Array 1 4941-4444 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QKXY01000148.1 Staphylococcus felis strain F19 k127_365, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      4940	    36	  88.9	    29	...C.......G.......A.....A..........	ATAAGCATGTGACTAAGAAAAGAGGAATA 	
      4875	    36	  97.2	    30	A...................................	TCCATGCCTCTGAACAGCGTGATGCTTGTA	
      4809	    36	 100.0	    30	....................................	AACACAATTATGAGTTAATGTCGTAGTAGT	
      4743	    36	  97.2	    30	........G...........................	GTCAATCCACCGCCGCGTACCGCATCATAA	
      4677	    36	  94.4	    30	........G................A..........	CGACAGAAGTTTATGACACTTCTACAGCTA	
      4611	    36	  97.2	    30	............C.......................	TGATGAGATGAATTTAAAAGCACCTTATGT	
      4545	    36	  97.2	    30	.........................A..........	ATGATGTACGTACCATGTACATTGTCCCCA	
      4479	    36	  88.9	     0	..............T..........T......T.C.	|                             	
==========	======	======	======	====================================	==============================	==================
         8	    36	  95.1	    30	GTTTTAGAACTATGATTATTTAGAAGGAAGTAAAAC	                              	       

# Left flank :   TAAGTGAAATTAACAAAAGGAAATTATTTATCGATTTACTTAAAGACGATGATAAAGAAAATGTATTACTTATATTGTATCCAGAAGCATTTTTGGGGCTCAAAGATATTCAAAGATTTATACAATTGATTAAAAGTTATCAACTCACAACCATTATAATTACAAATCATCCATCTATTATCATTGAGGAAGAAAATGTTTATTTATGCAAAAGCAATAAAGAGTGTCACTCAATAAAAGATATAAGGGAAGATCTAGAAATTCTTATGCCACAAGAAACAATTAATGACAAAACGGTTAGAATGATTGCTTATCATGAATTCATAGGTACAGATTTAAAAGAACTAGCACGATATTTTGAGTTTATTAATGATTACAATTAAGATATAATTGAATTTACTATGATAAATAAAAAACAACAAGCTTTATTTAATGTTTAACTTCTTAACTAAAAAGCTAAAACCTCAAAATGGTAAAAACTATAGTGTGTATTTTGAATT
# Right flank :  ATTTTTTCTGAATTTTTAGATATAATGATGATACTAGAATGACCAATTGATAATCAATAATCGAGAAATCTTAATGATACATGTCTTTTCTTTTCATTGATATAATGAAATGATATAGTCAAATATTTTTTAGAGAAGATTGTTTTATTTTATTAAGAAAGGGGAAGTTCGATGAAGTCTATTATTGCAAAACACGCTTTTAAATTGTCAGATGGGAATTTATTTGAAAAAGTGACACGGGAAAAACCAATAGTGAATGCTCATGAAGTAGGAATAGCTGTTCATGCATCAGGTGTGAATCCGATTGATACAAAGACGCGTCAAACACCACTTCAGACTGAAGCACGTGTATTAGGATATGAAGGAGCAGGTGTTGTTGAAGCAGTAGGTGAAGATGTGACACGTTTTAAAGTAGGGGATCGTGTGATGTTTGTCGGTGCACCTAAATGGGAAGGGTCGAATCAAACTTATCAAGTATTAGATGAAGCGTATATGACGCA

# Questionable array : NO	 Score: 3.80
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.29,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAACTATGATTATTTAGAAGGAAGTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC with 92% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,-0.20] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [6-6] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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