Array 1 2181462-2185411 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT604998.1 Propionibacterium freudenreichii isolate PFRJS12-1 chromosome I, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 2181462 36 100.0 37 .................................... CCTCGTGAAAATCGCAGCCCTGCTCCACATGCCCCCC 2181535 36 100.0 37 .................................... GGCGAGGTCGGGCTGCAGTACGGGAACCAGCGCAAGC 2181608 36 100.0 39 .................................... AGGTCACAGGCGAACCTGCGCACGGTGATTGACTTCCAG 2181683 36 100.0 37 .................................... ATCTCGACGTGGTCGAAAGTCGGATTGTGGCCTGACC 2181756 36 100.0 38 .................................... TGTTTCCAGCGGGATTGCAGTGTGCAATTTCATGACCC 2181830 36 100.0 38 .................................... GAAGCTGGGCGGCACGCTGTCTGGCTGGGGCAGCTCGA 2181904 36 100.0 36 .................................... AGCCGGTCGACATTGCAACCAACGTTCTACGAGGCG 2181976 36 100.0 38 .................................... ACACGATCCCCGGGGCGATGACTCCCATGCCCGCTACG 2182050 36 100.0 36 .................................... GGCGGCCCGTTCAACATTCCGGGGATTGCCTCGCTG 2182122 36 100.0 35 .................................... GCGGGTCGCGACAACGTGGCCGACGATGACCCCAG 2182193 36 100.0 38 .................................... TGTTCTTACAGAAGTTGGATACACGCTAAAGTTCTAGG 2182267 36 100.0 40 .................................... TCGAAGTTGGACGAGGACAATCATCGGGCAATTCTGGGAA 2182343 36 100.0 40 .................................... TTGCACACCTAACATGGTTGTGATGGCGGACAATCAGCCT 2182419 36 100.0 35 .................................... TCACCCCCGGTTCGCCTTAAGCAGCCGCCACCGCT 2182490 36 100.0 40 .................................... ACCATGACTTTCTCGGATGCCTGAAGTGGCGCACCTTCGG 2182566 36 100.0 35 .................................... TGCCGCTGGTCCACCATCACGTCGTGGCCGAGCAT 2182637 36 100.0 37 .................................... TGGTAATACATTAGGACTGTGGCCTGTAGTTTTACAG 2182710 36 100.0 36 .................................... AGCACAAGTGCCCGGCCTGCCATTACGACACGCCGG 2182782 36 100.0 37 .................................... GATCCGATTCCCGCAGCGCCGCTGATCGGTGTCGCCA 2182855 36 100.0 36 .................................... TTCATTGACAGAGTTCTCCATTGCATCAACATCCTT 2182927 36 100.0 37 .................................... AGTCAGGATGCATGGGTGCGTAGCCACATGGATGAAA 2183000 36 100.0 35 .................................... AATTTGTGGGGGTTCCCGGTGATTGTGACTACCGC 2183071 36 100.0 36 .................................... GAACGGATCGATCGACTTCAACCCGAAATTCTTCAA 2183143 36 100.0 36 .................................... CACAACCCGCCCTACTGGCGCACCCGGCAGTCAGCT 2183215 36 100.0 40 .................................... CCTACCAGCCCAATGTATACGGACCGATCGGATGGTCATC 2183291 36 100.0 37 .................................... TCGTCGGGCGGCATGGTGCGCGGCGACCGCACCCAAA 2183364 36 100.0 35 .................................... ATTAGTAAGGCGCCTACGACCGTGGATGTTTCCGT 2183435 36 100.0 34 .................................... CCCGAGGCGAGTTCCCTCACGTTACTGAGCGTGG 2183505 36 100.0 41 .................................... TCATGAGAGTTGAGCTCTAGCGGTACCCGTAACTTCAGAAG 2183582 36 100.0 35 .................................... CCGGCAGCGGTGGTGATGTCGTCCACATTGGCGGT 2183653 36 100.0 34 .................................... GTCGAAGGAATCGAGCAGCGCTCGGCATCCGACG 2183723 36 100.0 37 .................................... AAAAAAAGCTGCATCCCAGCTGCCAACCTCCCCTGGG 2183796 36 100.0 34 .................................... ATTCCACATACCCGTCAGGCAGCTTGGAGATGCG 2183866 36 100.0 40 .................................... ACCCGCGTCACCCTGCTCGAAGACCCCGACGAACCGGACC 2183942 36 100.0 35 .................................... CTGTCGACCTCGACGGTGGAAACCGACTGCACAGG 2184013 36 100.0 36 .................................... CAGGGCGTGGTGAAGCTGTTCTGGCAGAATCCTGCC 2184085 36 100.0 35 .................................... TTCGGGAAGCTCACAGAATCATGGCGCACGGTGGA 2184156 36 97.2 34 ...T................................ GTCGAATTCAACATTTCTGCCAAGCTCCAGGGTG 2184226 36 97.2 39 ....................A............... TTACCGGTCTTACCCTCTAGCGCCGTGGACGACCATACC 2184301 36 100.0 36 .................................... ACCCACTCGTTGTAAAATCCACCGACCTCGGCGGAG 2184373 36 100.0 25 .................................... GGCGCCGCTCGGGACGCTGCTCGGG Deletion [2184434] 2184434 36 100.0 38 .................................... ACTCCTTGTTGTTGGCAGTTCGTTTGGTTGGCCCTCGC 2184508 36 100.0 37 .................................... AAGTGGCCGGCGGGCAGGGTCCAGGCGGGCAGGTCCA 2184581 36 94.4 36 ..........TC........................ GGCGGCCGTTCCGATTGGTTTCCGCCGTTCGATAAG 2184653 36 100.0 36 .................................... CCAAAAGGGCAACATACAGTACATCCGCAACGAGGC 2184725 36 100.0 36 .................................... TCCGTCAGGTGCTTGAGGGTATGGGGCTGACGTTCT 2184797 36 100.0 36 .................................... GTGCGCATCAGATCACACGCCAGCAGTGCCGAGGGC 2184869 36 100.0 34 .................................... TTCGCGTCGGCGACCAGCGATCTGGCTGGTCCGG 2184939 36 100.0 40 .................................... GGATTCACCGAGGTGGCGTTGCAGTCGCGGGGTGCCCCGG 2185015 36 100.0 35 .................................... CACGATGCGCCGTGGGCGACACGACGCCTTTGGGG 2185086 36 100.0 36 .................................... CAGGGCGTGGTGAAGCTGTTCTGGCAGAATCCTGCC 2185158 36 100.0 38 .................................... CGCACCAAGGCCCCGGCTCGGCGAGGGACGGTTGCCGT 2185232 36 97.2 37 ......T............................. GTCATGGTGTGCGCACAGAAACCTAGAGTTCGGGCGG 2185305 36 97.2 35 ...................................A GCGAAAGAGCGATCATTCCGGGTATGGATCAAACC 2185376 36 97.2 0 ...................A................ | ========== ====== ====== ====== ==================================== ========================================= ================== 55 36 99.6 36 ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC # Left flank : ATATAGGAATGACGGTCAGATGAGCCGACGAGATTCCCATTGCTTTCTGATCGCCTACGACGTGCCCGATGACCGTCGTCGCACCAGGTTGGCCACGGTACTGAAGGGCTACGGGGAGCGTGTGCAGTACAGCGTATTCATGGTTGATTGTCCGCCGTCACACCTGCTGGTGCTACGCCACGATCTCACCGACGCGATGGATATTGATGAGGACTCGGTGGTGATCTGCGACCTGGGCATGTCCACGTCGGCAGACGCCCAACGCATCACCTGGTTGGGCGGTCAGAGGTACCAGAGCGGCGGACGCAGCATCATCATCTGACGACCAGCGGCTCTGCGGCCCGGTTGTCACGCGGAGCCGCTCGCGTGATGTTTCCCCTTGTCACAAGCAGATTGCGCTGAAGGGGTCATCAATCCTCCACGCGCGAGCCATCCTTCTTCAGCACCGCTCGCAGGCGGCCGATATAATGCCTAGTGGGAGCCCTGTTCCCACGCCCGCC # Right flank : CTTGCGCCAGCTCTCGGAGACGATGGCGCCTTGACGTGGCGTTGCCCCTCTCCCCGGGCGAAGCCCTCCACCCGTTCAACGTCCCGAAACTCACGGAACTCCCGCCGGCGCCGAGAGCTAGACTCGCCATGAGAAGGTGGGAGGTAGGGCAGACGCCCAGCTGACCCACCTTCCCTTTTTCGCACCCCCGGTGGCGCCAAGAGCCACCGATTCCGTCCAACCGCCCACCCTCTCGTCCACCCGCGCGAGGACCCGTCACCCCGATCAGCGCTCACTGACAAGGCCACGTGGCCGCGCACGAGCCCTAGGCGTTTCCGGACCTGACAGCCGCCATGACAAGGCGTTTTCGTCACGCACTGGCGATGCCGAGACGTGCCCCCACACAGCTCCCCCCGCTACGGTTAAATCCGGCGGGGCCGGCAAGGCATGCCCCCTTCATTGAGGCTGACGCCAATAGATGGGCATTTGCGACACCCGCCAAAGTCCCTCCTCACGGAGGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.30,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //