGAGCGTATCCCGGGACGCTCGGTGCGCCTCAAGCGAGTCCAGGAGGCCAATGCCCGGGAGCTCCCCTTCTTCCAGATGAAAAGCGACAGTAACGGGGGACGGTTCCGGCTTTACTGGTCAGTACAGCCCTACACGGGCAGCGAGCCGAAGGTACGGGAATCGACCCCCGACTCCTGGGGGCTCTCCACCACGACAAATCCGGTGCCCTTGCCTGACATCACGTAAGATCAAGCATACCCTTTTTTCGAGCGTCTCTTTCACCCCCTGTAAAATCAGAAACTTGCAAGGCGGCTCGAAAAAAGGGTCTTTGGCTCTTTAATAGCGCAATCACTTGATTATATTGAACATAGTTCGCTCGCCTCACTA # Right flank : AAACTGATAAGACTTTTTCGCGATTCATTGCCCCTCAAAACTCGATCCCCACCCCGGCATACACCGTGCGCCCCGGCGCCGGGTCGTAGTAGCGCTCGTGGCTGGCGTTGATGATCACGTTGGCGTAGTGCTCGCGATCGAACAGGTTGCGCACCCCGGCGTAGGCCTCGAGCACGGTATCGCCACCCAGAGCCCAGCCGTCGCCGGCGCGCAGGTCGACCAGCCAGACGTCGTCGATCGCCACCTCGTTGGCGTCGTCGGCGACCATCGAGCCGATGTACCGGGTCTCCAGGGTGGCGAAGCGCCGGTCGAATCCCTGCCATGACAGCCGATTGACCCAGGTCCGCTCCGGCACGCCGGGGATGCGGTTGCCATCAAAATCCTGCCCGTCGACGCGGTAGTCGTCGAATTCGTAGCGCGCCAGGGTCAGGGCGCTGTCGACTCGCCAGTTCGGGGTGAACTGCCAGCCCAGTTGAGCCTCGATCCCCTCGCGGGTGCTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCGAGCAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.50,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //