Array 1 45159-43804 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACWJR010000001.1 Streptococcus agalactiae strain 453 NODE_1_length_271842_cov_16.9625, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 45158 36 100.0 29 .................................... CGATAATTATGACATTATCATGATTGAAG 45093 36 100.0 30 .................................... AAAAAATAAATGACTTTAAAGCACTTGGAG 45027 36 100.0 30 .................................... TAGTAGCCATTATTATTATGGCTTTTATTT 44961 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 44895 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 44829 36 100.0 30 .................................... ACATAACGTTCAAAAGTTTCCACTAATAGC 44763 36 100.0 30 .................................... TCAAACAACATTGGTGATCTTATTGCGGTA 44697 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 44631 36 100.0 30 .................................... ACGATAATTATGACATTATCATGATTGAAG 44565 36 100.0 30 .................................... ATTTTTACACGAGTGCTAGAAAACGGGGCA 44499 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 44433 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 44367 36 100.0 30 .................................... ACTCTAAATGATAGTTATGAGTTAAATGTT 44301 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 44235 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 44169 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 44103 36 100.0 30 .................................... CAAATTACAGTTTCGACTGATTATGGAAAT 44037 36 100.0 30 .................................... ATATGTTCCACTCTATGAATTTAGGCTCAT 43971 36 100.0 30 .................................... TTTTTACCAATGCTTCCATATCGCTTATAT 43905 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 43839 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : AAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //